Dbfetch
LOCUS NM_001019189 2290 bp mRNA linear PLN 14-JUL-2022
DEFINITION Schizosaccharomyces pombe putative aminotransferase class I and II
(SPAC6B12.04c), mRNA.
ACCESSION NM_001019189
VERSION NM_001019189.2
DBLINK BioProject: PRJNA127
BioSample: SAMEA3138176
KEYWORDS RefSeq.
SOURCE Schizosaccharomyces pombe (fission yeast)
ORGANISM Schizosaccharomyces pombe
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
Schizosaccharomycetes; Schizosaccharomycetales;
Schizosaccharomycetaceae; Schizosaccharomyces.
REFERENCE 1 (bases 1 to 2290)
AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R.,
Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D.,
Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T.,
Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P.,
Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D.,
Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S.,
Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M.,
Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S.,
Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S.,
Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S.,
Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M.,
Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G.,
Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J.,
Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I.,
Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C.,
Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D.,
Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H.,
Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H.,
Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S.,
Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z.,
Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C.,
Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L.,
Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A.,
Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L.,
Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V.,
Ussery,D., Barrell,B.G. and Nurse,P.
TITLE The genome sequence of Schizosaccharomyces pombe
JOURNAL Nature 415 (6874), 871-880 (2002)
PUBMED 11859360
REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to
Cerutti L]]
REFERENCE 2 (bases 1 to 2290)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (13-JUL-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 2290)
AUTHORS Wood,V.
CONSRTM The Schizosaccharomyces pombe Genome Sequencing Consortium
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2007) European Schizosaccharomyces genome
sequencing project, Sanger Institute, The Wellcome Trust Genome
Campus, Hinxton, Cambridge CB10 1SA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. This record is derived from an annotated genomic
sequence (NC_003424).
On Dec 10, 2012 this sequence version replaced NM_001019189.1.
FEATURES Location/Qualifiers
source 1..2290
/organism="Schizosaccharomyces pombe"
/mol_type="mRNA"
/strain="972h-"
/db_xref="taxon:4896"
/chromosome="I"
gene 1..2290
/locus_tag="SPAC6B12.04c"
/db_xref="GeneID:2543228"
CDS 195..1460
/locus_tag="SPAC6B12.04c"
/EC_number="2.6.1.-"
/codon_start=1
/product="putative aminotransferase class I and II"
/protein_id="NP_593759.1"
/db_xref="EnsemblGenomes-Gn:SPAC6B12.04c"
/db_xref="EnsemblGenomes-Tr:SPAC6B12.04c.1"
/db_xref="GeneID:2543228"
/db_xref="GOA:O14209"
/db_xref="InterPro:IPR004839"
