Dbfetch
ID HLA09751; SV 2; standard; DNA; HUM; 7004 BP.
XX
AC HLA09751;
XX
SV HLA09751.2
XX
DT 26-JUN-2013 (Rel. 3.13.0, Created, Version 1)
DT 16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 2)
XX
DE HLA-DQB1*06:97, Human MHC Class II sequence
XX
KW Human MHC; HLA; Class II; HLA-DQB1; Allele; HLA-DQB1*06:97;
XX
OS Homo Sapiens (human)
OC Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates;
OC Catarrhini; Hominidae; Homo.
XX
CC --------------------------------------------------------------------------
CC IPD-IMGT/HLA Release Version 3.55.0
CC --------------------------------------------------------------------------
CC Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative
CC Commons Attribution-NoDerivs License, see;
CC http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details.
CC --------------------------------------------------------------------------
XX
RN [1]
RP 1-7004
RX PUBMED; 26812061.
RA Hernandez-Frederick C, Cereb N, Giani AS, Ruppel J, Maraszek A, Pingel J,
RA Sauter J, Schmidt AH, Yang SY;
RT "Detection of 549 new HLA alleles in potential stem cell donors from the
RT United States, Poland and Germany.";
RL HLA 87:31-35(2016).
XX
CC --------------------------------------------------------------------------
CC The sequence below is the official allele sequence as approved by the
CC WHO Nomenclature Committee for Factors of the HLA System.
CC Any cross references may differ from the sequence shown below.
CC --------------------------------------------------------------------------
XX
DR EMBL; KC592343; KC592343.1.
DR EMBL; OQ703107; OQ703107.1.
XX
FH Key Location/Qualifiers
FH
FT source 1..7004
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT /ethnic="Undefined"
FT /cell_line="HG00005896"
FT /cell_line="Wangsi001"
FT CDS join(428..536,1968..2237,4787..5068,5578..5688,6786..6799)
FT /codon_start=1
FT /gene="HLA-DQB1"
FT /allele="HLA-DQB1*06:97"
FT /product="MHC Class II HLA-DQB1*06:97 sequence"
FT /translation="MSWKKALRIPGDLRVATVTLMLAMLSSLLAEGRDSPEDFVFQFKG
FT MCYFTNGTERVRLVTRYIYNREEYARFDSDVGLYRAVTPQGRPDAEYWNSQKEVLEGTR
FT AELDTVCRHNYEVAFRGILQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPGQIKVRW
FT FRNDQEETAGVVSTPLIRNGDWTFQILVMLEMTPQRGDVYTCHVEHPSLQSPITVEWRA
FT QSESAQSKMLSGVGGFVLGLIFLGLGLIIRQRSQKGLLH"
FT UTR 1..427
FT exon 428..536
FT /number="1"
FT intron 537..1967
FT /number="1"
FT exon 1968..2237
FT /number="2"
FT intron 2238..4786
FT /number="2"
FT exon 4787..5068
FT /number="3"
FT intron 5069..5577
FT /number="3"
FT exon 5578..5688
FT /number="4"
FT intron 5689..6152
FT /number="4"
FT exon 6153..6176
FT /number="5"
FT /pseudo
FT intron 6177..6785
FT /number="5"
FT exon 6786..6799
FT /number="6"
FT UTR 6800..7004
SQ Sequence 7004 BP; 1776 A; 1614 C; 1688 G; 1926 T; 0 other;
