Dbfetch
LOCUS NM_001019543 5662 bp mRNA linear PLN 14-JUL-2022
DEFINITION Schizosaccharomyces pombe helicase Sen1 (sen1), mRNA.
ACCESSION NM_001019543
VERSION NM_001019543.2
DBLINK BioProject: PRJNA127
BioSample: SAMEA3138176
KEYWORDS RefSeq.
SOURCE Schizosaccharomyces pombe (fission yeast)
ORGANISM Schizosaccharomyces pombe
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
Schizosaccharomycetes; Schizosaccharomycetales;
Schizosaccharomycetaceae; Schizosaccharomyces.
REFERENCE 1 (bases 1 to 5662)
AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R.,
Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D.,
Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T.,
Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P.,
Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D.,
Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S.,
Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M.,
Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S.,
Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S.,
Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S.,
Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M.,
Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G.,
Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J.,
Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I.,
Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C.,
Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D.,
Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H.,
Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H.,
Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S.,
Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z.,
Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C.,
Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L.,
Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A.,
Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L.,
Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V.,
Ussery,D., Barrell,B.G. and Nurse,P.
TITLE The genome sequence of Schizosaccharomyces pombe
JOURNAL Nature 415 (6874), 871-880 (2002)
PUBMED 11859360
REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to
Cerutti L]]
REFERENCE 2 (bases 1 to 5662)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (13-JUL-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 5662)
AUTHORS Wood,V.
CONSRTM The Schizosaccharomyces pombe Genome Sequencing Consortium
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2007) European Schizosaccharomyces genome
sequencing project, Sanger Institute, The Wellcome Trust Genome
Campus, Hinxton, Cambridge CB10 1SA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. This record is derived from an annotated genomic
sequence (NC_003424).
On Dec 10, 2012 this sequence version replaced NM_001019543.1.
FEATURES Location/Qualifiers
source 1..5662
/organism="Schizosaccharomyces pombe"
/mol_type="mRNA"
/strain="972h-"
/db_xref="taxon:4896"
/chromosome="I"
gene 1..5662
/gene="sen1"
/locus_tag="SPAC6G9.10c"
