ID HLA07827; SV 1; standard; DNA; HUM; 546 BP.
XX
AC HLA07827;
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SV HLA07827.1
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DT 24-APR-2012 (Rel. 3.9.0, Created, Version 1)
DT 16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 1)
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DE HLA-C*06:78, Human MHC Class I sequence (partial)
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KW Human MHC; HLA; Class I; HLA-C; Allele; HLA-C*06:78;
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OS Homo Sapiens (human)
OC Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates;
OC Catarrhini; Hominidae; Homo.
XX
CC --------------------------------------------------------------------------
CC IPD-IMGT/HLA Release Version 3.55.0
CC --------------------------------------------------------------------------
CC Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative
CC Commons Attribution-NoDerivs License, see;
CC http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details.
CC --------------------------------------------------------------------------
XX
RN [1]
RP 1-546
RX PUBMED; 24571476.
RA Hernandez-Frederick CJ, Giani AS, Cereb N, Silva-Gozalez R, Pingel J,
RA Schmidt AH, Ehninger G, Yang SY;
RT "Identification of 2127 new HLA class I alleles in potential stem cell
RT donors from Germany, the United States and Poland.";
RL Tissue Antigens 83:184-189(2014).
XX
CC --------------------------------------------------------------------------
CC The sequence below is the official allele sequence as approved by the
CC WHO Nomenclature Committee for Factors of the HLA System.
CC Any cross references may differ from the sequence shown below.
CC --------------------------------------------------------------------------
XX
DR EMBL; JN124520; JN124520.1.
XX
FH Key Location/Qualifiers
FH
FT source 1..546
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT /ethnic="Undefined"
FT /cell_line="HG00003233"
FT CDS join(<1..270,271..546)
FT /codon_start=3
FT /partial
FT /gene="HLA-C"
FT /allele="HLA-C*06:78"
FT /product="MHC Class I HLA-C*06:78 sequence"
FT /translation="SHSMRYFDTAVSRPGRGEPRFISVDYVDDTQFVRFDSDAASPRGE
FT PRAPWVEQEGPEYWDRETQKYKRQAQADRVNLRKLRGYYNQSEDGSHTLQWMYGCDLGP
FT DGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQWRAYLEGTC
FT VEWLRRYLENGKETLQRA"
FT exon 1..270
FT /number="2"
FT exon 271..546
FT /number="3"
SQ Sequence 546 BP; 107 A; 170 C; 199 G; 70 T; 0 other;
gctcccactc catgaggtat ttcgacaccg ccgtgtcccg gcccggccgc ggagagcccc 60
gcttcatctc agtggactac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg 120
cgagtccgag aggggagccc cgggcgccgt gggtggagca ggaggggccg gagtattggg 180
accgggagac acagaagtac aagcgccagg cacaggctga ccgagtgaac ctgcggaaac 240
tgcgcggcta ctacaaccag agcgaggacg ggtctcacac cctccagtgg atgtatggct 300
gcgacctggg gcccgacggg cgcctcctcc gcgggtatga ccagtccgcc tacgacggca 360
aggattacat cgccctgaac gaggacctgc gctcctggac cgccgcggac acggcggctc 420
agatcaccca gcgcaagtgg gaggcggccc gtgaggcgga gcagtggaga gcctacctgg 480
agggcacgtg cgtggagtgg ctccgcagat acctggagaa cgggaaggag acgctgcagc 540
gcgcgg 546
//