gaaatatgat ccccacctaa tttgctttat taaaaatccc aagtataata acaactggtt 60
tttaacaata ttacagagat gtttactgtt gaatcgcatt tttttctttt gcctctcaaa 120
atccccgagg cattcgttct tcagctcttc tataatcgag aggaaatttt cacctcagat 180
gttcatccag tacaatttga agacgtcaca gtgccaggca ctggattgag aaccttcaca 240
aaaaaaatgt ctgcccagag acagatgagg tccttcagct ccagtgctga ttggttcttt 300
tccgagggac catccaatcc tgccactcac ggaaacatcc acaggttttt attctttctg 360
ccaggtacat cagatccatc aggtccgagc tgtgttgact accactgctt ttcccttcgt 420
ctcagttatg tcttggaaga aggctttgcg gatccccgga gaccttcggg tagcaactgt 480
caccttgatg ctggcgatgc tgagctccct actggctgag ggcagagact ctcccggtaa 540
gtgcagggca gctgctctcc agagccgcca ctctgggaac aggctctcct tgggctgggg 600
tatgggggat ggtgatctct atgatcttgg acacaatctt tcatcaacat ttcctctctc 660
ttgggaaaga aagctatgtt gcattcccat ttatctttta gtgatgagat gaggacaatc 720
caatccccat cctacaggct taagcctgga agaggaggag agaggagaga aagaggagat 780
aaagtgtaca tttactacca gcgataggac aaagtgagca tggggttatt tttgaagata 840
tgaatttctc caaagacaca gcaggatttg tcatttaggc gtgccccaag actgcctgga 900
cttaggatta tgagatcctg cattggaaaa tgtgaggcag caatggtgtc tgtagtctct 960
gtatttgagg aaaatttgtc tctattcctg accgagtgga gcatttgtgg aggcaaaatc 1020
ttggtgctga gggaagctga ctggctgacc acagagaggg agtcttcggg tttcactgat 1080
ttatgggcaa atggtgactt gagtgggatt cagagacccg agttaatggt ggactgaatt 1140
tagtaggaag gaggatgtaa agaagggaaa taacacatat tgtgaaacca ctcacttcag 1200
acagaacaat actttatata acttctctct cactccttct aacatcctgt gtgtagatat 1260
catgattttc ttttacacaa ttatacttgt gatatggata ttctgttaca taacctgccc 1320
aaactggtga ctgccacagt ttaattggaa tctagtttat caaattcaaa agcttgtgct 1380
ctttccatga ataaatgtct ctatctagga ctcagaggtg taggtccttt ccaacataga 1440
agggagtgaa cctcaacggg acttgggagg gtaaatctag gcatgggaag gaaggtattt 1500
tacccaggga ccaagagaat acgcgtgtca gaacgaggcc aggcttaatt cctggaccta 1560
tctcgtcatt ccgttgaact ctcagattta tgtggataac tttatctctg aggtatccag 1620
gagcttcatg aaaaatggga tttcatgcga gaacgccctg atccctctaa gtgcagaggt 1680
gcatgtaaaa tcagcccgac tgcctcttcg ctgggttcac aggctcaggc agggacaggg 1740
ctttcctccc tttcctggat gtaggaaggc agattccaga agcccgcaaa gaaggcgggc 1800
agagctgggc agagccgccg ggaggatccc aggtctggag cgccaggcac gggcgggcgg 1860
gaactggagg tcgcgcgggc ggttccacag ctccaggccg ggtcagggcg gcggctgcgg 1920
gggcggccgg gctggggcct gactgaccgg ccggtgattc cccgcagagg atttcgtgtt 1980
ccagtttaag ggcatgtgct acttcaccaa cgggacggag cgcgtgcgtc ttgtgaccag 2040
atacatctat aaccgagagg agtacgcgcg cttcgacagc gacgtggggt tgtaccgcgc 2100
ggtgacgccg caggggcggc ctgatgccga gtactggaac agccagaagg aagtcctgga 2160
ggggacccgg gcggagttgg acacggtgtg cagacacaac tacgaggtgg cgttccgcgg 2220
gatcttgcag aggagaggtg agcgtcgtcg cccctccgtg aggcccaccc ttggccgaga 2280
ccccgagttt ctgtgccggg aggggcgatg ggggcgaggt ctctgaaatc tgagcccagt 2340