/db_xref="GeneID:2541556"
CDS 542..5605
/gene="sen1"
/locus_tag="SPAC6G9.10c"
/codon_start=1
/product="helicase Sen1"
/protein_id="NP_594119.1"
/db_xref="EnsemblGenomes-Gn:SPAC6G9.10c"
/db_xref="EnsemblGenomes-Tr:SPAC6G9.10c.1"
/db_xref="GeneID:2541556"
/db_xref="GOA:Q92355"
/db_xref="InterPro:IPR024481"
/db_xref="InterPro:IPR026852"
/db_xref="InterPro:IPR027417"
/db_xref="PomBase:SPAC6G9.10c"
/db_xref="PomBase:SPAC6G9.10c.1"
/translation="MAENLSDQDCFEKLSSSKEGQHWFCSGLLTQYIQPTFFWFAHDE
TPSFKWVLNAYHERLRSCTSCIQAYYELRNESLAKGSYSFTGFSITDLQEKWNKWDII
RVLEDFKALEDETIDFTSLPCLIFETLLNPKLFTCKNIYKNAIDAFNGLLSDWCSNIF
LPGYLLFFYEASHPDVLEWVHSFFKENTEIRISSATVDAVFNTVVFESQNSSDSDCNF
VSISSPEFWERTYMFLELLPLQSITAACESILKDYLLNLVKTSESLSSQQMSCLRICC
NSSSFWSAADSFKEVSSFLKNLLKNVTATPFEVSDMNWAYIIASFFRTCLNDFVSVFP
EWLKGFVEEKRTIGFIIYSVLDALFDLLSLDYSSPSFLNNTLSLMNANSITILQDYPE
YMLKLRLHSLLYDIAFISWSHKAITKNPSFVFDPSYELSPFWKLDNLQEEKISDVLFS
KISSCCFAHDIEISENSTPSGTMVQFAELWQVMSEYISGFLKGFSEKSSTEISNMLGD
SSKFDTVVSFLLSPTQPLYVSAFHIVQIITNCTKNRNEALKKLVAMDFRGIVHGLADA
VLNWQSILSFFPALRIMRFLSITNKSLSSDNSAFTENDIPTLGAYWQCIWNILDLVFS
NVARWSLNNPADTVKALMKLTLKFVDDLFQNDGIFIKLLAKFDSLILLGETSESLFSF
IMWLKINDLELRGIVINSLCKLFTKFSNFDYLFEDRTVTFLTDFIIRKQKAHLSADQC
KQLANVLTQASPEAKTVLEQHRLSEMRKTKKQTELTNSAHVIKPSPTPQITVKQNTTK
SSSAPRMGMLEQLKQEYLTKRNFESKLKSSAVSSRKPTFNEVKPANLLAEDLSDNEDD
IDRKQGLFSLAKANKIPEIRQQERRQVQLLSNSTIKMHPSQIRMMTNRNVANVKARLF
PSMTDFYKEILSWEPANQSPNPVLKFHKLDGKIIDSFKTVEHYMEVLQPMIFMECWSQ
IQSTKLDLKFSPVEGIMVERTAVNNFVDIGVSVAPKDLYGYPLYDTEVVSLAFNKEDA
SSMKGLCCFAKVERIVRQTNGVLVVLRTLPSMEILNKLQGNCALWFLKLTNLATFTRQ
YAGIRGLPYFHLADDIIRARPCSQPVKHSSSEIKAAMKRYQVNEPQAKAIMCALDNNG
FTLIQGPPGTGKTKTIIGIISALLVDLSRYHITRPNQQSKSTESKQQILLCAPSNAAV
DEVLLRLKRGFLLENGEKYIPRVVRIGNPETINVSVRDLSLEYQTEKQLLEVNQGAID
LGSLQELTRWRDTFYDCIQKIEELEKQIDVARDVAEDTKSLGKELQNKINEKNLAEQK
VEELQSQSFTKNKEVDLLRKKAQKAILKQADVVCATLSGSGHDLVAHSSLNFSTVIID
EAAQAVELDTIIPLRYGAKKCILVGDPNQLPPTVLSKKAASLNYSQSLFVRIQKNFSN
QMCLLSIQYRMHPDISHFPSKKFYDSRLEDGDNMAEKTQQVWHVNPKFTQYRLFDVRG
KERTSNTMSTYNLEEVEYLVNMVDELLNKFPDVNFTGRIGVITPYRSQLHELRRAFKV
KYGKSFMSTIDIQTVDGFQGQEKDIIFFSCVKSYSKHGIGFLRDFRRLNVALTRARSS
LLIIGNMETLKTDDLWGSLVDDALSRKLVESPHIDSEGRLITISRTSEKRMKNEEFVE
PPSKKLANSEPSKEIRQRS"
ORIGIN
1 aacaaatcct tagtattggt gaatttggga ggaaccaact acgccctttg gaatagagat
61 ttggaaacac gtcttgtttc ttggcgattt gagctgttca taacaatata tttcttcttc
121 taaatttcct tgagttatga aatttttatg aaagttttaa ctttcacata gtgttaaaag
181 gtctcctctc atcgctgtag cgtccgaaac gttatttgtt attttattct tgagatcttt
241 tgtaaataaa attttattta cgttacgatt tacgtctgga ttagggtttt ggttttggca
301 cttgcaatat tagatttttc ctgggttttt ggtctatcgg tgaaacaacg tttatttggg
361 tccatttaat catacattta ttagaaaaaa gtctttaaaa aagagacaat actcacttac
421 ctacatttct tttgtttgtt tttttgtttt cactctttta tcagaaaaac aggttgaaat
481 ttccaaaaaa aatattattt acttcataac attaaaaaaa tattaaattt gattgttaca
541 aatggcggag aatcttagcg atcaagattg ttttgaaaaa ttatcgtcta gtaaagaggg
601 tcagcattgg ttttgctcag gactactgac tcagtatata caacctacct tcttttggtt
