Dbfetch
LOCUS NM_001019819 2871 bp mRNA linear PLN 14-JUL-2022 DEFINITION Schizosaccharomyces pombe HECT-type ubiquitin-protein ligase E3 Pub1 (pub1), mRNA. ACCESSION NM_001019819 VERSION NM_001019819.2 DBLINK BioProject: PRJNA127 BioSample: SAMEA3138176 KEYWORDS RefSeq. SOURCE Schizosaccharomyces pombe (fission yeast) ORGANISM Schizosaccharomyces pombe Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces. REFERENCE 1 (bases 1 to 2871) AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 2 (bases 1 to 2871) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (13-JUL-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2871) AUTHORS Wood,V. CONSRTM The Schizosaccharomyces pombe Genome Sequencing Consortium TITLE Direct Submission JOURNAL Submitted (29-JUN-2007) European Schizosaccharomyces genome sequencing project, Sanger Institute, The Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_003424). On Dec 10, 2012 this sequence version replaced NM_001019819.1. FEATURES Location/Qualifiers source 1..2871 /organism="Schizosaccharomyces pombe" /mol_type="mRNA" /strain="972h-" /db_xref="taxon:4896" /chromosome="I" gene 1..2871 /gene="pub1" /locus_tag="SPAC11G7.02" /db_xref="GeneID:2541818" CDS 266..2569 /gene="pub1" /locus_tag="SPAC11G7.02" /EC_number="6.3.2.-" /codon_start=1 /product="HECT-type ubiquitin-protein ligase E3 Pub1" /protein_id="NP_594396.1" /db_xref="GeneID:2541818" /db_xref="GOA:Q92462" /db_xref="InterPro:IPR000008" /db_xref="InterPro:IPR000569" /db_xref="InterPro:IPR001202" /db_xref="InterPro:IPR024928" /translation="MSNSAQSRRIRVTIVAADGLYKRDVFRFPDPFAVLTVDGEQTHT TTAIKKTLNPYWNETFEVNVTDNSTIAIQVFDQKKFKKKGQGFLGVINLRVGDVLDLA IGGDEMLTRDLKKSNENTVVHGKIIINLSTTAQSTLQVPSSAASGARTQRTSITNDPQ SSQSSSVSRNPASSRAGSPTRDNAPAASPASSEPRTFSSFEDQYGRLPPGWERRTDNL GRTYYVDHNTRSTTWIRPNLSSVAGAAAAELHSSASSANVTEGVQPSSSNAARRTEAS VLTSNATTAGSGELPPGWEQRYTPEGRPYFVDHNTRTTTWVDPRRQQYIRSYGGPNNA TIQQQPVSQLGPLPSGWEMRLTNTARVYFVDHNTKTTTWDDPRLPSSLDQNVPQYKRD FRRKLIYFLSQPALHPLPGQCHIKVRRNHIFEDSYAEIMRQSATDLKKRLMIKFDGED GLDYGGLSREYFFLLSHEMFNPFYCLFEYSSVDNYTLQINPHSGINPEHLNYFKFIGR VIGLAIFHRRFVDAFFVVSFYKMILQKKVTLQDMESMDAEYYRSLVWILDNDITGVLD LTFSVEDNCFGEVVTIDLKPNGRNIEVTEENKREYVDLVTVWRIQKRIEEQFNAFHEG FSELIPQELINVFDERELELLIGGISEIDMEDWKKHTDYRSYSENDQIIKWFWELMDE WSNEKKSRLLQFTTGTSRIPVNGFKDLQGSDGPRKFTIEKAGEPNKLPKAHTCFNRLD LPPYTSKKDLDHKLSIAVEETIGFGQE" ORIGIN 1 ctcctttcag ccaacaccac gcgaaatccg acggatttca aaattgtgcg ctgaaagcac 61 gaatttgatt aaggattcct tttgtagttc ttttttattt atttcgttcc cgaaaaaagc 121 gtttttgtat caaatagaaa ggataaaacg gccttaattg aaagtttttt ttgcaagcac 181 aaatacttga ctttctttgg gaaattggct tttttttatt atccaaaagc aacgctggtt 241 tgaaatttta ccatcttttc cccctatgtc aaactcagct caatctcgtc gaattcgagt 301 aacaattgtt gctgctgatg gcctttacaa acgagatgtg tttcgttttc ctgacccgtt 361 tgcggtacta acagtggatg gtgagcaaac acataccaca actgctatca aaaagacgtt 421 aaacccttat tggaatgaga