Dbfetch

LOCUS       NM_001019543            5662 bp    mRNA    linear   PLN 14-JUL-2022
DEFINITION  Schizosaccharomyces pombe helicase Sen1 (sen1), mRNA.
ACCESSION   NM_001019543
VERSION     NM_001019543.2
DBLINK      BioProject: PRJNA127
            BioSample: SAMEA3138176
KEYWORDS    RefSeq.
SOURCE      Schizosaccharomyces pombe (fission yeast)
  ORGANISM  Schizosaccharomyces pombe
            Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
            Schizosaccharomycetes; Schizosaccharomycetales;
            Schizosaccharomycetaceae; Schizosaccharomyces.
REFERENCE   1  (bases 1 to 5662)
  AUTHORS   Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R.,
            Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D.,
            Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T.,
            Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P.,
            Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D.,
            Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S.,
            Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M.,
            Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S.,
            Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S.,
            Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S.,
            Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M.,
            Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G.,
            Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J.,
            Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I.,
            Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C.,
            Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D.,
            Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H.,
            Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H.,
            Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S.,
            Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z.,
            Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C.,
            Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L.,
            Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A.,
            Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L.,
            Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V.,
            Ussery,D., Barrell,B.G. and Nurse,P.
  TITLE     The genome sequence of Schizosaccharomyces pombe
  JOURNAL   Nature 415 (6874), 871-880 (2002)
   PUBMED   11859360
  REMARK    Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to
            Cerutti L]]
REFERENCE   2  (bases 1 to 5662)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-JUL-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 5662)
  AUTHORS   Wood,V.
  CONSRTM   The Schizosaccharomyces pombe Genome Sequencing Consortium
  TITLE     Direct Submission
  JOURNAL   Submitted (29-JUN-2007) European Schizosaccharomyces genome
            sequencing project, Sanger Institute, The Wellcome Trust Genome
            Campus, Hinxton, Cambridge CB10 1SA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_003424).
            
            On Dec 10, 2012 this sequence version replaced NM_001019543.1.
FEATURES             Location/Qualifiers
     source          1..5662
                     /organism="Schizosaccharomyces pombe"
                     /mol_type="mRNA"
                     /strain="972h-"
                     /db_xref="taxon:4896"
