Dbfetch

LOCUS       NM_001019189            2290 bp    mRNA    linear   PLN 14-JUL-2022
DEFINITION  Schizosaccharomyces pombe putative aminotransferase class I and II
            (SPAC6B12.04c), mRNA.
ACCESSION   NM_001019189
VERSION     NM_001019189.2
DBLINK      BioProject: PRJNA127
            BioSample: SAMEA3138176
KEYWORDS    RefSeq.
SOURCE      Schizosaccharomyces pombe (fission yeast)
  ORGANISM  Schizosaccharomyces pombe
            Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
            Schizosaccharomycetes; Schizosaccharomycetales;
            Schizosaccharomycetaceae; Schizosaccharomyces.
REFERENCE   1  (bases 1 to 2290)
  AUTHORS   Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R.,
            Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D.,
            Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T.,
            Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P.,
            Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D.,
            Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S.,
            Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M.,
            Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S.,
            Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S.,
            Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S.,
            Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M.,
            Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G.,
            Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J.,
            Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I.,
            Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C.,
            Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D.,
            Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H.,
            Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H.,
            Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S.,
            Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z.,
            Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C.,
            Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L.,
            Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A.,
            Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L.,
            Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V.,
            Ussery,D., Barrell,B.G. and Nurse,P.
  TITLE     The genome sequence of Schizosaccharomyces pombe
  JOURNAL   Nature 415 (6874), 871-880 (2002)
   PUBMED   11859360
  REMARK    Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to
            Cerutti L]]
REFERENCE   2  (bases 1 to 2290)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-JUL-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 2290)
  AUTHORS   Wood,V.
  CONSRTM   The Schizosaccharomyces pombe Genome Sequencing Consortium
  TITLE     Direct Submission
  JOURNAL   Submitted (29-JUN-2007) European Schizosaccharomyces genome
            sequencing project, Sanger Institute, The Wellcome Trust Genome
            Campus, Hinxton, Cambridge CB10 1SA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_003424).
            
            On Dec 10, 2012 this sequence version replaced NM_001019189.1.
FEATURES             Location/Qualifiers
     source          1..2290
                     /organism="Schizosaccharomyces pombe"
                     /mol_type="mRNA"
                     /strain="972h-"
                     /db_xref="taxon:4896"
                     /chromosome="I"
     gene            1..2290
                     /locus_tag="SPAC6B12.04c"
                     /db_xref="GeneID:2543228"
     CDS             195..1460
                     /locus_tag="SPAC6B12.04c"
                     /EC_number="2.6.1.-"
                     /codon_start=1
                     /product="putative aminotransferase class I and II"
                     /protein_id="NP_593759.1"
                     /db_xref="EnsemblGenomes-Gn:SPAC6B12.04c"