tcattccacc ccaggggaaa ggaggcggcg gcggggtggt gggggcaggt gcatcggagg 2400
ggcggggacc tagggcagag cagggggaca agcagagttg gccaggctgc ctagtgtccc 2460
ccccagcctc cccgtccgtc ggcctcgtcc tccgctctgc acgtttctcg cctcgtgcct 2520
tatgtgtttg cctcctcgta ccttaccttc gctaagcagt tctctctgcc cccagtgccc 2580
accctcttcc cctgcccgcc ggcctcgcta gcactgcccc acccagcaag gcccacgtgc 2640
gcagcttgcg ccgcaggaag cttcaggctt ggcctggtgg agttagggct gccccacagc 2700
tgcgcgcagg gcatccagca attacagttg cgaaataaga tattttgact ttttggcttc 2760
aaatcattat tcatcgtaat tctgttttct taaatggcta ccactaatgg cggagatctt 2820
tgaggcgaga gactgtttaa ttattgcatg cctggtacct gacacattga ctggtatgtg 2880
gtgtgagctc aatgatcttc tgttaaattc atgaataaat gtactcagct gccaatccag 2940
ttaggttcaa gaaaaaaaca gaggcttaca aatgaacttt atcaattatt ttctaacatt 3000
ttgcttaatg ctttcaagta aactcttact gacttggatc ttaatagaat ttgtgaatac 3060
aaagtctgag gaaaatgtgt ttgctaaaaa taaaaacaat gcttgaatga tgttgtaagg 3120
cagagtttta atttcttaga aaagctgaac aaatagcact atgcaaagat cagaagtttg 3180
ggaataaata ggttgaagct attaaattat tggataaaaa tagtttcagg ttgcttttgg 3240
cctaggttat cccctccccc ccatcactat ccacttcagg aataaacatt ctgaaagtca 3300
attttaccca ttcaggaagc acttatttct agacagttgc cttatcaaat accatctatg 3360
ttatgtcatt taatctcaca gctacctgtg cattagagat tagcatcacc actttatata 3420
tcctaatatt ggtacatgat aaacacttta agtaatcagc ccacaattac tcaccaagat 3480
cttaagcctc ccaaagtaca caacattctt atgttcctca ctacacatat gtagagtcta 3540
agggatgtaa ggccttgtta aagccagttt tgaccagaag cagcaatgag tctattcctg 3600
tttgttctgt gtgttaatgc ggcattgaaa attcatgatt aatcaatccc tagtctgacc 3660
ccggtgttat ctatgcaggt tcacaaaact tttagtttgc tttacactcc cttgccttct 3720
tttgactcac atcctaatgc cagcaagtac ttatattttt gctatttcag ttttatttcc 3780
ataaaattta ttttatcatc ttttctcata aatttgtgcc ctctattttt actcccagtc 3840
tgttgaagat gaacaaatct tataaggcca catagctgac tctgatttca gttggcctcc 3900
aggaaggaga acctaaagaa aagttcaagt ccaagcagaa accatgattc cttccggatg 3960
atggctcaag agtgccattt aattggggtg ccacctgctg acctcagcaa atcccagtta 4020
tatgtatatg ttcacattac aggctcatta gcccaggccg acctctgcac ggatctcaga 4080
atattttctg tggagaacat acacgataat gtctgatttc agaacaagaa agtaattgtc 4140
aatagcaagg aaatggagta gggtagacag ctagtaatta aactcacttg tgcgttaaaa 4200
agaaattaag gaaaaaaaga aaatgagaga acatattact aaataaagaa agcacacatt 4260
aaatatttgc tatagtttca cactaagaga ataaaggaaa tgtgataaag tggcctaaaa 4320
ggaaaggatg agatgtgtaa aagaggcggg gaaagatgtg tcattttttt tactatgagc 4380
agcaatctga gaagataaag gaattgagtt gtggacaaac atgatgtttg atcaagggtt 4440
atttgttttg aaggcctgcc tacttttttt tcaaatatta caaacttttg aaataacatt 4500
ctactttttt ttcaaatatt acaaactttt gaaataacat tctttttgtt ttttgctgtc 4560
tgttactaga ttgcacattc tataaatgca gggaccatag tatgttattt atctttgaat 4620
tctcagtgat tgtcaaattt atatttgttg aatgaacctt aatccaagac ttcgactcca 4680