                     /chromosome="I"
     gene            1..5662
                     /gene="sen1"
                     /locus_tag="SPAC6G9.10c"
                     /db_xref="GeneID:2541556"
     CDS             542..5605
                     /gene="sen1"
                     /locus_tag="SPAC6G9.10c"
                     /codon_start=1
                     /product="helicase Sen1"
                     /protein_id="NP_594119.1"
                     /db_xref="EnsemblGenomes-Gn:SPAC6G9.10c"
                     /db_xref="EnsemblGenomes-Tr:SPAC6G9.10c.1"
                     /db_xref="GeneID:2541556"
                     /db_xref="GOA:Q92355"
                     /db_xref="InterPro:IPR024481"
                     /db_xref="InterPro:IPR026852"
                     /db_xref="InterPro:IPR027417"
                     /db_xref="PomBase:SPAC6G9.10c"
                     /db_xref="PomBase:SPAC6G9.10c.1"
                     /translation="MAENLSDQDCFEKLSSSKEGQHWFCSGLLTQYIQPTFFWFAHDE
                     TPSFKWVLNAYHERLRSCTSCIQAYYELRNESLAKGSYSFTGFSITDLQEKWNKWDII
                     RVLEDFKALEDETIDFTSLPCLIFETLLNPKLFTCKNIYKNAIDAFNGLLSDWCSNIF
                     LPGYLLFFYEASHPDVLEWVHSFFKENTEIRISSATVDAVFNTVVFESQNSSDSDCNF
                     VSISSPEFWERTYMFLELLPLQSITAACESILKDYLLNLVKTSESLSSQQMSCLRICC
                     NSSSFWSAADSFKEVSSFLKNLLKNVTATPFEVSDMNWAYIIASFFRTCLNDFVSVFP
                     EWLKGFVEEKRTIGFIIYSVLDALFDLLSLDYSSPSFLNNTLSLMNANSITILQDYPE
                     YMLKLRLHSLLYDIAFISWSHKAITKNPSFVFDPSYELSPFWKLDNLQEEKISDVLFS
                     KISSCCFAHDIEISENSTPSGTMVQFAELWQVMSEYISGFLKGFSEKSSTEISNMLGD
                     SSKFDTVVSFLLSPTQPLYVSAFHIVQIITNCTKNRNEALKKLVAMDFRGIVHGLADA
                     VLNWQSILSFFPALRIMRFLSITNKSLSSDNSAFTENDIPTLGAYWQCIWNILDLVFS
                     NVARWSLNNPADTVKALMKLTLKFVDDLFQNDGIFIKLLAKFDSLILLGETSESLFSF
                     IMWLKINDLELRGIVINSLCKLFTKFSNFDYLFEDRTVTFLTDFIIRKQKAHLSADQC
                     KQLANVLTQASPEAKTVLEQHRLSEMRKTKKQTELTNSAHVIKPSPTPQITVKQNTTK
                     SSSAPRMGMLEQLKQEYLTKRNFESKLKSSAVSSRKPTFNEVKPANLLAEDLSDNEDD
                     IDRKQGLFSLAKANKIPEIRQQERRQVQLLSNSTIKMHPSQIRMMTNRNVANVKARLF
                     PSMTDFYKEILSWEPANQSPNPVLKFHKLDGKIIDSFKTVEHYMEVLQPMIFMECWSQ
                     IQSTKLDLKFSPVEGIMVERTAVNNFVDIGVSVAPKDLYGYPLYDTEVVSLAFNKEDA
                     SSMKGLCCFAKVERIVRQTNGVLVVLRTLPSMEILNKLQGNCALWFLKLTNLATFTRQ
                     YAGIRGLPYFHLADDIIRARPCSQPVKHSSSEIKAAMKRYQVNEPQAKAIMCALDNNG
                     FTLIQGPPGTGKTKTIIGIISALLVDLSRYHITRPNQQSKSTESKQQILLCAPSNAAV
                     DEVLLRLKRGFLLENGEKYIPRVVRIGNPETINVSVRDLSLEYQTEKQLLEVNQGAID
                     LGSLQELTRWRDTFYDCIQKIEELEKQIDVARDVAEDTKSLGKELQNKINEKNLAEQK
                     VEELQSQSFTKNKEVDLLRKKAQKAILKQADVVCATLSGSGHDLVAHSSLNFSTVIID
                     EAAQAVELDTIIPLRYGAKKCILVGDPNQLPPTVLSKKAASLNYSQSLFVRIQKNFSN
                     QMCLLSIQYRMHPDISHFPSKKFYDSRLEDGDNMAEKTQQVWHVNPKFTQYRLFDVRG
                     KERTSNTMSTYNLEEVEYLVNMVDELLNKFPDVNFTGRIGVITPYRSQLHELRRAFKV
                     KYGKSFMSTIDIQTVDGFQGQEKDIIFFSCVKSYSKHGIGFLRDFRRLNVALTRARSS
                     LLIIGNMETLKTDDLWGSLVDDALSRKLVESPHIDSEGRLITISRTSEKRMKNEEFVE
                     PPSKKLANSEPSKEIRQRS"
ORIGIN      
        1 aacaaatcct tagtattggt gaatttggga ggaaccaact acgccctttg gaatagagat
       61 ttggaaacac gtcttgtttc ttggcgattt gagctgttca taacaatata tttcttcttc
      121 taaatttcct tgagttatga aatttttatg aaagttttaa ctttcacata gtgttaaaag
