Dbfetch
ID HLA06071; SV 2; standard; DNA; HUM; 3080 BP.
XX
AC HLA06071;
XX
SV HLA06071.2
XX
DT 31-OCT-2010 (Rel. 3.3.0, Created, Version 1)
DT 16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 2)
XX
DE HLA-C*07:166, Human MHC Class I sequence
XX
KW Human MHC; HLA; Class I; HLA-C; Allele; HLA-C*07:166;
XX
OS Homo Sapiens (human)
OC Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates;
OC Catarrhini; Hominidae; Homo.
XX
CC --------------------------------------------------------------------------
CC IPD-IMGT/HLA Release Version 3.55.0
CC --------------------------------------------------------------------------
CC Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative
CC Commons Attribution-NoDerivs License, see;
CC http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details.
CC --------------------------------------------------------------------------
XX
RN [1]
RP 1-3080
RX PUBMED; 33232566.
RA Balas A, Moreno-Hidalgo MA, Alenda R, Garcia-Sanchez F, Vicario JL;
RT "The genomic full-length characterization of HLA-C*07:166 shows it was
RT likely generated by a recombination event.";
RL HLA 97:239-240(2021).
XX
CC --------------------------------------------------------------------------
CC The sequence below is the official allele sequence as approved by the
CC WHO Nomenclature Committee for Factors of the HLA System.
CC Any cross references may differ from the sequence shown below.
CC --------------------------------------------------------------------------
XX
DR EMBL; FR714923; FR714923.1.
DR EMBL; MW032440; MW032440.
XX
FH Key Location/Qualifiers
FH
FT source 1..3080
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT /ethnic="European, Undefined"
FT /cell_line="1134030"
FT /cell_line="FRFDI05043"
FT CDS join(110..182,313..582,833..1108,1696..1971,2093..2212,
FT 2652..2684,2792..2839,3004..3008)
FT /codon_start=1
FT /gene="HLA-C"
FT /allele="HLA-C*07:166"
FT /product="MHC Class I HLA-C*07:166 sequence"
FT /translation="MRVMAPRALLLLLSGGLALTETWACSHSMRYFDTAVSRPGRGEPR
FT FISVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQNYKRQAQADRVSLRN
FT LRGYYNQSEDGSHTLQRMYGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTA
FT AQITQRKLEAARAAEQLRAYLEGTCVEWLRRYLENGKETLQRAEPPKTHVTHHPLSDHE
FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRY
FT TCHVQHEGLQEPLTLSWEPSSQPTIPIVGIVAGLAVLAVLAVLGAVMAVVMCRRKSSGG
FT KGGSCSQAASSNSAQGSDESLIACKA"
FT UTR 1..109
FT exon 110..182
FT /number="1"
FT intron 183..312
FT /number="1"
FT exon 313..582
FT /number="2"
FT intron 583..832
FT /number="2"
FT exon 833..1108
FT /number="3"
FT intron 1109..1695
FT /number="3"
FT exon 1696..1971
FT /number="4"
FT intron 1972..2092
FT /number="4"
FT exon 2093..2212
FT /number="5"
FT intron 2213..2651
FT /number="5"
FT exon 2652..2684
FT /number="6"
FT intron 2685..2791
FT /number="6"
FT exon 2792..2839
FT /number="7"
FT intron 2840..3003
FT /number="7"
FT exon 3004..3008
FT /number="8"
FT UTR 3009..3080
SQ Sequence 3080 BP; 571 A; 907 C; 971 G; 631 T; 0 other;
ccactcccat tgggtgtcgg gttctagaga agccaatcag cgtctccgca gtcccggttc 60
taaagtcccc agtcacccac ccggactcac attctcccca gaggccgaga tgcgggtcat 120
ggcgccccga gccctcctcc tgctgctctc gggaggcctg gccctgaccg agacctgggc 180
ctgtgagtgc ggggttggga gggaagcggc ctctgcggag aggagcgagg ggcccgcccg 240
gcgagggcgc aggacccggg gagccgcgca gggaggtggg tcgggcgggt ctcagcccct 300