/db_xref="InterPro:IPR015421"
/db_xref="InterPro:IPR015422"
/db_xref="InterPro:IPR015424"
/db_xref="PomBase:SPAC6B12.04c"
/db_xref="PomBase:SPAC6B12.04c.1"
/translation="MAFRGIRPSNKVAASRPDVWTLVNQATAECKVPPVSLSQGFFNY
NPPKFVLDAAKKSIDEVACNQYSHTRGRPSLRKALSEAYSPYFKRTLNPDTEIVVTAG
ANEGFFSVFAAFLNPGDEVIVMEPFFDQYISNITMNGGVPVYVPIIPPEEGSVKPVSA
GAWKLDMNKLRNAITEKTKMIVINTPHNPLGKIFSEEELNEIADLVLKHNLLVVSDEV
YDRLSFVPFVRLATLRPELFKHVVTVGSGGKTFGCTGWRVGWLIGDESLIKYSAAAHT
RICFAVNSPCQEALAIAFGEAEKHNYYEEYKSSYKKRFEILAKAFDQLEIPYTIPDGS
YYTMANFSKLKLPKDYPFPEEIANRPRDFKLCYWILKEIGVATIPPTEFYTDEDAPVA
ENYLRFAFCKTFETLEEAARRLQKLKDYF"
ORIGIN
1 aatattacgt gcttattgct caccatctac tttgtaatcg ctgcttaaga ggatccgcgt
61 ctaaatattt aagataacct accaaactat acaaatcact tttgtacaat caccccggtg
121 tattagatct gccatattag gcagtgattt ttttaatttt tttcaaactg ttcagaaata
181 gcaagttttt aggaatggcc ttcagaggta tacggccttc taacaaagtc gctgcaagcc
241 gtcctgatgt atggacccta gtgaatcaag caacagctga atgtaaagtt cctcctgtat
301 cacttagtca aggatttttc aattataatc caccaaagtt tgttttggat gctgccaaga
361 agtctatcga cgaggttgct tgcaatcaat actcacacac tcgcggaagg ccaagcttac
421 gaaaagcgtt atcagaagcg tattctccct atttcaaacg tactttaaat ccagacactg
481 aaattgtagt aacggcaggt gcaaatgaag ggttctttag tgtttttgcg gcctttttaa
541 acccaggaga cgaagttata gttatggagc cattttttga tcaatatata tctaatatta
601 ccatgaacgg tggagttcct gtctatgtac ctattatacc tcctgaggaa ggatcggtga
661 aaccggtatc tgcaggtgct tggaagctgg atatgaacaa gttaagaaat gctattacag
721 aaaagacgaa aatgatagta attaatacac ctcacaatcc tctaggcaag atcttttcgg
781 aagaagaatt gaatgaaatt gccgatttgg tattaaagca caatctatta gtcgtgtctg
841 atgaagtcta tgaccgtctt tcctttgttc cgttcgtcag gcttgctact cttcgtcctg
901 aacttttcaa acatgttgta acagttggat ctggcggaaa aacgtttgga tgtacgggat
961 ggcgtgttgg ttggcttatt ggtgatgaaa gcctaatcaa atattctgcc gcagctcata
1021 ctcgtatttg ttttgctgtc aatagccctt gtcaagaggc cttggccata gcctttggcg
1081 aagcagagaa acataattac tatgaagagt ataaatcttc gtacaaaaag cgttttgaga
1141 ttctagccaa ggcgtttgat caattagaga ttccctacac tataccagat ggcagttatt
1201 atacgatggc gaacttctcc aaactcaaat tacctaagga ctatccattt ccagaggaaa
1261 tagccaatcg acctagggat ttcaagcttt gttattggat tttgaaggaa attggtgttg
1321 ctacgatccc ccctaccgaa ttctatacgg atgaagatgc accagttgca gagaattacc
1381 ttcgctttgc attttgcaaa acttttgaaa ctttagaaga agcagctaga agattacaga
1441 agttgaaaga ctatttttag atagtattgc tatagattac atgtatatct aaaatttata
1501 cttatttgcg ttacaatgaa aaccatcaaa aacgtattat agtaaaaggc aatttataag
1561 tgatgtctag ctttattttt ctgttttttt aatggttatg cagttcgaca cgatctgtcc
1621 ttattaatta atcgcttata aaattatggg tttttcctct gggacatcat tctttccttc
1681 agtttgcatt ttcttagtaa actcttcatt gcaatgatct tgcattgctc ggacttgttc
1741 ttttaaggaa atataataat catcaacttc aactggttca aacccaacgg gaagactttt
1801 taaaaatgga cgtgtagtat ctgtttcgca tttatacgtt agttcaagat tgttcattgc
1861 tttaactttt atttgtatat aaaaaaaaaa aaagaaaaaa aagagaagaa attaattaaa
1921 acagaaaaac aggatttccg caacaatatt aattgaaaaa aaagatagat attatgcaaa
1981 agcttcggat ggaataaact atcgtttttt atccgcacag tttttgtaaa ggatagatat
2041 gatatgttgt caatatatag tactttaaac aacgttcttt aaaatttact cacgttatta
2101 tcggctttgc gttgctagtt agaggtactt cttaaagcac tactatctta taccaaagtc
2161 tcctagtcta ctagcaaata ctattgggct ttgatagcac aggtatgcaa taatcttttg
2221 ttaaatcatc aaggcttagt aaacttattg agcaccaaat atgaataatt aaaaatgcat
2281 taaacgcttt
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