      181 gtctcctctc atcgctgtag cgtccgaaac gttatttgtt attttattct tgagatcttt
      241 tgtaaataaa attttattta cgttacgatt tacgtctgga ttagggtttt ggttttggca
      301 cttgcaatat tagatttttc ctgggttttt ggtctatcgg tgaaacaacg tttatttggg
      361 tccatttaat catacattta ttagaaaaaa gtctttaaaa aagagacaat actcacttac
      421 ctacatttct tttgtttgtt tttttgtttt cactctttta tcagaaaaac aggttgaaat
      481 ttccaaaaaa aatattattt acttcataac attaaaaaaa tattaaattt gattgttaca
      541 aatggcggag aatcttagcg atcaagattg ttttgaaaaa ttatcgtcta gtaaagaggg
      601 tcagcattgg ttttgctcag gactactgac tcagtatata caacctacct tcttttggtt
      661 tgcacatgat gaaactccga gctttaaatg ggtattaaat gcctatcatg agcgtttacg
      721 ctcttgtact tcttgtatac aagcttatta tgaacttcga aatgaatccc ttgcgaaagg
      781 ttcatattct tttactgggt tttcaattac cgatttacag gaaaagtgga ataaatggga
      841 tattatccgt gtcttagagg acttcaaggc cctggaggat gaaacaattg acttcacgtc
      901 tttgccttgc ttaattttcg aaaccctctt gaatcctaaa ttgtttacct gtaaaaatat
      961 ttataaaaat gcaatagatg catttaatgg tctactttca gattggtgtt ctaatatatt
     1021 tcttcctggt tatttactat ttttctatga agcttcccat cccgatgttt tggaatgggt
     1081 tcatagcttt tttaaggaaa atactgaaat aagaatttct tctgctacag ttgacgccgt
     1141 ttttaatact gtagtgtttg aaagtcaaaa ttcctctgac agtgattgta atttcgtgtc
     1201 tataagtagt cctgaatttt gggaacgtac ttacatgttt ttagaacttc ttcctttaca
     1261 atccattact gctgcatgtg agtccatttt aaaagattat cttttaaatt tggtaaagac
     1321 ttctgaatct ctatcctctc aacaaatgtc ctgtcttcga atttgctgca attcctcatc
     1381 cttttggtct gccgctgatt catttaagga agtgtcttct ttcttaaaaa acttgctaaa
     1441 aaatgttaca gctacacctt ttgaagtatc tgacatgaac tgggcttaca ttattgcttc
     1501 attttttcgc acatgtttaa atgactttgt tagtgttttt ccggaatggc ttaaaggatt
     1561 tgtagaagag aagcgtacta taggtttcat catttattcg gttttggatg cgttatttga
     1621 tctattatcg ctagattaca gctctccttc atttcttaac aatacactat cgttgatgaa
     1681 tgctaatagc atcactattt tacaagatta tccggagtac atgctgaaac tcagattgca
     1741 ctctttactt tatgacattg catttataag ttggtctcat aaggcaatca ctaaaaatcc
     1801 ctcatttgtt ttcgatcctt catatgaact ctctcctttt tggaagcttg acaatctaca
     1861 ggaagaaaaa atatctgacg tccttttctc taaaatttca agttgttgct ttgcccacga
     1921 tattgaaata tccgaaaatt ctacaccgtc tggaaccatg gtgcagtttg ctgaactatg
     1981 gcaagtaatg tcggaatata tcagtggatt tttaaaagga ttttctgaaa agtcgtctac
     2041 tgaaatttca aatatgctgg gagattcttc aaaatttgac acagttgtat catttctgtt
     2101 atctcctact cagccgctct atgttagtgc ttttcatatt gtccaaataa ttaccaattg
     2161 cactaaaaac aggaatgagg ctcttaaaaa actggttgca atggattttc gaggaattgt
     2221 gcatggtcta gctgatgctg ttcttaactg gcaatctatt ttaagcttct ttcctgctct
     2281 tcgaattatg agatttttga gcattactaa taaatcctta tcatctgaca attctgcttt
     2341 cacagaaaat gacataccta ccttgggtgc ttattggcag tgcatctgga acatattgga
     2401 tttagttttt tccaacgttg ccagatggtc gcttaacaat cctgctgata cggttaaagc
     2461 attgatgaaa ctaacactta agtttgttga tgatcttttc caaaatgacg gaatcttcat
     2521 aaagctcctt gctaagtttg atagcttgat tctgttaggc gaaacttctg aatcattgtt
     2581 ctcttttatt atgtggctta aaataaacga tttagaatta aggggaattg tcatcaatag
     2641 tttatgcaag cttttcacta aattttcgaa ttttgactac cttttcgagg atcgcaccgt
     2701 taccttcctt acagatttta tcattagaaa gcaaaaagca catttgtctg ccgatcaatg
     2761 taaacagctt gctaatgttt tgactcaggc tagccctgaa gcaaagactg tacttgagca
     2821 acaccgactt tcggaaatgc gaaaaacaaa gaaacaaaca gaactaacta atagtgcaca
     2881 tgtcataaag ccaagtccta cacctcaaat tactgtgaaa cagaatacta ctaaatcttc
