Dbfetch

ID   HLA06071; SV 2; standard; DNA; HUM; 3080 BP.
XX
AC   HLA06071;
XX
SV   HLA06071.2
XX
DT   31-OCT-2010 (Rel. 3.3.0, Created, Version 1)
DT   16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 2)
XX
DE   HLA-C*07:166, Human MHC Class I sequence
XX
KW   Human MHC; HLA; Class I; HLA-C; Allele; HLA-C*07:166;
XX
OS   Homo Sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates;
OC   Catarrhini; Hominidae; Homo.
XX
CC   --------------------------------------------------------------------------
CC   IPD-IMGT/HLA Release Version 3.55.0
CC   --------------------------------------------------------------------------
CC   Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative
CC   Commons Attribution-NoDerivs License, see;
CC   http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details.
CC   --------------------------------------------------------------------------
XX
RN   [1]
RP   1-3080
RX   PUBMED; 33232566.
RA   Balas A, Moreno-Hidalgo MA, Alenda R, Garcia-Sanchez F, Vicario JL;
RT   "The genomic full-length characterization of HLA-C*07:166 shows it was
RT   likely generated by a recombination event.";
RL   HLA 97:239-240(2021).
XX
CC   --------------------------------------------------------------------------
CC   The sequence below is the official allele sequence as approved by the
CC   WHO Nomenclature Committee for Factors of the HLA System.
CC   Any cross references may differ from the sequence shown below.
CC   --------------------------------------------------------------------------
XX
DR   EMBL; FR714923; FR714923.1.
DR   EMBL; MW032440; MW032440.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..3080
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT                   /ethnic="European, Undefined"
FT                   /cell_line="1134030"
FT                   /cell_line="FRFDI05043"
FT   CDS             join(110..182,313..582,833..1108,1696..1971,2093..2212,
FT                   2652..2684,2792..2839,3004..3008)
FT                   /codon_start=1
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*07:166"
FT                   /product="MHC Class I HLA-C*07:166 sequence"
FT                   /translation="MRVMAPRALLLLLSGGLALTETWACSHSMRYFDTAVSRPGRGEPR
FT                   FISVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQNYKRQAQADRVSLRN
FT                   LRGYYNQSEDGSHTLQRMYGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTA
FT                   AQITQRKLEAARAAEQLRAYLEGTCVEWLRRYLENGKETLQRAEPPKTHVTHHPLSDHE
FT                   ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRY
FT                   TCHVQHEGLQEPLTLSWEPSSQPTIPIVGIVAGLAVLAVLAVLGAVMAVVMCRRKSSGG
FT                   KGGSCSQAASSNSAQGSDESLIACKA"
FT   UTR             1..109
FT   exon            110..182
FT                   /number="1"
FT   intron          183..312
FT                   /number="1"
FT   exon            313..582
FT                   /number="2"
FT   intron          583..832
FT                   /number="2"
FT   exon            833..1108
FT                   /number="3"
FT   intron          1109..1695
FT                   /number="3"
FT   exon            1696..1971
FT                   /number="4"
FT   intron          1972..2092
FT                   /number="4"
FT   exon            2093..2212
FT                   /number="5"
FT   intron          2213..2651
FT                   /number="5"
FT   exon            2652..2684
FT                   /number="6"
FT   intron          2685..2791
FT                   /number="6"
FT   exon            2792..2839
FT                   /number="7"
FT   intron          2840..3003
FT                   /number="7"
FT   exon            3004..3008
FT                   /number="8"
FT   UTR             3009..3080
SQ   Sequence 3080 BP; 571 A; 907 C; 971 G; 631 T; 0 other;
     ccactcccat tgggtgtcgg gttctagaga agccaatcag cgtctccgca gtcccggttc        60
     taaagtcccc agtcacccac ccggactcac attctcccca gaggccgaga tgcgggtcat       120
     ggcgccccga gccctcctcc tgctgctctc gggaggcctg gccctgaccg agacctgggc       180
