Dbfetch

Dbfetch

ID   HLA09820; SV 1; standard; DNA; HUM; 822 BP.
XX
AC   HLA09820;
XX
SV   HLA09820.1
XX
DT   26-JUN-2013 (Rel. 3.13.0, Created, Version 1)
DT   16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 1)
XX
DE   HLA-C*14:52, Human MHC Class I sequence (partial)
XX
KW   Human MHC; HLA; Class I; HLA-C; Allele; HLA-C*14:52;
XX
OS   Homo Sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates;
OC   Catarrhini; Hominidae; Homo.
XX
CC   --------------------------------------------------------------------------
CC   IPD-IMGT/HLA Release Version 3.55.0
CC   --------------------------------------------------------------------------
CC   Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative
CC   Commons Attribution-NoDerivs License, see;
CC   http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details.
CC   --------------------------------------------------------------------------
XX
RN   [1]
RP   1-822
RX   PUBMED; 24646360.
RA   He J, Dong LN, Wang W, Zhu FM, Lv HJ;
RT   "Sequence-based HLA high-resolution typing of a bine marrow donor/recipient
RT   pair shows the novel HLA allele C*14:52.";
RL   Tissue Antigens 83:366-367(2014).
XX
CC   --------------------------------------------------------------------------
CC   The sequence below is the official allele sequence as approved by the
CC   WHO Nomenclature Committee for Factors of the HLA System.
CC   Any cross references may differ from the sequence shown below.
CC   --------------------------------------------------------------------------
XX
DR   EMBL; KF142385; KF142385.1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..822
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT                   /ethnic="Asian"
FT                   /cell_line="H130190"
FT   CDS             join(<1..270,271..546,547..822)
FT                   /codon_start=3
FT                   /partial
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*14:52"
FT                   /product="MHC Class I HLA-C*14:52 sequence"
FT                   /translation="SHSMRYFSTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRGE
FT                   PRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRNLRGYYNQSEAGSHTLQWMFGCDLGP
FT                   DGRLLRGYDQSAYHGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQRRAYLEGTC
FT                   VEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHEATLRCWALGFYPAEITLTWQWDGED
FT                   QTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPLTLRW"
FT   exon            1..270
FT                   /number="2"
FT   exon            271..546
FT                   /number="3"
FT   exon            547..822
FT                   /number="4"
SQ   Sequence 822 BP; 166 A; 253 C; 289 G; 114 T; 0 other;
     gctcccactc catgaggtat ttctccacat ccgtgtcccg gcccggccgc ggggagcccc        60
     gcttcatcgc agtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg       120
     cgagtccgag aggggagccg cgggcgccgt gggtggagca ggaggggccg gagtattggg       180
     accgggagac acagaagtac aagcgccagg cacagactga ccgagtgagc ctgcggaacc       240
     tgcgcggcta ctacaaccag agcgaggccg ggtctcacac cctccagtgg atgtttggct       300
     gcgacctggg gcccgacggg cgcctcctcc gcgggtatga ccagtccgcc taccacggca       360
     aggattacat cgccctgaac gaggatctgc gctcctggac cgccgcggac acggcggctc       420
     agatcaccca gcgcaagtgg gaggcggccc gtgaggcgga gcagcggaga gcctacctgg       480
     agggcacgtg cgtggagtgg ctccgcagat acctggagaa cgggaaggag acgctgcagc       540
     gcgcggaaca cccaaagaca cacgtgaccc accatcccgt ctctgaccat gaggccaccc       600
     tgaggtgctg ggccctgggc ttctaccctg cggagatcac actgacctgg cagtgggatg       660
     gggaggacca aactcaggac accgagcttg tggagaccag gccagcagga gatggaacct       720
     tccagaagtg ggcagctgtg gtggtgcctt ctggagaaga gcagagatac acgtgccatg       780
     tgcagcacga ggggctgccg gagcccctca ccctgagatg gg                          822
//