Dbfetch

Dbfetch

ID   HLA06180; SV 1; standard; DNA; HUM; 552 BP.
XX
AC   HLA06180;
XX
SV   HLA06180.1
XX
DT   30-NOV-2010 (Rel. 3.3.0, Created, Version 1)
DT   16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 1)
XX
DE   HLA-DQB1*06:42, Human MHC Class II sequence (partial)
XX
KW   Human MHC; HLA; Class II; HLA-DQB1; Allele; HLA-DQB1*06:42;
XX
OS   Homo Sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates;
OC   Catarrhini; Hominidae; Homo.
XX
CC   --------------------------------------------------------------------------
CC   IPD-IMGT/HLA Release Version 3.55.0
CC   --------------------------------------------------------------------------
CC   Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative
CC   Commons Attribution-NoDerivs License, see;
CC   http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details.
CC   --------------------------------------------------------------------------
XX
RN   [1]
RP   1-552
RX   PUBMED; 21732917.
RA   Li J, Qu J, Zhang X, Liu Y, Zhang C, Cao H, Zhang W, Wang Y, Chen H, Cheng
RA   G, Huang C, Zheng Z, Shen M, Cheng Z, Tang J, Zhen H, Liao K, Chen C, Yang
RA   H, Tian Z, Zhang H, Hua S, Rao B, Wang N, Zhang Q, Liu T, Chen S, Wang L,
RA   Yi X;
RT   "Characterization of 236 novel alleles at the HLA-A, -B, -C, -DRB1, -DQB1
RT   and -DPB1 loci from the China Marrow Donor Program.";
RL   Tissue Antigens 78:267-270(2011).
XX
CC   --------------------------------------------------------------------------
CC   The sequence below is the official allele sequence as approved by the
CC   WHO Nomenclature Committee for Factors of the HLA System.
CC   Any cross references may differ from the sequence shown below.
CC   --------------------------------------------------------------------------
XX
DR   EMBL; HQ589112; HQ589112.1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..552
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT                   /ethnic="Undefined"
FT                   /cell_line="D10013501"
FT   CDS             join(<1..270,271..552)
FT                   /codon_start=3
FT                   /partial
FT                   /gene="HLA-DQB1"
FT                   /allele="HLA-DQB1*06:42"
FT                   /product="MHC Class II HLA-DQB1*06:42 sequence"
FT                   /translation="DFVYQFKGMCYFTNGTERVRLVTRYIYNREEYARFDSDVGVYRAV
FT                   TPQGRPVAEYWNSQKEVLEGARAELDTVCRHNYEVGYRGILQRRVEPTVTISPSRTEAL
FT                   NHHNLLVCSVTDFYPGQIKVQWFRNDQEETAGVVSTPLIRNGDWTFQILVMLEMTPQRG
FT                   DVYTCHVEHPSLQSPITVEW"
FT   exon            1..270
FT                   /number="2"
FT   exon            271..552
FT                   /number="3"
SQ   Sequence 552 BP; 122 A; 153 C; 176 G; 101 T; 0 other;
     aggatttcgt gtaccagttt aagggcatgt gctacttcac caacgggacg gagcgcgtgc        60
     gtcttgtaac cagatacatc tataaccgag aggagtacgc gcgcttcgac agcgacgtgg       120
     gggtgtaccg ggcggtgacg ccgcaggggc ggcctgttgc cgagtactgg aacagccaga       180
     aggaagtcct ggagggggcc cgggcggagt tggacacggt gtgcagacac aactacgagg       240
     tggggtaccg cgggatcctg cagaggagag tggagcccac agtgaccatc tccccatcca       300
     ggacagaggc cctcaaccac cacaacctgc tggtctgctc ggtgacagat ttctatccag       360
     gccagatcaa agtccagtgg tttcggaatg atcaggagga gacagccggc gttgtgtcca       420
     ccccccttat taggaatggt gactggactt tccagatcct ggtgatgctg gaaatgactc       480
     cccagcgtgg agatgtctac acctgccacg tggagcaccc cagcctccag agccccatca       540
     ccgtggagtg gc                                                           552
//