Dbfetch

Dbfetch

ID   HLA09832; SV 1; standard; DNA; HUM; 552 BP.
XX
AC   HLA09832;
XX
SV   HLA09832.1
XX
DT   26-JUN-2013 (Rel. 3.13.0, Created, Version 1)
DT   16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 1)
XX
DE   HLA-DQB1*05:02:06, Human MHC Class II sequence (partial)
XX
KW   Human MHC; HLA; Class II; HLA-DQB1; Allele; HLA-DQB1*05:02:06;
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OS   Homo Sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates;
OC   Catarrhini; Hominidae; Homo.
XX
CC   --------------------------------------------------------------------------
CC   IPD-IMGT/HLA Release Version 3.55.0
CC   --------------------------------------------------------------------------
CC   Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative
CC   Commons Attribution-NoDerivs License, see;
CC   http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details.
CC   --------------------------------------------------------------------------
XX
RN   [1]
RP   1-552
RX   PUBMED; 28621482.
RA   Chai X, Zhang H, Yang X, Yang Fm Liu N;
RT   "Identification of 400 novel alleles at the HLA-A, -B, -C, -DRB1, -DQB1
RT   loci from the China Marrow Donor Program.";
RL   HLA 90:171-173(2017).
XX
CC   --------------------------------------------------------------------------
CC   The sequence below is the official allele sequence as approved by the
CC   WHO Nomenclature Committee for Factors of the HLA System.
CC   Any cross references may differ from the sequence shown below.
CC   --------------------------------------------------------------------------
XX
DR   EMBL; HE804231; HE804231.1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..552
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT                   /ethnic="Undefined"
FT                   /cell_line="D10047357"
FT   CDS             join(<1..270,271..552)
FT                   /codon_start=3
FT                   /partial
FT                   /gene="HLA-DQB1"
FT                   /allele="HLA-DQB1*05:02:06"
FT                   /product="MHC Class II HLA-DQB1*05:02:06 sequence"
FT                   /translation="DFVYQFKGLCYFTNGTERVRGVTRHIYNREEYVRFDSDVGVYRAV
FT                   TPQGRPSAEYWNSQKEVLEGARASVDRVCRHNYEVAYRGILQRRVEPTVTISPSRTEAL
FT                   NHHNLLICSVTDFYPSHIKVRWFRNDQEETAGVVSTPLIRNGDWTFQILVMLEMTPQRG
FT                   DVYTCHVEHPSLQSPITVEW"
FT   exon            1..270
FT                   /number="2"
FT   exon            271..552
FT                   /number="3"
SQ   Sequence 552 BP; 123 A; 159 C; 176 G; 94 T; 0 other;
     aggatttcgt gtaccagttt aagggcctgt gctacttcac caacgggacg gagcgcgtgc        60
     ggggtgtgac cagacacatc tataaccgag aggagtacgt gcgcttcgac agcgacgtgg       120
     gggtgtaccg ggcggtgacg ccgcaagggc ggcctagcgc cgagtactgg aacagccaga       180
     aggaagtcct ggagggggcc cgggcgtcgg tggacagagt gtgcagacac aactacgagg       240
     tggcgtaccg cgggatcctg cagaggagag tggagcccac agtgaccatc tccccatcca       300
     ggacagaggc cctcaaccac cacaacctgc tgatctgctc ggtgacagat ttctatccaa       360
     gccacatcaa agtccggtgg tttcggaatg atcaggagga gacagccggc gttgtgtcca       420
     cccccctcat taggaacggt gactggacct tccagatcct ggtgatgctg gaaatgactc       480
     cccagcgtgg agatgtctac acctgccacg tggagcaccc cagcctccag agccccatca       540
     ccgtggagtg gc                                                           552
//