Dbfetch
ID HLA05789; SV 1; standard; DNA; HUM; 2976 BP. XX AC HLA05789; XX SV HLA05789.1 XX DT 31-AUG-2010 (Rel. 3.2.0, Created, Version 1) DT 16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 1) XX DE HLA-C*14:23, Human MHC Class I sequence XX KW Human MHC; HLA; Class I; HLA-C; Allele; HLA-C*14:23; XX OS Homo Sapiens (human) OC Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates; OC Catarrhini; Hominidae; Homo. XX CC -------------------------------------------------------------------------- CC IPD-IMGT/HLA Release Version 3.55.0 CC -------------------------------------------------------------------------- CC Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative CC Commons Attribution-NoDerivs License, see; CC http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details. CC -------------------------------------------------------------------------- XX RN [1] RP 1-2976 RX PUBMED; 21732917. RA Li J, Qu J, Zhang X, Liu Y, Zhang C, Cao H, Zhang W, Wang Y, Chen H, Cheng RA G, Huang C, Zheng Z, Shen M, Cheng Z, Tang J, Zhen H, Liao K, Chen C, Yang RA H, Tian Z, Zhang H, Hua S, Rao B, Wang N, Zhang Q, Liu T, Chen S, Wang L, RA Yi X; RT "Characterization of 236 novel alleles at the HLA-A, -B, -C, -DRB1, -DQB1 RT and -DPB1 loci from the China Marrow Donor Program."; RL Tissue Antigens 78:267-270(2011). XX CC -------------------------------------------------------------------------- CC The sequence below is the official allele sequence as approved by the CC WHO Nomenclature Committee for Factors of the HLA System. CC Any cross references may differ from the sequence shown below. CC -------------------------------------------------------------------------- XX DR EMBL; FR675927; FR675927.1. XX FH Key Location/Qualifiers FH FT source 1..2976 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT /ethnic="Asian" FT /cell_line="D10006051" FT CDS join(39..111,242..511,758..1033,1621..1896,2018..2137, FT 2577..2609,2717..2764,2929..2933) FT /codon_start=1 FT /gene="HLA-C" FT /allele="HLA-C*14:23" FT /product="MHC Class I HLA-C*14:23 sequence" FT /translation="MRVMAPRTLILLLSGALALTETWACSHSMRYFSTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRN FT LRGYYNQSEAGSHTLQWMFGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAAREAEQRRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLLEPLTLRWEPSSQPTIPIVGIVAGLAVLAVLAVLGAVVAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" FT UTR 1..38 FT exon 39..111 FT /number="1" FT intron 112..241 FT /number="1" FT exon 242..511 FT /number="2" FT intron 512..757 FT /number="2" FT exon 758..1033 FT /number="3" FT intron 1034..1620 FT /number="3" FT exon 1621..1896 FT /number="4" FT intron 1897..2017 FT /number="4" FT exon 2018..2137 FT /number="5" FT intron 2138..2576 FT /number="5" FT exon 2577..2609 FT /number="6" FT intron 2610..2716 FT /number="6" FT exon 2717..2764 FT /number="7" FT intron 2765..2928 FT /number="7" FT exon 2929..2933 FT /number="8" FT UTR 2934..2976 SQ Sequence 2976 BP; 554 A; 859 C; 953 G; 610 T; 0 other; gtcacccacc cggactcaga ttctccccag acgccgagat gcgggtcatg gcgccccgaa 60 ccctcatcct gctgctctcg ggagccctgg ccctgaccga gacctgggcc tgtgagtgcg 120 gggttaggag ggaaacggcc tctgcggaga ggagcgaggg gcccgcccgg cgagggcgca 180 ggacccgggg agccgcgcag ggaggagggt