ggtatctttc cactctggtc caaggaggga tccttcctca tggtagacgt ggtgtgtgtt 4740
ctcacatctc actcctatgt cttttcctgt ctgttactgc cctcagtgga gcccacagtg 4800
accatctccc catccaggac agaggccctc aaccaccaca acctgctggt ctgctcggtg 4860
acagatttct atccaggcca gatcaaagtc cggtggtttc ggaatgatca ggaggagaca 4920
gccggcgttg tgtccacccc ccttattagg aatggtgact ggactttcca gatcctggtg 4980
atgctggaaa tgactcccca gcgtggagat gtctacacct gccacgtgga gcaccccagc 5040
ctccagagcc ccatcaccgt ggagtggcgt aaggggatat tgagtttctg ttactatggg 5100
cccacaagac aaagagctcc ttctgaccca ttccttccca tctcttatcc ctgatgtcac 5160
tactgagctg ggaatcacag gagactagag cacctcttgc tccatggcaa gtgcatcaga 5220
agaatcctgg tctcatcacc tttccagatg ctagggaaat tactctacat actgttgctc 5280
tgaatcccag tcctgatagc tctgagggac tgattcttag ggctggtgac tgggatctta 5340
gggtctaagg ttatggatga gttcttgaag agcagagatt tgcttcccca ctctctcacc 5400
tattcactgt atccaaggac ctattggctg gtctttcccc tccttagggg tggtctgaat 5460
ggagaactag gttcctttga tgccttcacc ttctgcacct cagactggac ttcaactcct 5520
cagcagggat gctatggggt gtggggacaa acacagacac tcagttctgc tctttagggg 5580
ctcagtctga atctgcccag agcaagatgc tgagtggcgt tggaggcttc gtgctggggc 5640
tgatcttcct tgggctgggc cttatcatcc gtcaaaggag tcagaaaggt gaggaacccc 5700
aggggaaaag gggaagatgg gctgtgaccc agaccctctg ttcagagtgg tcctgtctgt 5760
agattagctc tttcctcctg accctgagaa gaagtgcgag gagacaggac aagatgggag 5820
gaggcattgg aatctgattt tactggttga aaggtagcgc tgtcacagag ctgactgata 5880
gagcttattc cagggcatcc ttaccattca tcattgtctc actggctcct ttccaaaagc 5940
ttcctccatt aagagggtca gagcctcagc ttcctttctt tctagtgaca atttcctttg 6000
ttttagggga ttttaaatta gggtgctgaa ggcctggaag aacatgggtg ggaagagaat 6060
gtaactctaa gtcatgtgtg tcattttcct ttggggtgag agagtggctg tttgtgtaat 6120
gagacctttc tctgcataac ttccttttgt aagacctcaa gggcctccac cagcaggtaa 6180
tatttcagcc atgatccagt gtggggaggc acaggtataa gagggaagag catgagctga 6240
gtgtacctga ccacagtggt ccatgttcat ggcctatttg ctgctatgag gatcaagact 6300
taggggagaa gtttgccagt ttctaggaat ctccagacat tgttccccag aaccaagcct 6360
taactttggt ggcatcttct tgtgaaatgt ggagccagaa ccacagctta aatgttagac 6420
actaggatga tgcccacttt gtgccacatg atggtggcta ctgcctgtaa gcattttcca 6480
gtgactgaaa gaggctgcta gtggtcggga agagatatca tccaatttcc taaaaagact 6540
gaacccttca tattccccag aagaataaca gctgttcccc acctcccaca catctgcatc 6600
aagctgaagt tctgtgtcct catgagctga tttcaccttt gcacagatct tgggggaggt 6660
gatgacaata caccctggac ctcaactttc tctgtctgaa gctgcagggg gcccctgaag 6720
ggtgggggag atggcaggcc caccaggata ccctgtgctg atcaatgctc ttctctcttc 6780
tccagggctt ctgcactgac tcctgagact attttaacta ggattggtta tcactcttct 6840
gtgatgcctg cttatgcctg cccagaattc ccagctgcct gtgtcagctt gtccccctga 6900
gatcaaagtc ctacagtggc tgtcacgcag ccaccaggtc atctcctttc atccccaccc 6960
caaggcgctg gctgtgactc tgcttcctgc actgacccag agcc 7004
//