Dbfetch
LOCUS NM_001019484 3012 bp mRNA linear PLN 14-JUL-2022 DEFINITION Schizosaccharomyces pombe putative glycosylceramide biosynthesis protein (SPAC589.12), partial mRNA. ACCESSION NM_001019484 VERSION NM_001019484.2 DBLINK BioProject: PRJNA127 BioSample: SAMEA3138176 KEYWORDS RefSeq. SOURCE Schizosaccharomyces pombe (fission yeast) ORGANISM Schizosaccharomyces pombe Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces. REFERENCE 1 (bases 1 to 3012) AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 2 (bases 1 to 3012) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (13-JUL-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 3012) AUTHORS Wood,V. CONSRTM The Schizosaccharomyces pombe Genome Sequencing Consortium TITLE Direct Submission JOURNAL Submitted (29-JUN-2007) European Schizosaccharomyces genome sequencing project, Sanger Institute, The Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_003424). On Dec 10, 2012 this sequence version replaced NM_001019484.1. COMPLETENESS: incomplete on the 5' end. FEATURES Location/Qualifiers source 1..3012 /organism="Schizosaccharomyces pombe" /mol_type="mRNA" /strain="972h-" /db_xref="taxon:4896" /chromosome="I" gene <1..3012 /locus_tag="SPAC589.12" /db_xref="GeneID:2542152" CDS 1..2916 /locus_tag="SPAC589.12" /codon_start=1 /product="putative glycosylceramide biosynthesis protein" /protein_id="NP_594060.2" /db_xref="EnsemblGenomes-Gn:SPAC589.12" /db_xref="EnsemblGenomes-Tr:SPAC589.12.1" /db_xref="GeneID:2542152" /db_xref="GOA:Q9HDZ2" /db_xref="InterPro:IPR005135" /db_xref="InterPro:IPR019402" /db_xref="InterPro:IPR027317" /db_xref="PomBase:SPAC589.12" /db_xref="PomBase:SPAC589.12.1" /translation="MTEKTSSLVFSAQYVALVHTICSFAAFFIPLALALYTHYYQVVK NEFYGYPEEWFPSVSATIGDWYPERSVFQWLIALTATPRLLVLLLWFTLSGISRPSVI ITTALGVLRTALCGGWVYVTSTDDHDWHDIFMIGYLISNAPWFILVSKCSPVNSMASR IRNIGSALFVLTIFPLIYWYIQHKFKHIPGAYTVYAFFEWSLILWDILFDSALYWDFK PLVFNLHTSKTYSNPSSFATRKKEKGEHLSYAEAAAVGTQAKNIKKDSNVKCSKKQIL FSLLYFSSEVYLSFVFWSVLTSLGLLVWYFPLWHMGISGYEACILFELSPFLLGIPLL RKFASKVPVIFLFLNVIGIAAYKLEDPVHRLFVTAFSVCCECLAWTSLFSNISPENLA IERKISTFLFGLLASSIAKYSFFSNNPIWPILNETNGGKQIPALIVGIIACLIFAIFH VQQTTANAVEHFKLRKITALSAALSLGTVLFCLHTFLCDSTVLMTWSWDGYPIKGPQP YPHGAVSIVVSICAVLVAPYLYQSGAFMLIGFVLACFGSYFMYINHGWCSYLGGLIFT SYVLIYSFASIRISSFYSPAKVWGGAFLVYILYSLAHVWVVAYEFVPGGPILRERTSY ILIFIGWNLAALVPAYSGESKEPNKADSSVVDIKQSDSSYRRRSFKKSLLTGFCLALM ALKFAIQNMPPYDYTPYHPNEKLFTAGIWTIHFGLDNFMYASENRIRDAVRDMELDVF GLLESDTQRLIMGFRDLTQVLAHDLGMYADYGPGPDKHTWGAALLSKFPIVNSTHHLL PSPQGELAPAIHATLDVYGELIDVVVSHNGQYESQLDRRLQSTELARIMRESPRPLVF LGYVVSNVGQEPQTILTRDTGMLDIEPADYDRWCQYIFYRGVKRIGYARLHRSTITDT ELQTGKFLVTKDLGRNVRIDKEHVPESHRYPSLFEGTGVNGHYYDNNLVVHEPWYYD" ORIGIN 1 atgacagaaa aaacaagctc tttagtgttt tcagcccaat acgtggcttt ggtgcatacc 61 atatgctctt ttgcagcctt ttttattcct ctagcattag cattatacac acactattat 121 caggtggtga agaacgaatt ttatggatat cctgaagaat ggtttccttc ggtctctgct 181 actattggtg attggtatcc agaaaggtcg gtattccagt ggcttattgc tctaacagca 241 acacctcgtc ttcttgttct gttgctttgg tttacattaa gcggaatttc aagaccatca 301 gtaattatta ctacagcgtt gggtgtttta cgaactgctc tctgtggtgg atgggtttat 361 gtaacttcga