cttttgaagt taatgttaca gataatagca ccattgcgat 481 tcaggtgttc gatcagaaaa aatttaagaa aaaaggccaa ggctttctag gagtgataaa 541 tcttcgtgtt ggagatgtgc tcgatctcgc cattggaggt gatgaaatgt tgacccgcga 601 tttgaaaaag tcaaatgaga atacagtagt tcatggcaag ataatcataa acttatcaac 661 gactgcgcag tcaaccttac aggttccatc cagtgcagca tcaggtgcac gtacccaacg 721 tactagcatt accaatgacc cgcaaagctc acaaagtagc agtgtgtctc gtaaccctgc 781 ttcctctcgt gctggttcac ctacccgcga caacgcacct gctgcttccc ctgctagttc 841 agaacctcgc acatttagtt catttgaaga tcaatatggg cgccttcctc ctggatggga 901 aagacgtacc gataatcttg gccgaactta ttatgtagat cataatacaa gaagcacaac 961 gtggattcgc cccaacctaa gttctgttgc cggagcagcc gcagccgaat tgcatagtag 1021 tgcatcgtct gcgaatgtta ccgaaggtgt tcaaccttcc tctagcaatg cagctcgtcg 1081 tacagaagct agtgttttga cctctaacgc tactactgct ggttcaggag agcttccacc 1141 gggatgggag caaaggtata caccagaggg tcgaccctac tttgtggatc ataatacgcg 1201 aactactact tgggtggatc cgcgccgtca acagtacatt cgttcctatg gcggtcctaa 1261 taatgctact attcagcaac aacctgtctc tcaacttggt cctttgccaa gtggttggga 1321 aatgcgtctt accaatactg ctcgtgtata ttttgttgat cacaatacca agactaccac 1381 ttgggatgat cctcgtttac cttcgtcgtt agatcaaaac gttcctcaat acaaacgtga 1441 tttccgtaga aagttgattt atttcctttc gcaaccagct ttgcatcctt tgccagggca 1501 gtgccacatt aaagtgcgta gaaatcatat ctttgaagat tcgtatgcgg aaattatgag 1561 acaatctgca accgatttga aaaaacgttt gatgattaag tttgatggtg aagatggttt 1621 ggattacggt ggattatccc gtgaatactt ctttttgtta tcacatgaaa tgttcaaccc 1681 cttttattgt ttatttgaat actcttcggt tgataattat acgcttcaaa ttaatcctca 1741 ttctggcatt aatccagagc atttgaacta tttcaagttc ataggccgag tcattggtct 1801 cgcaattttc catcgtcggt ttgttgatgc ctttttcgtt gtttcttttt acaaaatgat 1861 tttacaaaag aaggtgacgt tacaggatat ggaaagtatg gatgcagagt attatcgaag 1921 tttagtctgg attttggaca acgatataac cggtgttctt gatttgacct ttagtgtcga 1981 agacaattgt tttggcgagg ttgttacgat tgatttgaag ccgaatggtc gaaacattga 2041 agttacagaa gagaataaac gcgaatatgt tgatttggtg actgtatggc gcattcaaaa 2101 acgtatagaa gagcagttta atgcatttca tgaaggtttt agtgagctca taccacagga 2161 actgattaac gtgtttgacg agagagaatt ggagttgttg attggaggca tttccgaaat 2221 tgacatggag gattggaaga agcatacgga ttatcgttca tacagtgaaa atgaccagat 2281 tattaaatgg ttttgggaac ttatggatga atggagtaat gaaaagaaat ccagactttt 2341 acaatttacc actggtacta gccgaattcc tgtcaacggg ttcaaagatt tgcaaggaag 2401 tgatggcccc cgtaagttta ctattgaaaa agctggtgaa cccaataaac ttcccaaggc 2461 ccacacctgt ttcaatcgac ttgatcttcc tccttatact tcgaaaaaag atttggatca 2521 taaattgtcc atagctgttg aagagacgat tggttttggt caggagtaaa atggatagct 2581 agctattgat tacttttgat atttgaacta ttggtgttta acagtgaaaa agaatttctg 2641 tgtaaagttt ccgaaattat tttttttttc tcatttgagt gaaaatactt ggatcatcat 2701 gttctacctt tgtgttctct actaccattt tccttcttct ttttatactt gtttgcaaac 2761 acatttcctc ttaatgctct tcgcacaaaa catataagtt aatttactat tattaagtta 2821 cgtactgcat aagtgatttt atatttatga aattaccgcc ctttttcaac a //