Dbfetch
LOCUS NM_001019479 1364 bp mRNA linear PLN 14-JUL-2022 DEFINITION Schizosaccharomyces pombe WD repeat-containing protein Atg18 (atg18), partial mRNA. ACCESSION NM_001019479 VERSION NM_001019479.2 DBLINK BioProject: PRJNA127 BioSample: SAMEA3138176 KEYWORDS RefSeq. SOURCE Schizosaccharomyces pombe (fission yeast) ORGANISM Schizosaccharomyces pombe Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces. REFERENCE 1 (bases 1 to 1364) AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R., Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D., Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T., Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P., Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D., Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S., Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M., Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S., Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S., Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S., Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M., Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G., Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J., Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I., Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D., Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H., Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H., Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S., Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z., Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C., Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L., Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A., Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L., Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V., Ussery,D., Barrell,B.G. and Nurse,P. TITLE The genome sequence of Schizosaccharomyces pombe JOURNAL Nature 415 (6874), 871-880 (2002) PUBMED 11859360 REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to Cerutti L]] REFERENCE 2 (bases 1 to 1364) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (13-JUL-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 1364) AUTHORS Wood,V. CONSRTM The Schizosaccharomyces pombe Genome Sequencing Consortium TITLE Direct Submission JOURNAL Submitted (29-JUN-2007) European Schizosaccharomyces genome sequencing project, Sanger Institute, The Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_003424). On Dec 10, 2012 this sequence version replaced NM_001019479.1. COMPLETENESS: incomplete on the 5' end. FEATURES Location/Qualifiers source 1..1364 /organism="Schizosaccharomyces pombe" /mol_type="mRNA" /strain="972h-" /db_xref="taxon:4896" /chromosome="I" gene <1..1364 /gene="atg18" /locus_tag="SPAC589.07c" /gene_synonym="atg18a" /db_xref="GeneID:2542180" CDS 1..1122 /gene="atg18" /locus_tag="SPAC589.07c" /gene_synonym="atg18a" /codon_start=1 /product="WD repeat-containing protein Atg18" /protein_id="NP_594055.1" /db_xref="EnsemblGenomes-Gn:SPAC589.07c" /db_xref="EnsemblGenomes-Tr:SPAC589.07c.1" /db_xref="GeneID:2542180" /db_xref="GOA:Q9HDZ7" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR017986" /db_xref="PomBase:SPAC589.07c" /db_xref="PomBase:SPAC589.07c.1" /translation="MHFFVRKYRGKAALLSIGTFDGYKIYNCDPFGKCFHKIQGATSI VEMLFSTSLVALVEKDDGNNRKLKLINTKKSTTICELTFPTPLLAVKLNRKRLLAVLE EQIYVYDISNMLLLHTIETTSNVFAVCALSPNSENCYLAYPDSRDHEPRTEGESSSPN VSNSAVSGQVILWDVINCKQITKIEAHKDSLACLAFNSDGTMLATASDNGRIIRVFAI PSGQRLYQFRRGSLPAQIYSIAFHPDSSLLTVTSSTQTVHIFRLKEVYSNLERQGLLP SSPPPKESLLRRSSRSLIGTVGGYLPQSVSGMLDPERDFAYAHIPGDKVTSIAAFGPD NTIVNVATYDGNLYSFRVNLRTGGECAMVNHFCVGLTAA" ORIGIN 1 atgcatttct ttgttcggaa gtaccgcggc aaagcagctt tgctctccat tggaacattc 61 gatggatata agatatacaa ttgtgatccg tttggaaaat gttttcacaa aattcaaggt 121 gctacttcaa tagtagagat gctgttcagt acatctctgg tggctcttgt ggagaaggac 181 gatggaaata atagaaagct gaagttaatt aacacaaaga aaagcactac aatatgtgag 241 ttgacatttc cgactccttt actagctgtc aagctgaatc gaaaacgctt gctggcggtt 301 ttggaggaac aaatttatgt atatgatata agcaatatgc ttttgcttca cacaatcgaa 361 acaactagta atgtgttcgc tgtttgtgct ctttcaccga attccgaaaa ttgctatttg 421 gcgtatcctg atagtcggga tcatgagcct aggacggaag gtgagtcctc cagtcctaat 481 gtatctaatt ctgctgtttc tggtcaagtc attttgtggg atgtaatcaa ttgtaagcaa 541 ataaccaaaa ttgaagccca taaagattca cttgcctgtt tggcatttaa ctctgacggc 601 acaatgcttg caactgcttc tgataatggt cgaattattc gagttttcgc tataccttca 661 ggccagcgat tatatcagtt tcgtcgtggt tctctccctg cccagattta ttctattgct 721 tttcatcccg attctagtct tttgacggta acatctagta cacaaaccgt tcacattttc 781 cgtctcaagg aggtatattc taatttagag cgtcaaggtc ttcttccttc ttctccccct 841 cccaaagaaa gcttacttcg tcgttcctca agatcactca taggtactgt tggtggatac 901 cttccgcagt cggtttctgg aatgctcgac ccagaaagag attttgcata cgctcatata 961 cctggtgata aggtcacctc aatcgctgct ttcggtccag ataatactat tgtaaatgtt 1021 gcaacttatg acggaaacct ttattctttt cgtgttaatt tgcgaacagg aggagaatgc 1081 gctatggtaa atcatttttg tgtaggtctt actgctgcat gaaaaacaat tttttataac 1141 gaatcttccc tttaaaaagt tttgtctgtc aaaagctcca ccgttgtttt gtatgttact 1201 ctgcatttac gtttcctatc aacttttcat tattcaatca tcattaccat ttggtttata 1261 taccaactat tcgtttttaa actgaacagg tccattaacc tggtatttta tcctctttta 1321 ggattattaa gttgaatcct ttttcgtata attctgacat gcca //