ctgatgacca tgattggcat gatattttca tgattggata tttaatttct 421 aacgctcctt ggtttatttt ggtttcaaaa tgttcaccag ttaattccat ggcttcacgt 481 attagaaata ttggatcagc attgttcgtt ttgactatat ttcccttaat ttactggtat 541 attcagcaca agtttaaaca tattcctggt gcctatactg tttatgcatt ctttgaatgg 601 tcattgatat tgtgggacat actttttgat tctgcgttgt actgggattt taaaccactc 661 gtgtttaatc tgcatacatc aaaaacctac tctaatccat cttcttttgc tacacgcaag 721 aaggagaaag gagaacattt gtcttatgca gaggctgcag ctgttggcac gcaagcaaag 781 aatatcaaaa aagatagtaa cgtcaagtgt tccaaaaagc aaatcttgtt tagcttgcta 841 tacttttcat ctgaggtgta tctttctttt gtcttctgga gcgttcttac tagcttaggg 901 ttattagtat ggtattttcc cttatggcat atggggattt cgggctatga agcgtgcatt 961 cttttcgaac tttctccatt cttacttggt attccactat tgcgaaaatt tgcctcaaaa 1021 gtacctgtta tatttttatt tttaaatgtt ataggtatag ctgcctataa gcttgaggac 1081 ccggtgcaca gattatttgt tactgcgttt tctgtctgtt gtgaatgtct cgcctggact 1141 tctttatttt caaatatttc gcctgaaaat ttagcaatag aacgtaaaat tagcacattt 1201 ttgtttggat tgcttgcgtc ttcaatcgcc aagtactctt ttttttctaa caatcctata 1261 tggcctattt taaatgaaac aaacggtgga aaacaaatcc cagcgttaat tgtcggaata 1321 attgcatgtc taatatttgc cattttccat gtgcagcaaa caacagcgaa tgccgtggaa 1381 cattttaaac taaggaagat aactgctctg tctgcagccc taagcttggg cacagtactt 1441 ttttgtctgc atacttttct ttgtgactct acagttctta tgacatggtc gtgggatggg 1501 tatcctatta agggaccgca accttatcca cacggtgccg tttcaatagt tgtttccatt 1561 tgcgctgttt tggtagcccc ttatttatat caatcaggtg cttttatgct tattggattt 1621 gttttagcct gcttcggatc atattttatg tatattaacc atggatggtg tagttatttg 1681 ggtgggttaa tatttacttc ctacgtttta atttactcgt tcgcttctat cagaatttcc 1741 tccttctatt ctcctgcgaa ggtttggggt ggcgcttttt tggtttacat cctttactca 1801 ttagctcatg tttgggtcgt agcctacgag tttgttccag gtggacccat tcttcgagag 1861 agaacttctt acattctaat tttcattggt tggaaccttg cagctttagt acctgcgtat 1921 tcgggtgagt ccaaagaacc caacaaagca gactcatctg tagtagatat caaacaatca 1981 gattcttctt atcgtagaag aagtttcaaa aaatcactat tgacaggttt ttgtctggct 2041 cttatggccc taaaatttgc cattcagaat atgcctccgt atgactatac accttaccat 2101 ccaaatgaaa agcttttcac tgctggtatt tggactattc actttggctt agacaatttc 2161 atgtatgcaa gtgagaatcg tatacgcgat gctgttcgag atatggaact tgatgtcttt 2221 ggtctactgg aatctgacac acaacgttta attatgggat ttcgagattt aacccaggtt 2281 ttagcacatg atctaggaat gtatgcggat tatggcccag gccctgataa acatacttgg 2341 ggcgctgcgt tactctccaa atttcctatt gtcaactcga ctcaccattt gttaccttct 2401 cctcaaggag aacttgctcc tgctattcat gcaacactag atgtctacgg agagctaata 2461 gatgttgtgg tttctcacaa tggtcaatat gaaagtcagt tggatcgacg tcttcagagc 2521 actgagttgg ctcgaattat gcgcgagagt ccaaggcctc tagtgtttct cggatatgtt 2581 gtttcaaacg ttggccaaga accccaaact attctaacgc gagacacggg aatgttagac 2641 attgaacctg ctgactatga tcgttggtgt cagtatatat tttatcgagg tgtcaagcga 2701 attggttatg ctagacttca tcgctctact ataacagaca ccgagcttca aaccggaaag 2761 tttttggtta ccaaagattt aggtaggaac gtcagaatcg acaaggaaca cgttcctgaa 2821 tcacacaggt atccatcatt atttgaagga acgggtgtta atggacatta ctatgacaat 2881 aatttagttg ttcacgagcc gtggtactat gattaaaatc acaaatttga ttcatttaaa 2941 tttccatggt tttgaaaaga aaaagactga tataattaga atcaatataa gcattatacg 3001 aatttgataa ac //