Dbfetch
ID HLA05417; SV 1; standard; DNA; HUM; 3057 BP. XX AC HLA05417; XX SV HLA05417.1 XX DT 30-JUN-2010 (Rel. 3.1.0, Created, Version 1) DT 16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 1) XX DE HLA-C*01:02:11, Human MHC Class I sequence XX KW Human MHC; HLA; Class I; HLA-C; Allele; HLA-C*01:02:11; XX OS Homo Sapiens (human) OC Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates; OC Catarrhini; Hominidae; Homo. XX CC -------------------------------------------------------------------------- CC IPD-IMGT/HLA Release Version 3.55.0 CC -------------------------------------------------------------------------- CC Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative CC Commons Attribution-NoDerivs License, see; CC http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details. CC -------------------------------------------------------------------------- XX RN [1] RP 1-3057 RX PUBMED; 21732917. RA Li J, Qu J, Zhang X, Liu Y, Zhang C, Cao H, Zhang W, Wang Y, Chen H, Cheng RA G, Huang C, Zheng Z, Shen M, Cheng Z, Tang J, Zhen H, Liao K, Chen C, Yang RA H, Tian Z, Zhang H, Hua S, Rao B, Wang N, Zhang Q, Liu T, Chen S, Wang L, RA Yi X; RT "Characterization of 236 novel alleles at the HLA-A, -B, -C, -DRB1, -DQB1 RT and -DPB1 loci from the China Marrow Donor Program."; RL Tissue Antigens 78:267-270(2011). XX CC -------------------------------------------------------------------------- CC The sequence below is the official allele sequence as approved by the CC WHO Nomenclature Committee for Factors of the HLA System. CC Any cross references may differ from the sequence shown below. CC -------------------------------------------------------------------------- XX DR EMBL; FN908174; FN908174.1. XX FH Key Location/Qualifiers FH FT source 1..3057 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT /ethnic="Asian" FT /cell_line="D10001094" FT CDS join(136..208,339..608,855..1130,1718..1993,2115..2234, FT 2674..2706,2814..2861,3026..3030) FT /codon_start=1 FT /gene="HLA-C" FT /allele="HLA-C*01:02:11" FT /product="MHC Class I HLA-C*01:02:11 sequence" FT /translation="MRVMAPRTLILLLSGALALTETWACSHSMKYFFTSVSRPGRGEPR FT FISVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRN FT LRGYYNQSEAGSHTLQWMCGCDLGPDGRLLRGYDQYAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAAREAEQRRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQWDGEDQTQDTELVETRPAGDGTFQKWAAVMVPSGEEQRY FT TCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVAGLAVLAVLAVLGAVVAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" FT UTR 1..135 FT exon 136..208 FT /number="1" FT intron 209..338 FT /number="1" FT exon 339..608 FT /number="2" FT intron 609..854 FT /number="2" FT exon 855..1130 FT /number="3" FT intron 1131..1717 FT /number="3" FT exon 1718..1993 FT /number="4" FT intron 1994..2114 FT /number="4" FT exon 2115..2234 FT /number="5" FT intron 2235..2673 FT /number="5" FT exon 2674..2706 FT /number="6" FT intron 2707..2813 FT /number="6" FT exon 2814..2861 FT /number="7" FT intron 2862..3025 FT /number="7" FT exon 3026..3030 FT /number="8" FT UTR 3031..3057 SQ Sequence 3057 BP; 578 A; 888 C; 963 G; 628 T; 0 other; gaatactcat gacgcgtccc caattcccac tcccattggg tgtcgggttc tagagaagcc 60 aatcagcgtc tccgcagtcc cggttctaaa gtccccagtc acccacccgg actcagattc 120 tccccagacg ccgagatgcg ggtcatggcg ccccgaaccc tcatcctgct gctctcggga 180 gccctggccc tgaccgagac