661 tgcacatgat gaaactccga gctttaaatg ggtattaaat gcctatcatg agcgtttacg
721 ctcttgtact tcttgtatac aagcttatta tgaacttcga aatgaatccc ttgcgaaagg
781 ttcatattct tttactgggt tttcaattac cgatttacag gaaaagtgga ataaatggga
841 tattatccgt gtcttagagg acttcaaggc cctggaggat gaaacaattg acttcacgtc
901 tttgccttgc ttaattttcg aaaccctctt gaatcctaaa ttgtttacct gtaaaaatat
961 ttataaaaat gcaatagatg catttaatgg tctactttca gattggtgtt ctaatatatt
1021 tcttcctggt tatttactat ttttctatga agcttcccat cccgatgttt tggaatgggt
1081 tcatagcttt tttaaggaaa atactgaaat aagaatttct tctgctacag ttgacgccgt
1141 ttttaatact gtagtgtttg aaagtcaaaa ttcctctgac agtgattgta atttcgtgtc
1201 tataagtagt cctgaatttt gggaacgtac ttacatgttt ttagaacttc ttcctttaca
1261 atccattact gctgcatgtg agtccatttt aaaagattat cttttaaatt tggtaaagac
1321 ttctgaatct ctatcctctc aacaaatgtc ctgtcttcga atttgctgca attcctcatc
1381 cttttggtct gccgctgatt catttaagga agtgtcttct ttcttaaaaa acttgctaaa
1441 aaatgttaca gctacacctt ttgaagtatc tgacatgaac tgggcttaca ttattgcttc
1501 attttttcgc acatgtttaa atgactttgt tagtgttttt ccggaatggc ttaaaggatt
1561 tgtagaagag aagcgtacta taggtttcat catttattcg gttttggatg cgttatttga
1621 tctattatcg ctagattaca gctctccttc atttcttaac aatacactat cgttgatgaa
1681 tgctaatagc atcactattt tacaagatta tccggagtac atgctgaaac tcagattgca
1741 ctctttactt tatgacattg catttataag ttggtctcat aaggcaatca ctaaaaatcc
1801 ctcatttgtt ttcgatcctt catatgaact ctctcctttt tggaagcttg acaatctaca
1861 ggaagaaaaa atatctgacg tccttttctc taaaatttca agttgttgct ttgcccacga
1921 tattgaaata tccgaaaatt ctacaccgtc tggaaccatg gtgcagtttg ctgaactatg
1981 gcaagtaatg tcggaatata tcagtggatt tttaaaagga ttttctgaaa agtcgtctac
2041 tgaaatttca aatatgctgg gagattcttc aaaatttgac acagttgtat catttctgtt
2101 atctcctact cagccgctct atgttagtgc ttttcatatt gtccaaataa ttaccaattg
2161 cactaaaaac aggaatgagg ctcttaaaaa actggttgca atggattttc gaggaattgt
2221 gcatggtcta gctgatgctg ttcttaactg gcaatctatt ttaagcttct ttcctgctct
2281 tcgaattatg agatttttga gcattactaa taaatcctta tcatctgaca attctgcttt
2341 cacagaaaat gacataccta ccttgggtgc ttattggcag tgcatctgga acatattgga
2401 tttagttttt tccaacgttg ccagatggtc gcttaacaat cctgctgata cggttaaagc
2461 attgatgaaa ctaacactta agtttgttga tgatcttttc caaaatgacg gaatcttcat
2521 aaagctcctt gctaagtttg atagcttgat tctgttaggc gaaacttctg aatcattgtt
2581 ctcttttatt atgtggctta aaataaacga tttagaatta aggggaattg tcatcaatag
2641 tttatgcaag cttttcacta aattttcgaa ttttgactac cttttcgagg atcgcaccgt
2701 taccttcctt acagatttta tcattagaaa gcaaaaagca catttgtctg ccgatcaatg
2761 taaacagctt gctaatgttt tgactcaggc tagccctgaa gcaaagactg tacttgagca
2821 acaccgactt tcggaaatgc gaaaaacaaa gaaacaaaca gaactaacta atagtgcaca
2881 tgtcataaag ccaagtccta cacctcaaat tactgtgaaa cagaatacta ctaaatcttc
2941 aagtgcccct cgcatgggaa tgctggagca actaaagcag gagtatttga ctaaacgaaa
3001 ctttgaatct aaactcaaat catctgctgt atcttcaaga aagccaacat ttaatgaagt
3061 caagccagct aaccttttag ctgaggacct ctcagataat gaggatgata ttgatagaaa
3121 gcaaggatta ttctctcttg ccaaagcaaa caaaattcca gagatacgcc aacaagagcg