     ctgtgagtgc ggggttggga gggaagcggc ctctgcggag aggagcgagg ggcccgcccg       240
     gcgagggcgc aggacccggg gagccgcgca gggaggtggg tcgggcgggt ctcagcccct       300
     cctcgccccc aggctcccac tccatgaggt atttcgacac cgccgtgtcc cggcccggcc       360
     gcggagagcc ccgcttcatc tcagtgggct acgtggacga cacgcagttc gtgcggttcg       420
     acagcgacgc cgcgagtccg agaggggagc cgcgggcgcc gtgggtggag caggaggggc       480
     cggagtattg ggaccgggag acacagaact acaagcgcca ggcacaggct gaccgagtga       540
     gcctgcggaa cctgcgcggc tactacaacc agagcgagga cggtgagtga ccccggcccg       600
     gggcgcaggt cacgacccct ccccatcccc cacggacggc ccgggtcgcc ccgagtctcc       660
     ccgtctgaga tccaccccaa ggtggatctg cggaacccgc ccagaccctc gaccggagag       720
     agccccagtc gcctttaccc ggtttcattt tcggtttagg ccaaaatccc cgcgggttgg       780
     tcggggcggg gcggggctcg ggggactggg ctgaccgcgg gggcggggcc agggtctcac       840
     accctccaga ggatgtatgg ctgcgacctg gggcccgacg ggcgcctcct ccgcgggtat       900
     gaccagtccg cctacgacgg caaggattac atcgccctga acgaggacct gcgctcctgg       960
     accgccgcgg acaccgcggc tcagatcacc cagcgcaagt tggaggcggc ccgtgcggcg      1020
     gagcagctga gagcctacct ggagggcacg tgcgtggagt ggctccgcag atacctggag      1080
     aacgggaagg agacgctgca gcgcgcaggt accaggggca gtggggagcc ttccccatct      1140
     cctatagatc tcccgggatg gcctcccacg aggaggggag gaaaatggga tcagcactgg      1200
     aatatcgccc tcccttgaat ggagaatggc atgagttttc ctgagtttcc tctgagggcc      1260
     ccctctgctc tctaggacaa ttaagggatg aagtctctga ggaaatggag gggaagacag      1320
     tccctggaat actgatcagg ggtctccttt gaccactttg accactgcag cagctgtggt      1380
     caggctgctg acctttctct caggccttgt tctctgcctc acactcaatg tgtctgaagg      1440
     tttgattcca gcttttctga gtcctgcagc ctccactcag gtcaggacca gaagtcgctg      1500
     ttcctccctc agagactaga actttccaat gaataggaga ttatcccagg tgcctgtgtc      1560
     caggctggcg tctgggttct gtgccgcctt ccccacccca ggtgtcctgt ccattctcag      1620
     gatggtcaca tgggcgctgc tggagtgtcc caagagagat gcaaagtgtc tgaattttct      1680
     gactcttccc gtcagaaccc ccaaagacac acgtgaccca ccaccccctc tctgaccatg      1740
     aggccaccct gaggtgctgg gccctgggct tctaccctgc ggagatcaca ctgacctggc      1800
     agcgggatgg ggaggaccag acccaggaca ccgagcttgt ggagaccagg ccagcaggag      1860
     atggaacctt ccagaagtgg gcagctgtgg tggtgccttc tggacaagag cagagataca      1920
     cgtgccatgt gcagcacgag gggctgcaag agcccctcac cctgagctgg ggtaaggagg      1980
     gggatgaggg gtcatgtgtc ttctcaggga aagcagaagt cctggagccc ttcagccggg      2040
     tcagggctga ggcttggggg tcagggcccc tcaccttccc ctcctttccc agagccatct      2100
     tcccagccca ccatccccat cgtgggcatc gttgctggcc tggctgtcct ggctgtccta      2160
     gctgtcctag gagctgtgat ggctgttgtg atgtgtagga ggaagagctc aggtagggaa      2220
     ggggtgagga gtggggtctg ggttttcttg tcccactggg agtttcaagc cccaggtaga      2280
     agtgtgcccc acctcgttac tggaagcacc atccacacat gggccatccc agcctgggac      2340
     cctgtgtgct agcacttact ctgttgtgaa gcacatgaca atgaaggaca gatgtatcac      2400
     cttgatgatt atggtgttgg ggtccttgat tccagcattc atgagtcagg ggaaggtccc      2460
     tgctaaggac agaccttagg agggcagttg ctccagaacc cacagctgct ttccccgtgt      2520
     ttcctgatcc tgccctgggt ctgcagtcat agttctggaa acttctcttg ggtccaagac      2580
     taggaggttc ccctaagatc gcatggccct gcctcctccc tgtcccctca cagggcattt      2640
     tcttcccaca ggtggaaaag gagggagctg ctctcaggct gcgtgtaagt gatggcggtg      2700
     ggcgtgtgga ggagctcacc caccccataa ttcctcttgt cccacatctc ctgcgggctc      2760
     tgaccaggtc tttttttttg ttctacccca gccagcaaca gtgcccaggg ctctgatgag      2820
     tctctcatcg cttgtaaagg tgagattctg gggagctgaa gtggtctggg gtggggcaga      2880
     gggaaaaggc ctaggtaatg gggatccttt gattgggacg tttcgaatgt gtggtgagct      2940
     gttcagagtg tcatcactta ccatgactga cctgaatttg ttcatgacta ttgtgttctg      3000
     tagcctgaga cagctgcctg tgtgggactg agatgcagga tttcttcaca cctctccttt      3060
     gtgacttcaa gagcctctgg                                                  3080
//