cgggcgggtc tcagccactc ctcgtcccca 240 ggctcccact ccatgaggta tttctccaca tccgtgtccc ggcccggccg cggggagccc 300 cgcttcatcg cagtgggcta cgtggacgac acgcagttcg tgcggttcga cagcgacgcc 360 gcgagtccga gaggggagcc gcgggcgccg tgggtggagc aggaggggcc ggagtattgg 420 gaccgggaga cacagaagta caagcgccag gcacagactg accgagtgag cctgcggaac 480 ctgcgcggct actacaacca gagcgaggcc ggtgagtgac cccggcccgg ggcgcaggtc 540 acgacccctc cccatccccc acggacggcc cgggtcgccc cgagtctccc cgtctgagat 600 ccaccccgag gctgcggaac ccgcccagac cctcgaccgg agagagcccc agtcaccttt 660 acccggtttc attttcagtt taggccaaaa tccccgcggg ttggtcggga ctggggcggg 720 gctcggggga cggggctgac cacgggggcg gggccagggt ctcacaccct ccagtggatg 780 tttggctgcg acctggggcc cgacgggcgc ctcctccgcg ggtatgacca gtccgcctac 840 gacggcaagg attacatcgc cctgaacgag gatctgcgct cctggaccgc cgcggacacg 900 gcggctcaga tcacccagcg caagtgggag gcggcccgtg aggcggagca gcggagagcc 960 tacctggagg gcacgtgcgt ggagtggctc cgcagatacc tggagaacgg gaaggagacg 1020 ctgcagcgcg cgggtaccag gggcagtggg gagccttccc catctcccgt agatctcccg 1080 ggatggcctc ccacgaggag gggaggaaaa tgggatcagc gctagaatat cgccctccct 1140 tgaatggaga atgggatgag ttttcctgag tttcctctga gggccccctc tgctctctag 1200 gacaattaag ggatgaagtc cttgaggaaa tggaggggaa gacagtccct ggaatactga 1260 tcaggggtcc cctttgacca ctttgaccac tgcagcagct gtggtcaggc tgctgacctt 1320 tctctcaggc cttgttctct gcctcacgct caatgtgttt gaaggtttga ttccagcttt 1380 tctgagtcct tcggcctcca ctcaggtcag gaccagaagt cgctgttcct ccctcagaga 1440 ctagaacttt ccaatgaata ggagattatc ccaggtgcct gtgtccaggc tggcgtctgg 1500 gttctgtgcc cccttcccca ccccaggtgt cctgtccatt ctcaggatgg tcacatgggc 1560 gctgttggag tgtcgcaaga gagatacaaa gtgtctgaat tttctgactc ttcccgtcag 1620 aacacccaaa gacacacgtg acccaccatc ccgtctctga ccatgaggcc accctgaggt 1680 gctgggccct gggcttctac cctgcggaga tcacactgac ctggcagtgg gatggggagg 1740 accaaactca ggacaccgag cttgtggaga ccaggccagc aggagatgga accttccaga 1800 agtgggcagc tgtggtggtg ccttctggag aagagcagag atacacgtgc catgtgcagc 1860 acgaggggct gctggagccc ctcaccctga gatggggtaa ggagggggat gaggggtgat 1920 gtgtcttctc agggaaagca gaagtcctgg agcccttcag ccgggtcagg gctgaggctt 1980 ggaggtcagg gcccctcacc ttcccctcct ttcccagagc cgtcttccca gcccaccatc 2040 cccatcgtgg gcatcgttgc tggcctggct gtcctggctg tcctagctgt cctaggagct 2100 gtggtggctg ttgtgatgtg taggaggaag agctcaggta gggaaggggt gaggagtggg 2160 gtctgggttt tcttgttcca ctgggagttt caagccccag gtagaagtgt gccccacctc 2220 gttactggaa gcaccatcca cacatgggcc atcccagcct gggaccctgt gtgccagcac 2280 ttactctgtt gtgaagcaca tgacaatgaa ggacagatgt atcaccttga tgattatggt 2340 gttggggtcc ttgattccag cattcatgag tcaggggaag gtccctgcta aggacagacc 2400 ttaggagggc agttgcttca ggacccacag ctgctttccc cgtgtttcct gatcctgccc 2460 tgggtctgca gtcatagttc tggaaacttc tcttgggtcc aagactagga ggttccccta 2520 agatcgcatg gccctgcctc ctccctgtcc cctcacaggg cattttcttc ccacaggtgg 2580 aaaaggaggg agctgctctc aggctgcgtg taagtgatgg cggtgggcgt gtggaggagc 2640 tcacccaccc cataattcct cttgtcccac atctcctgcg ggctctgacc aggtcttttt 2700 ttttgttcta ccccagccag caacagtgcc cagggctctg atgagtctct catcgcttgt 2760 aaaggtgaga ttctggggag ctgaagtggt cgggggtggg gcagagggaa aaggcctggg 2820 taatggggat cctttgattg ggacgtttcg aatgtgtggt gagctgttca gagtgtcatc 2880 acttaccatg actgacctga atttgttcat gactattgtg ttctgtagcc tgagacagct 2940 gcctgtgtgg gactgagatg caggatttct tcacac 2976 //