     2941 aagtgcccct cgcatgggaa tgctggagca actaaagcag gagtatttga ctaaacgaaa
     3001 ctttgaatct aaactcaaat catctgctgt atcttcaaga aagccaacat ttaatgaagt
     3061 caagccagct aaccttttag ctgaggacct ctcagataat gaggatgata ttgatagaaa
     3121 gcaaggatta ttctctcttg ccaaagcaaa caaaattcca gagatacgcc aacaagagcg
     3181 acgacaagtg cagctattat ctaattccac tattaagatg catccttcac aaattcggat
     3241 gatgactaat aggaacgttg caaatgttaa agcacgctta tttccaagta tgactgactt
     3301 ttacaaagaa attttgagct gggaaccagc taatcagtca cctaatcctg tactgaaatt
     3361 tcataagctt gatgggaaaa ttattgatag ttttaaaacg gttgaacatt atatggaggt
     3421 tttgcagccg atgatattta tggaatgctg gagtcaaatt cagtcaacaa aattggattt
     3481 aaaattctct cctgttgaag gaatcatggt tgaaagaacg gccgtcaata attttgttga
     3541 tataggagtc tcagtggctc ccaaggatct atacggttat cccttatatg atacggaagt
     3601 agtttcgttg gcttttaaca aggaggatgc ttcatcaatg aaagggctgt gttgctttgc
     3661 gaaagttgaa cgcatagtta ggcaaacgaa tggagtttta gttgtcttac gtacgttacc
     3721 atctatggaa attttgaaca aattacaagg taattgtgct ttatggtttc taaaattaac
     3781 aaatttggct acattcactc gccaatatgc cggcataaga ggtttaccat actttcatct
     3841 agcagacgat attattcgtg cgaggccttg ttctcaacca gttaagcatt cttcaagcga
     3901 gataaaagca gctatgaagc gatatcaggt taacgaacct caagctaagg ccattatgtg
     3961 cgctcttgat aataacggat ttactttgat tcaaggtcct cccggtactg gtaaaacaaa
     4021 aacaattatt gggattattt cggctttgct cgtggacctt agtcgatacc acataacacg
     4081 accgaatcaa caatcgaaga gcacagaatc aaagcaacaa attttacttt gtgcacctag
     4141 taatgcagcg gttgacgaag ttttattgcg tctaaaacgt ggtttccttt tagaaaatgg
     4201 tgaaaaatat ataccaagag ttgtccgtat aggtaatccg gaaaccatta atgtttcagt
     4261 tcgcgatttg tctttggaat atcaaactga aaaacaactt ttagaagtca accaaggtgc
     4321 tattgacctt gggtcgctcc aggaactaac tcgctggcgt gatacgtttt acgattgtat
     4381 tcaaaaaatc gaagagcttg aaaaacaaat cgacgttgcc cgtgatgttg ctgaagatac
     4441 taaatctttg ggaaaagaac tccaaaataa aataaatgaa aaaaatttgg cagaacagaa
     4501 ggttgaggaa cttcaaagcc agagtttcac taaaaacaaa gaagttgatc ttttgagaaa
     4561 gaaagctcag aaagcgatct taaagcaagc agatgttgta tgcgccacgc tttccggaag
     4621 tggtcacgat ttggtagcac atagttcttt gaacttttct accgtaataa tcgatgaggc
     4681 tgcacaagct gttgagcttg ataccatcat tccccttcgt tatggtgcaa agaaatgtat
     4741 attagtaggt gatccaaatc aattaccccc tactgtatta agtaagaagg cggccagtct
     4801 taattattcg caatcactat tcgtgcgtat tcaaaagaac ttttccaatc aaatgtgtct
     4861 attgagtatt caatatcgta tgcacccgga tattagccac ttcccgagta agaagttcta
     4921 cgattcacga ttagaagatg gtgataatat ggctgaaaaa acacaacagg tttggcatgt
     4981 taatcccaaa tttacacaat atcgtctttt tgacgttaga ggtaaagaga gaacgtctaa
     5041 tactatgtcc acgtataacc tggaagaagt cgagtatctc gtcaatatgg tcgatgaatt
     5101 actaaataaa tttcccgacg ttaatttcac cgggcgaata ggtgttatta ccccatatcg
     5161 atcccaactt catgaacttc gtcgagcatt taaagttaaa tacggaaaat cgtttatgtc
     5221 gactattgac attcagactg ttgatggttt tcagggtcag gaaaaagaca ttatcttctt
     5281 ttcatgtgtt aaaagttatt ctaaacatgg cattggtttc ttaagagact ttaggcgatt
     5341 gaatgttgca ttaacacgtg caagaagctc tttgttaatc ataggaaata tggaaacatt
     5401 gaaaacagat gacttgtggg gaagcttggt agatgatgca ctttctcgaa aactggttga
     5461 aagtcctcac attgattctg aaggtcgctt gataactatt tccaggacat ccgaaaaacg
     5521 tatgaagaat gaagaatttg ttgagccacc ttccaaaaag ctagcgaatt ccgagccttc
     5581 taaagaaatc agacaacgat cataaacttt ctcttttttt ctgttttatt attaaagaat
     5641 tgattagatt tttttttaaa ca
//