3181 acgacaagtg cagctattat ctaattccac tattaagatg catccttcac aaattcggat
3241 gatgactaat aggaacgttg caaatgttaa agcacgctta tttccaagta tgactgactt
3301 ttacaaagaa attttgagct gggaaccagc taatcagtca cctaatcctg tactgaaatt
3361 tcataagctt gatgggaaaa ttattgatag ttttaaaacg gttgaacatt atatggaggt
3421 tttgcagccg atgatattta tggaatgctg gagtcaaatt cagtcaacaa aattggattt
3481 aaaattctct cctgttgaag gaatcatggt tgaaagaacg gccgtcaata attttgttga
3541 tataggagtc tcagtggctc ccaaggatct atacggttat cccttatatg atacggaagt
3601 agtttcgttg gcttttaaca aggaggatgc ttcatcaatg aaagggctgt gttgctttgc
3661 gaaagttgaa cgcatagtta ggcaaacgaa tggagtttta gttgtcttac gtacgttacc
3721 atctatggaa attttgaaca aattacaagg taattgtgct ttatggtttc taaaattaac
3781 aaatttggct acattcactc gccaatatgc cggcataaga ggtttaccat actttcatct
3841 agcagacgat attattcgtg cgaggccttg ttctcaacca gttaagcatt cttcaagcga
3901 gataaaagca gctatgaagc gatatcaggt taacgaacct caagctaagg ccattatgtg
3961 cgctcttgat aataacggat ttactttgat tcaaggtcct cccggtactg gtaaaacaaa
4021 aacaattatt gggattattt cggctttgct cgtggacctt agtcgatacc acataacacg
4081 accgaatcaa caatcgaaga gcacagaatc aaagcaacaa attttacttt gtgcacctag
4141 taatgcagcg gttgacgaag ttttattgcg tctaaaacgt ggtttccttt tagaaaatgg
4201 tgaaaaatat ataccaagag ttgtccgtat aggtaatccg gaaaccatta atgtttcagt
4261 tcgcgatttg tctttggaat atcaaactga aaaacaactt ttagaagtca accaaggtgc
4321 tattgacctt gggtcgctcc aggaactaac tcgctggcgt gatacgtttt acgattgtat
4381 tcaaaaaatc gaagagcttg aaaaacaaat cgacgttgcc cgtgatgttg ctgaagatac
4441 taaatctttg ggaaaagaac tccaaaataa aataaatgaa aaaaatttgg cagaacagaa
4501 ggttgaggaa cttcaaagcc agagtttcac taaaaacaaa gaagttgatc ttttgagaaa
4561 gaaagctcag aaagcgatct taaagcaagc agatgttgta tgcgccacgc tttccggaag
4621 tggtcacgat ttggtagcac atagttcttt gaacttttct accgtaataa tcgatgaggc
4681 tgcacaagct gttgagcttg ataccatcat tccccttcgt tatggtgcaa agaaatgtat
4741 attagtaggt gatccaaatc aattaccccc tactgtatta agtaagaagg cggccagtct
4801 taattattcg caatcactat tcgtgcgtat tcaaaagaac ttttccaatc aaatgtgtct
4861 attgagtatt caatatcgta tgcacccgga tattagccac ttcccgagta agaagttcta
4921 cgattcacga ttagaagatg gtgataatat ggctgaaaaa acacaacagg tttggcatgt
4981 taatcccaaa tttacacaat atcgtctttt tgacgttaga ggtaaagaga gaacgtctaa
5041 tactatgtcc acgtataacc tggaagaagt cgagtatctc gtcaatatgg tcgatgaatt
5101 actaaataaa tttcccgacg ttaatttcac cgggcgaata ggtgttatta ccccatatcg
5161 atcccaactt catgaacttc gtcgagcatt taaagttaaa tacggaaaat cgtttatgtc
5221 gactattgac attcagactg ttgatggttt tcagggtcag gaaaaagaca ttatcttctt
5281 ttcatgtgtt aaaagttatt ctaaacatgg cattggtttc ttaagagact ttaggcgatt
5341 gaatgttgca ttaacacgtg caagaagctc tttgttaatc ataggaaata tggaaacatt
5401 gaaaacagat gacttgtggg gaagcttggt agatgatgca ctttctcgaa aactggttga
5461 aagtcctcac attgattctg aaggtcgctt gataactatt tccaggacat ccgaaaaacg
5521 tatgaagaat gaagaatttg ttgagccacc ttccaaaaag ctagcgaatt ccgagccttc
5581 taaagaaatc agacaacgat cataaacttt ctcttttttt ctgttttatt attaaagaat
5641 tgattagatt tttttttaaa ca
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