Dbfetch
LOCUS NM_001019001 1567 bp mRNA linear PLN 14-JUL-2022
DEFINITION Schizosaccharomyces pombe Swr1 complex subunit Swc4 (swc4), mRNA.
ACCESSION NM_001019001
VERSION NM_001019001.3
DBLINK BioProject: PRJNA127
BioSample: SAMEA3138176
KEYWORDS RefSeq.
SOURCE Schizosaccharomyces pombe (fission yeast)
ORGANISM Schizosaccharomyces pombe
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
Schizosaccharomycetes; Schizosaccharomycetales;
Schizosaccharomycetaceae; Schizosaccharomyces.
REFERENCE 1 (bases 1 to 1567)
AUTHORS Wood,V., Gwilliam,R., Rajandream,M.A., Lyne,M., Lyne,R.,
Stewart,A., Sgouros,J., Peat,N., Hayles,J., Baker,S., Basham,D.,
Bowman,S., Brooks,K., Brown,D., Brown,S., Chillingworth,T.,
Churcher,C., Collins,M., Connor,R., Cronin,A., Davis,P.,
Feltwell,T., Fraser,A., Gentles,S., Goble,A., Hamlin,N., Harris,D.,
Hidalgo,J., Hodgson,G., Holroyd,S., Hornsby,T., Howarth,S.,
Huckle,E.J., Hunt,S., Jagels,K., James,K., Jones,L., Jones,M.,
Leather,S., McDonald,S., McLean,J., Mooney,P., Moule,S.,
Mungall,K., Murphy,L., Niblett,D., Odell,C., Oliver,K., O'Neil,S.,
Pearson,D., Quail,M.A., Rabbinowitsch,E., Rutherford,K., Rutter,S.,
Saunders,D., Seeger,K., Sharp,S., Skelton,J., Simmonds,M.,
Squares,R., Squares,S., Stevens,K., Taylor,K., Taylor,R.G.,
Tivey,A., Walsh,S., Warren,T., Whitehead,S., Woodward,J.,
Volckaert,G., Aert,R., Robben,J., Grymonprez,B., Weltjens,I.,
Vanstreels,E., Rieger,M., Schafer,M., Muller-Auer,S., Gabel,C.,
Fuchs,M., Dusterhoft,A., Fritzc,C., Holzer,E., Moestl,D.,
Hilbert,H., Borzym,K., Langer,I., Beck,A., Lehrach,H.,
Reinhardt,R., Pohl,T.M., Eger,P., Zimmermann,W., Wedler,H.,
Wambutt,R., Purnelle,B., Goffeau,A., Cadieu,E., Dreano,S.,
Gloux,S., Lelaure,V., Mottier,S., Galibert,F., Aves,S.J., Xiang,Z.,
Hunt,C., Moore,K., Hurst,S.M., Lucas,M., Rochet,M., Gaillardin,C.,
Tallada,V.A., Garzon,A., Thode,G., Daga,R.R., Cruzado,L.,
Jimenez,J., Sanchez,M., del Rey,F., Benito,J., Dominguez,A.,
Revuelta,J.L., Moreno,S., Armstrong,J., Forsburg,S.L., Cerutti,L.,
Lowe,T., McCombie,W.R., Paulsen,I., Potashkin,J., Shpakovski,G.V.,
Ussery,D., Barrell,B.G. and Nurse,P.
TITLE The genome sequence of Schizosaccharomyces pombe
JOURNAL Nature 415 (6874), 871-880 (2002)
PUBMED 11859360
REMARK Erratum:[Nature 2003 Jan 2;421(6918):94. Cerrutti L [corrected to
Cerutti L]]
REFERENCE 2 (bases 1 to 1567)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (13-JUL-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1567)
AUTHORS Wood,V.
CONSRTM The Schizosaccharomyces pombe Genome Sequencing Consortium
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2007) European Schizosaccharomyces genome
sequencing project, Sanger Institute, The Wellcome Trust Genome
Campus, Hinxton, Cambridge CB10 1SA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. This record is derived from an annotated genomic
sequence (NC_003424).
On Dec 10, 2012 this sequence version replaced NM_001019001.2.