ctgggcctgt gagtgcgggg ttgggaggga aacggcctct 240 gcggagagga acgaggtgcc cgcccggcga gggcgcagga cccggggagc cgcgcaggga 300 ggagggtcgg gcgggtctca gcccctcctc gcccccaggc tcccactcca tgaagtattt 360 cttcacatcc gtgtcccggc ctggccgcgg agagccccgc ttcatctcag tgggctacgt 420 ggacgacacg cagttcgtgc ggttcgacag cgacgccgcg agtccgagag gggagccgcg 480 ggcgccgtgg gtggagcagg aggggccgga gtattgggac cgggagacac agaagtacaa 540 gcgccaggca cagactgacc gagtgagcct gcggaacctg cgcggctact acaaccagag 600 cgaggccggt gagtgacccc ggcccggggc gcaggtcacg acccctcctc atcccccacg 660 gacggcccgg gtcgccccaa gtctcccggt ctgagatcca ccccgaggct gcggaacccg 720 cccagaccct cgaccggaga gagccccagt cacctttacc cggtttcatt ttcagtttag 780 gccaaaatcc ccgcgggttg gtcgggactg gggcggggct cgggggacgg ggctgaccac 840 gggggcgggg ccagggtctc acaccctcca gtggatgtgt ggctgcgacc tggggcccga 900 cgggcgcctc ctccgcgggt atgaccagta cgcctacgac ggcaaggatt acatcgccct 960 gaacgaggac ctgcgctcct ggaccgccgc ggacaccgcg gctcagatca cccagcgcaa 1020 gtgggaggcg gcccgtgagg cggagcagcg gagagcctac ctggagggca cgtgcgtgga 1080 gtggctccgc agatacctgg agaacgggaa ggagacgctg cagcgcgcgg gtaccagggg 1140 cagtggggag ccttccccat ctcccgtaga tctcccggca tggcctccca cgaggagggg 1200 aggaaaatgg gatcagcgct agaatatcgc cctcccttga atggagaatg ggatgagttt 1260 tcctgagttt cctctgaggg ccccctctgc tctctaggac aattaaggga tgaagtcctt 1320 gaggaaatgg aggggaagac agtccctgga atactgatca ggggtcccct ttgaccactt 1380 tgaccactgc agcagctgtg gtcaggctgc tgacctttct ctcaggcctt gttctctgcc 1440 tcacgctcaa tgtgtttgaa ggtttgattc cagcttttct gagtccttcg gcctccactc 1500 aggtcaggac cagaagtcgc tgttcctccc tcagagacta gaactttcca atgaatagga 1560 gattatccca ggtgcctgtg tccaggctgg cgtctgggtt ctgtgccccc ttccccaccc 1620 caggtgtcct gtccattctc aggatggtca catgggcgct gttggagtgt cgcaagagag 1680 atacaaagtg tctgaatttt ctgactcttc ccgtcagaac acccaaagac acacgtgacc 1740 caccatcccg tctctgacca tgaggccacc ctgaggtgct gggccctggg cttctaccct 1800 gcggagatca cactgacctg gcagtgggat ggggaggacc aaactcagga caccgagctt 1860 gtggagacca ggccagcagg agatggaacc ttccagaagt gggcagctgt gatggtgcct 1920 tctggagaag agcagagata cacgtgccat gtgcagcacg aggggctgcc ggagcccctc 1980 accctgagat ggggtaagga gggggatgag gggtgatgtg tcttctcagg gaaagcagaa 2040 gtcctggagc ccttcagccg ggtcagggct gaggcttgga ggtcagggcc cctcaccttc 2100 ccctcctttc ccagagccgt cttcccagcc caccatcccc atcgtgggca tcgttgctgg 2160 cctggctgtc ctggctgtcc tagctgtcct aggagctgtg gtggctgttg tgatgtgtag 2220 gaggaagagc tcaggtaggg aaggggtgag gagtggggtc tgggttttct tgttccactg 2280 ggagtttcaa gccccaggta gaagtgtgcc ccacctcgtt actggaagca ccatccacac 2340 atgggccatc ccagcctggg accctgtgtg ccagcactta ctctgttgtg aagcacatga 2400 caatgaagga cagatgtatc accttgatga ttatggtgtt ggggtccttg attccagcat 2460 tcatgagtca ggggaaggtc cctgctaagg acagacctta ggagggcagt tgcttcagaa 2520 cccacagctg ctttccccgt gtttcctgat cctgccctgg gtctgcagtc atagttctgg 2580 aaacttctct tgggtccaag actaggaggt tcccctaaga tcgcatggcc ctgcctcctc 2640 cctgtcccct cacagggcat tttcttccca caggtggaaa aggagggagc tgctctcagg 2700 ctgcatgtaa gtgatggcgg tgggcgtgtg gaggagctca cccaccccat aattcctctt 2760 gtcccacatc tcctgcgggc tctgaccagg tctttttttt tgttctaccc cagccagcaa 2820 cagtgcccag ggctctgatg agtctctcat cgcttgtaaa ggtgagattc tggggagctg 2880 aagtggtcgg gggtggggca gagggaaaag gcctaggtaa tggggatcct ttgattggga 2940 cgtttcgaat gtgtggtgag ctgttcagag tgtcatcact taccatgact gacctgaatt 3000 tgttcatgac tattgtgttc tgtagcctga gacagctgcc tgtgtgggac tgagatg 3057 //