Dbfetch

Dbfetch

ID   HLA05883; SV 1; standard; DNA; HUM; 546 BP.
XX
AC   HLA05883;
XX
SV   HLA05883.1
XX
DT   30-SEP-2010 (Rel. 3.2.0, Created, Version 1)
DT   16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 1)
XX
DE   HLA-C*04:81, Human MHC Class I sequence (partial)
XX
KW   Human MHC; HLA; Class I; HLA-C; Allele; HLA-C*04:81;
XX
OS   Homo Sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates;
OC   Catarrhini; Hominidae; Homo.
XX
CC   --------------------------------------------------------------------------
CC   IPD-IMGT/HLA Release Version 3.55.0
CC   --------------------------------------------------------------------------
CC   Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative
CC   Commons Attribution-NoDerivs License, see;
CC   http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details.
CC   --------------------------------------------------------------------------
XX
RN   [1]
RP   1-546
RX   PUBMED; 21732917.
RA   Li J, Qu J, Zhang X, Liu Y, Zhang C, Cao H, Zhang W, Wang Y, Chen H, Cheng
RA   G, Huang C, Zheng Z, Shen M, Cheng Z, Tang J, Zhen H, Liao K, Chen C, Yang
RA   H, Tian Z, Zhang H, Hua S, Rao B, Wang N, Zhang Q, Liu T, Chen S, Wang L,
RA   Yi X;
RT   "Characterization of 236 novel alleles at the HLA-A, -B, -C, -DRB1, -DQB1
RT   and -DPB1 loci from the China Marrow Donor Program.";
RL   Tissue Antigens 78:267-270(2011).
XX
CC   --------------------------------------------------------------------------
CC   The sequence below is the official allele sequence as approved by the
CC   WHO Nomenclature Committee for Factors of the HLA System.
CC   Any cross references may differ from the sequence shown below.
CC   --------------------------------------------------------------------------
XX
DR   EMBL; FR690464; FR690464.1.
DR   EMBL; JN123870; JN123870.1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..546
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT                   /ethnic="Asian, Undefined"
FT                   /cell_line="D10008515"
FT                   /cell_line="HG00002606"
FT   CDS             join(<1..270,271..546)
FT                   /codon_start=3
FT                   /partial
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*04:81"
FT                   /product="MHC Class I HLA-C*04:81 sequence"
FT                   /translation="SHSMRYFSTSVSWPGRGEPRFIAVGYVDDTQFVRFDSDAASPRGE
FT                   PREPWVEQEEPEYWDRETQKYKRQAQADRVNLRKLRGYYNQSEDGSHTLQRMFGCDLGP
FT                   DGRLLRGYNQFAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQRRAYLEGTC
FT                   VEWLRRYLENGKETLQRA"
FT   exon            1..270
FT                   /number="2"
FT   exon            271..546
FT                   /number="3"
SQ   Sequence 546 BP; 109 A; 165 C; 199 G; 73 T; 0 other;
     gctcccactc catgaggtat ttctccacat ccgtgtcctg gcccggccgc ggggagcccc        60
     gcttcatcgc agtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg       120
     cgagtccaag aggggagccg cgggagccgt gggtggagca ggaggagccg gagtattggg       180
     accgggagac acagaagtac aagcgccagg cacaggctga ccgagtgaac ctgcggaaac       240
     tgcgcggcta ctacaaccag agcgaggacg ggtctcacac cctccagagg atgtttggct       300
     gcgacctggg gccggacggg cgcctcctcc gcgggtataa ccagttcgcc tacgacggca       360
     aggattacat cgccctgaac gaggatctgc gctcctggac cgccgcggac acggcggctc       420
     agatcaccca gcgcaagtgg gaggcggccc gtgaggcgga gcagcggaga gcctacctgg       480
     agggcacgtg cgtggagtgg ctccgcagat acctggagaa cgggaaggag acgctgcagc       540
     gcgcgg                                                                  546
//