Dbfetch
ID HLA05938; SV 2; standard; DNA; HUM; 3335 BP. XX AC HLA05938; XX SV HLA05938.2 XX DT 31-OCT-2010 (Rel. 3.3.0, Created, Version 1) DT 16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 2) XX DE HLA-A*68:67, Human MHC Class I sequence XX KW Human MHC; HLA; Class I; HLA-A; Allele; HLA-A*68:67; XX OS Homo Sapiens (human) OC Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates; OC Catarrhini; Hominidae; Homo. XX CC -------------------------------------------------------------------------- CC IPD-IMGT/HLA Release Version 3.55.0 CC -------------------------------------------------------------------------- CC Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative CC Commons Attribution-NoDerivs License, see; CC http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details. CC -------------------------------------------------------------------------- XX RN [1] RP 1-3335 RX PUBMED; 30117314. RA Lazaro A, Hou L, Tu B, Masaberg C, Enriquez E, Gerfen J, Kariyawasam K, RA Persaud M, Qin X, Simbulan D, Xiao Y, Xun L, Yang R, Ng J, Hurley CK; RT "Full gene HLA class I sequences of 79 novel and 519 mostly uncommon RT alleles from a large United States registry population."; RL HLA 92:304-309(2018). XX CC -------------------------------------------------------------------------- CC The sequence below is the official allele sequence as approved by the CC WHO Nomenclature Committee for Factors of the HLA System. CC Any cross references may differ from the sequence shown below. CC -------------------------------------------------------------------------- XX DR EMBL; GQ199662; GQ199662.1. DR EMBL; JN124019; JN124019.1. DR EMBL; MF474211; MF474211.1. XX FH Key Location/Qualifiers FH FT source 1..3335 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT /ethnic="African descent, Undefined" FT /cell_line="HG00002694" FT /cell_line="HN-6149053" FT /cell_line="NT01492" FT CDS join(119..191,322..591,833..1108,1709..1984,2084..2200, FT 2639..2671,2814..2861,3031..3035) FT /codon_start=1 FT /gene="HLA-A" FT /allele="HLA-A*68:67" FT /product="MHC Class I HLA-A*68:67 sequence" FT /translation="MAVMAPRTLVLLLSGALALTQTWAGSHSMRYFYTSMSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDRNTRNVKAQSQTDRVDLGT FT LRGYYNQSEAGSHTIQRMYGCDVGPDGRFLRGYHQYAYDRKDYIALKEDLRSWTAADMA FT AQTTKHKWEAAHVAEQWRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHE FT ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWVAVVVPSGQEQRY FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVITGAVVAAVMWRRKSSDRK FT GGSYSQAASSDSAQGSDVSLTACKV" FT UTR 1..118 FT exon 119..191 FT /number="1" FT intron 192..321 FT /number="1" FT exon 322..591 FT /number="2" FT intron 592..832 FT /number="2" FT exon 833..1108 FT /number="3" FT intron 1109..1708 FT /number="3" FT exon 1709..1984 FT /number="4" FT intron 1985..2083 FT /number="4" FT exon 2084..2200 FT /number="5" FT intron 2201..2638 FT /number="5" FT exon 2639..2671 FT /number="6" FT intron 2672..2813 FT /number="6" FT exon 2814..2861 FT /number="7" FT intron 2862..3030 FT /number="7" FT exon 3031..3035 FT /number="8" FT UTR 3036..3335 SQ Sequence 3335 BP; 645 A; 965 C; 1009 G; 716 T; 0 other; ccagttctca ctcccattgg gtgtcgggtt tccagagaag ccaatcagtg tcgtcgcggt 60 cgcggttcta aagtccgcac gcacccaccg ggactcagat tctccccaga cgccgaggat 120 ggccgtcatg gcgccccgaa ccctcgtcct gctactctcg ggggccctgg ccctgaccca 180 gacctgggcg ggtgagtgcg gggtcgggag ggaaacggcc tctgtgggga gaagcaaggg 240 gcccgcccgg cgggggcgca ggacccggga agccgcgcct ggaggagggt cgggcgggtc 300 tcagccactc ctcgccccca ggctcccact