cctcgccccc aggctcccac tccatgaggt atttcgacac cgccgtgtcc cggcccggcc 360
gcggagagcc ccgcttcatc tcagtgggct acgtggacga cacgcagttc gtgcggttcg 420
acagcgacgc cgcgagtccg agaggggagc cgcgggcgcc gtgggtggag caggaggggc 480
cggagtattg ggaccgggag acacagaact acaagcgcca ggcacaggct gaccgagtga 540
gcctgcggaa cctgcgcggc tactacaacc agagcgagga cggtgagtga ccccggcccg 600
gggcgcaggt cacgacccct ccccatcccc cacggacggc ccgggtcgcc ccgagtctcc 660
ccgtctgaga tccaccccaa ggtggatctg cggaacccgc ccagaccctc gaccggagag 720
agccccagtc gcctttaccc ggtttcattt tcggtttagg ccaaaatccc cgcgggttgg 780
tcggggcggg gcggggctcg ggggactggg ctgaccgcgg gggcggggcc agggtctcac 840
accctccaga ggatgtatgg ctgcgacctg gggcccgacg ggcgcctcct ccgcgggtat 900
gaccagtccg cctacgacgg caaggattac atcgccctga acgaggacct gcgctcctgg 960
accgccgcgg acaccgcggc tcagatcacc cagcgcaagt tggaggcggc ccgtgcggcg 1020
gagcagctga gagcctacct ggagggcacg tgcgtggagt ggctccgcag atacctggag 1080
aacgggaagg agacgctgca gcgcgcaggt accaggggca gtggggagcc ttccccatct 1140
cctatagatc tcccgggatg gcctcccacg aggaggggag gaaaatggga tcagcactgg 1200
aatatcgccc tcccttgaat ggagaatggc atgagttttc ctgagtttcc tctgagggcc 1260
ccctctgctc tctaggacaa ttaagggatg aagtctctga ggaaatggag gggaagacag 1320
tccctggaat actgatcagg ggtctccttt gaccactttg accactgcag cagctgtggt 1380
caggctgctg acctttctct caggccttgt tctctgcctc acactcaatg tgtctgaagg 1440
tttgattcca gcttttctga gtcctgcagc ctccactcag gtcaggacca gaagtcgctg 1500
ttcctccctc agagactaga actttccaat gaataggaga ttatcccagg tgcctgtgtc 1560
caggctggcg tctgggttct gtgccgcctt ccccacccca ggtgtcctgt ccattctcag 1620
gatggtcaca tgggcgctgc tggagtgtcc caagagagat gcaaagtgtc tgaattttct 1680
gactcttccc gtcagaaccc ccaaagacac acgtgaccca ccaccccctc tctgaccatg 1740
aggccaccct gaggtgctgg gccctgggct tctaccctgc ggagatcaca ctgacctggc 1800
agcgggatgg ggaggaccag acccaggaca ccgagcttgt ggagaccagg ccagcaggag 1860
atggaacctt ccagaagtgg gcagctgtgg tggtgccttc tggacaagag cagagataca 1920
cgtgccatgt gcagcacgag gggctgcaag agcccctcac cctgagctgg ggtaaggagg 1980
gggatgaggg gtcatgtgtc ttctcaggga aagcagaagt cctggagccc ttcagccggg 2040
tcagggctga ggcttggggg tcagggcccc tcaccttccc ctcctttccc agagccatct 2100
tcccagccca ccatccccat cgtgggcatc gttgctggcc tggctgtcct ggctgtccta 2160
gctgtcctag gagctgtgat ggctgttgtg atgtgtagga ggaagagctc aggtagggaa 2220
ggggtgagga gtggggtctg ggttttcttg tcccactggg agtttcaagc cccaggtaga 2280
agtgtgcccc acctcgttac tggaagcacc atccacacat gggccatccc agcctgggac 2340
cctgtgtgct agcacttact ctgttgtgaa gcacatgaca atgaaggaca gatgtatcac 2400
cttgatgatt atggtgttgg ggtccttgat tccagcattc atgagtcagg ggaaggtccc 2460
tgctaaggac agaccttagg agggcagttg ctccagaacc cacagctgct ttccccgtgt 2520
ttcctgatcc tgccctgggt ctgcagtcat agttctggaa acttctcttg ggtccaagac 2580
taggaggttc ccctaagatc gcatggccct gcctcctccc tgtcccctca cagggcattt 2640
tcttcccaca ggtggaaaag gagggagctg ctctcaggct gcgtgtaagt gatggcggtg 2700
ggcgtgtgga ggagctcacc caccccataa ttcctcttgt cccacatctc ctgcgggctc 2760
tgaccaggtc tttttttttg ttctacccca gccagcaaca gtgcccaggg ctctgatgag 2820
tctctcatcg cttgtaaagg tgagattctg gggagctgaa gtggtctggg gtggggcaga 2880
gggaaaaggc ctaggtaatg gggatccttt gattgggacg tttcgaatgt gtggtgagct 2940
gttcagagtg tcatcactta ccatgactga cctgaatttg ttcatgacta ttgtgttctg 3000
tagcctgaga cagctgcctg tgtgggactg agatgcagga tttcttcaca cctctccttt 3060
gtgacttcaa gagcctctgg 3080
//