FEATURES Location/Qualifiers
source 1..1567
/organism="Schizosaccharomyces pombe"
/mol_type="mRNA"
/strain="972h-"
/db_xref="taxon:4896"
/chromosome="I"
gene 1..1567
/gene="swc4"
/locus_tag="SPAC9G1.13c"
/db_xref="GeneID:2542412"
CDS 176..1489
/gene="swc4"
/locus_tag="SPAC9G1.13c"
/codon_start=1
/product="Swr1 complex subunit Swc4"
/protein_id="NP_593568.2"
/db_xref="EnsemblGenomes-Gn:SPAC9G1.13c"
/db_xref="EnsemblGenomes-Tr:SPAC9G1.13c.1"
/db_xref="GeneID:2542412"
/db_xref="GOA:O14308"
/db_xref="InterPro:IPR001005"
/db_xref="InterPro:IPR027109"
/db_xref="PomBase:SPAC9G1.13c"
/db_xref="PomBase:SPAC9G1.13c.1"
/translation="MTSADIRDVFELPPPEIGNKQKSKTPTERRPEGISRELYSLLGE
NSAPLAIYQKKFKEKPKVSHKAKNWVRQPFSISSRKDDFTLHHWVLKSEVDSEASYKF
EKFNVPLFIIDYTDEEYQNYLKDEDWNKDETDYLFRLCKDYDLRFFVIADRYDNEKYK
KHRTLEDLKDRFYSVSRKILLARNPINSMTAAQSSLLNTMEYNKEQEVIRKKYLIGLA
SRTPEEVAEEEALFIELKRIETSQAKLLSDRDEVLRLLDEQKGDGGIHEYHTSAGMSS
LIQDMINSQRTKNKVEEAIVSSSAPSSGVSSVLNTPTRPHALSTPRIRYGPQPTDPQF
GITWHEKLHPGTFVRSQKIPAIKASLSQRVSSVMTELGVSSRLIMPTAKNFEKFVELQ
NSIVSLLELKRKVDRLSQETEIQDKLSRKRSASPDGSESKKHISQ"
ORIGIN
1 ttcctgaatt acaaaattgc aagtgcactc taaaatctcc ttaaaaaata ggacaattga
61 gtacgcagtg ttatgctaaa taaatactgt agtctaacgt tttttaaaag aaaaccacat
121 ttgaagtgtc ggcgttttat tcgtacactg atgagaaaat tcagttcaaa atacaatgac
181 tagtgctgac attcgggatg tctttgaatt acctcctcct gaaataggaa ataagcagaa
241 atctaaaact ccaacagaga gaaggccaga aggaatttct cgagaacttt attcattgct
301 aggcgagaat tctgccccgt tagcaatata ccaaaagaaa tttaaggaaa aaccaaaagt
361 tagtcacaaa gctaaaaatt gggtacgcca gcccttttcc atatcaagcc gtaaggatga
421 ttttactttg catcattggg tccttaaatc agaagtagat tctgaagcct catacaaatt
481 tgaaaaattt aacgtccctc tgtttataat tgactacacc gacgaagagt accaaaatta
541 tttaaaagat gaggattgga ataaagatga aaccgactac ctattccgtt tatgcaaaga
601 ttatgacttg aggttctttg taatagcaga tcgttatgat aatgaaaaat ataaaaaaca
661 tcgaacgctt gaagatttaa aagacagatt ttattctgtg tcgcgaaaaa ttctattagc
721 caggaatccc attaattcaa tgactgctgc acagagctct ttgttgaata cgatggagta
781 caataaagag caagaagtta ttcggaagaa gtatctaatt gggcttgctt ctaggacgcc
841 tgaagaagtt gcagaagaag aagctttatt tattgaatta aaacgtattg aaacatcaca
901 ggctaaatta ttaagtgata gagacgaagt tctccgtcta ttagatgaac agaaaggaga
961 tggtggcatt catgaatatc acacaagtgc tggaatgagc agtttaattc aagatatgat
1021 taattctcaa agaaccaaaa ataaagtgga ggaagctatt gtatcttctt cagccccttc
1081 ttctggagtg tctagtgttt taaatacccc tactcgtcca catgctctca gcacaccaag
1141 aatcagatac ggtccgcaac cgacagatcc acaatttggc atcacttggc acgaaaaact
1201 acatccgggc acttttgttc gttcccaaaa aatccctgcc ataaaggctt ctttatcgca
1261 gagagtttcg tcagttatga ctgaactagg agtttcttca aggctgatta tgccgacagc
1321 taaaaacttt gagaagttcg ttgagctaca aaactcaatc gtttcgctac tggaactgaa
1381 aagaaaggta gatagactat ctcaggaaac tgaaattcag gacaagttga gccgtaaacg
1441 ctcagcttct cctgacggct ccgagagtaa aaagcacata agtcaataat tctatgacat
1501 tatactcgat ctcaatttgg gtagttacgt ttttataata acaagttttg aatgtttgac
1561 gcgttaa
//