ccatgaggta tttctacacc tccatgtccc 360 ggcccggccg cggggagccc cgcttcatcg ccgtgggcta cgtggacgac acgcagttcg 420 tgcggttcga cagcgacgcc gcgagccaga ggatggagcc gcgggcgccg tggatagagc 480 aggaggggcc ggagtattgg gaccggaaca cacggaatgt gaaggcccag tcacagactg 540 accgagtgga cctggggacc ctgcgcggct actacaacca gagcgaggcc ggtgagtgac 600 cccggcccgg ggcgcaggtc acgacccctc atcccccacg gacgggccag gtcgcccaca 660 gtctccgggt ccgagatccg ccccgaagcc gcgggacccc gagacccttg ccccgggaga 720 ggcccaggcg cctttacccg gtttcatttt cagtttaggc caaaaatccc cccgggttgg 780 tcggggcggg gcggggctcg ggggaccggg ctgacctcgg ggtccgggcc aggttctcac 840 accatccaga ggatgtatgg ctgcgacgtg gggccggacg ggcgcttcct ccgcgggtac 900 caccagtacg cctacgaccg caaggattac atcgccctga aagaggacct gcgctcttgg 960 accgcggcgg acatggcagc tcagaccacc aagcacaagt gggaggcggc ccatgtggcg 1020 gagcagtgga gagcctacct ggagggcacg tgcgtggagt ggctccgcag atacctggag 1080 aacgggaagg agacgctgca gcgcacgggt accaggggcc acggggcgcc tccctgatcg 1140 cctgtagatc tcccgggctg gcctcccaca aggaggggag acaattggga ccaacactag 1200 aatatcgccc tccctctggt cctgagggag aggaatcctc ctgggtttcc agatcctgta 1260 ccagagagtg actctgaggt tccgccctgc tctctgacac aattaaggga taaaatctct 1320 gaaggaatga cgggaagacg atccctcgaa tactgatgag tggttccctt tgacacacac 1380 aggcagcagc cttgggcccg tgacttttcc tctcaggcct tgttctctgc ttcacactca 1440 atgtgtgtgg gggtctgagt ccagcacttc tgagtccctc agcctccact caggtcagga 1500 ccagaagtcg ctgttccctc ttcagggact agaattttcc acggaatagg agattatccc 1560 aggtgcctgt gtccaggctg gtgtctgggt tctgtgctcc cttccccatc ccaggtgtcc 1620 tgtccattct caagatagcc acatgtgtgc tggaggagtg tcccatgaca gatgcaaaat 1680 gcctgaatga tctgactctt cctgacagac gcccccaaaa cgcatatgac tcaccacgct 1740 gtctctgacc atgaagccac cctgaggtgc tgggccctga gcttctaccc tgcggagatc 1800 acactgacct ggcagcggga tggggaggac cagacccagg acacggagct cgtggagacc 1860 aggcctgcag gggatggaac cttccagaag tgggtggctg tggtggtgcc ttctggacag 1920 gagcagagat acacctgcca tgtgcagcat gagggtttgc ccaagcccct caccctgaga 1980 tggggtaagg agggagacgg gggtgtcatg tcttttaggg aaagcaggag cctctctgac 2040 ctttagcagg gtcagggccc ctcaccttcc cctcttttcc cagagccgtc ttcccagccc 2100 accatcccca tcgtgggcat cattgctggc ctggttctct ttggagctgt gatcactgga 2160 gctgtggtcg ctgctgtgat gtggaggagg aagagctcag gtggggaagg ggtgaagggt 2220 gggtctgaga tttcttgtct cactgagggt tccaagaccc aggtagaagt gtgccctgcc 2280 tcgttactgg gaagcaccac ccacaattat gggcctaccc agcctgggcc ctgtgtgcca 2340 gcacttactc ttttgtaaag cacctgttaa aatgaaggac agatttatca ccttgattac 2400 agcggtgatg ggacctgatc ccagcagtca caagtcacag gggaaggtcc ctgaggacct 2460 tcaggagggc ggttggtcca ggacccacac ctgctttctt catgtttcct gatcccgccc 2520 tgggtctgca gtcacacatt tctggaaact tctctgaggt ccaagacttg gaggttcctc 2580 taggacctta aggccctgac tcctttctgg tatctcacag gacattttct tcccacagat 2640 agaaaaggag ggagctactc tcaggctgca agtaagtatg aaggaggctg atgcctgagg 2700 tccttgggat attgtgtttg ggagcccatg ggggagctca cccaccccac aattcctcct 2760 ctagccacat cttctgtggg atctgaccag gttctgtttt tgttctaccc caggcagtga 2820 cagtgcccag ggctctgatg tgtctctcac agcttgtaaa ggtgagagcc tggagggcct 2880 gatgtgtgtt gggtgttggg cggaacagtg gacacagctg tgctatgggg tttctttcca 2940 ttggatgtat tgagcatgcg atgggctgtt taaagtgtga cccctcactg tgacagatac 3000 gaatttgttc atgaatattt ttttctatag tgtgagacag ctgccttgtg tgggactgag 3060 aggcaagagt tgttcctgcc cttccctttg tgacttgaag aaccctgact ttgtttctgc 3120 aaaggcacct gcatgtgtct gtgttcgtgt aggcataatg tgaggaggtg gggagaccac 3180 cccaccccca tgtccaccat gaccctcttc ccacgctgac ctgtgctccc tccccaatca 3240 tctttcctgt tccagagagg tggggctgag gtgtctccat ctctgtctca acttcatggt 3300 gcactgagct gtaacttctt ccttccctat taaaa 3335 //