                     /db_xref="EnsemblGenomes-Tr:SPAC6B12.04c.1"
                     /db_xref="GeneID:2543228"
                     /db_xref="GOA:O14209"
                     /db_xref="InterPro:IPR004839"
                     /db_xref="InterPro:IPR015421"
                     /db_xref="InterPro:IPR015422"
                     /db_xref="InterPro:IPR015424"
                     /db_xref="PomBase:SPAC6B12.04c"
                     /db_xref="PomBase:SPAC6B12.04c.1"
                     /translation="MAFRGIRPSNKVAASRPDVWTLVNQATAECKVPPVSLSQGFFNY
                     NPPKFVLDAAKKSIDEVACNQYSHTRGRPSLRKALSEAYSPYFKRTLNPDTEIVVTAG
                     ANEGFFSVFAAFLNPGDEVIVMEPFFDQYISNITMNGGVPVYVPIIPPEEGSVKPVSA
                     GAWKLDMNKLRNAITEKTKMIVINTPHNPLGKIFSEEELNEIADLVLKHNLLVVSDEV
                     YDRLSFVPFVRLATLRPELFKHVVTVGSGGKTFGCTGWRVGWLIGDESLIKYSAAAHT
                     RICFAVNSPCQEALAIAFGEAEKHNYYEEYKSSYKKRFEILAKAFDQLEIPYTIPDGS
                     YYTMANFSKLKLPKDYPFPEEIANRPRDFKLCYWILKEIGVATIPPTEFYTDEDAPVA
                     ENYLRFAFCKTFETLEEAARRLQKLKDYF"
ORIGIN      
        1 aatattacgt gcttattgct caccatctac tttgtaatcg ctgcttaaga ggatccgcgt
       61 ctaaatattt aagataacct accaaactat acaaatcact tttgtacaat caccccggtg
      121 tattagatct gccatattag gcagtgattt ttttaatttt tttcaaactg ttcagaaata
      181 gcaagttttt aggaatggcc ttcagaggta tacggccttc taacaaagtc gctgcaagcc
      241 gtcctgatgt atggacccta gtgaatcaag caacagctga atgtaaagtt cctcctgtat
      301 cacttagtca aggatttttc aattataatc caccaaagtt tgttttggat gctgccaaga
      361 agtctatcga cgaggttgct tgcaatcaat actcacacac tcgcggaagg ccaagcttac
      421 gaaaagcgtt atcagaagcg tattctccct atttcaaacg tactttaaat ccagacactg
      481 aaattgtagt aacggcaggt gcaaatgaag ggttctttag tgtttttgcg gcctttttaa
      541 acccaggaga cgaagttata gttatggagc cattttttga tcaatatata tctaatatta
      601 ccatgaacgg tggagttcct gtctatgtac ctattatacc tcctgaggaa ggatcggtga
      661 aaccggtatc tgcaggtgct tggaagctgg atatgaacaa gttaagaaat gctattacag
      721 aaaagacgaa aatgatagta attaatacac ctcacaatcc tctaggcaag atcttttcgg
      781 aagaagaatt gaatgaaatt gccgatttgg tattaaagca caatctatta gtcgtgtctg
      841 atgaagtcta tgaccgtctt tcctttgttc cgttcgtcag gcttgctact cttcgtcctg
      901 aacttttcaa acatgttgta acagttggat ctggcggaaa aacgtttgga tgtacgggat
      961 ggcgtgttgg ttggcttatt ggtgatgaaa gcctaatcaa atattctgcc gcagctcata
     1021 ctcgtatttg ttttgctgtc aatagccctt gtcaagaggc cttggccata gcctttggcg
     1081 aagcagagaa acataattac tatgaagagt ataaatcttc gtacaaaaag cgttttgaga
     1141 ttctagccaa ggcgtttgat caattagaga ttccctacac tataccagat ggcagttatt
     1201 atacgatggc gaacttctcc aaactcaaat tacctaagga ctatccattt ccagaggaaa
     1261 tagccaatcg acctagggat ttcaagcttt gttattggat tttgaaggaa attggtgttg
     1321 ctacgatccc ccctaccgaa ttctatacgg atgaagatgc accagttgca gagaattacc
     1381 ttcgctttgc attttgcaaa acttttgaaa ctttagaaga agcagctaga agattacaga
     1441 agttgaaaga ctatttttag atagtattgc tatagattac atgtatatct aaaatttata
     1501 cttatttgcg ttacaatgaa aaccatcaaa aacgtattat agtaaaaggc aatttataag
     1561 tgatgtctag ctttattttt ctgttttttt aatggttatg cagttcgaca cgatctgtcc
     1621 ttattaatta atcgcttata aaattatggg tttttcctct gggacatcat tctttccttc
     1681 agtttgcatt ttcttagtaa actcttcatt gcaatgatct tgcattgctc ggacttgttc
     1741 ttttaaggaa atataataat catcaacttc aactggttca aacccaacgg gaagactttt
     1801 taaaaatgga cgtgtagtat ctgtttcgca tttatacgtt agttcaagat tgttcattgc
     1861 tttaactttt atttgtatat aaaaaaaaaa aaagaaaaaa aagagaagaa attaattaaa
     1921 acagaaaaac aggatttccg caacaatatt aattgaaaaa aaagatagat attatgcaaa
     1981 agcttcggat ggaataaact atcgtttttt atccgcacag tttttgtaaa ggatagatat
     2041 gatatgttgt caatatatag tactttaaac aacgttcttt aaaatttact cacgttatta
     2101 tcggctttgc gttgctagtt agaggtactt cttaaagcac tactatctta taccaaagtc
     2161 tcctagtcta ctagcaaata ctattgggct ttgatagcac aggtatgcaa taatcttttg
     2221 ttaaatcatc aaggcttagt aaacttattg agcaccaaat atgaataatt aaaaatgcat
     2281 taaacgcttt
//