Dbfetch

Dbfetch

ID   HLA05395; SV 1; standard; DNA; HUM; 546 BP.
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AC   HLA05395;
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SV   HLA05395.1
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DT   30-JUN-2010 (Rel. 3.1.0, Created, Version 1)
DT   16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 1)
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DE   HLA-C*08:35, Human MHC Class I sequence (partial)
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KW   Human MHC; HLA; Class I; HLA-C; Allele; HLA-C*08:35;
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OS   Homo Sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates;
OC   Catarrhini; Hominidae; Homo.
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CC   --------------------------------------------------------------------------
CC   IPD-IMGT/HLA Release Version 3.55.0
CC   --------------------------------------------------------------------------
CC   Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative
CC   Commons Attribution-NoDerivs License, see;
CC   http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details.
CC   --------------------------------------------------------------------------
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RN   [1]
RP   1-546
RX   PUBMED; 21995494.
RA   Lazaro AM, Henry J, Ng J, Hurley CK, Posch PE;
RT   "Increased HLA class I and II diversity as 72 novel alleles are identified
RT   in volunteers for the National Marrow Donor Program Registry in 2010.";
RL   Tissue Antigens 79:50-57(2012).
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CC   --------------------------------------------------------------------------
CC   The sequence below is the official allele sequence as approved by the
CC   WHO Nomenclature Committee for Factors of the HLA System.
CC   Any cross references may differ from the sequence shown below.
CC   --------------------------------------------------------------------------
XX
DR   EMBL; HM363053; HM363053.1.
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FH   Key             Location/Qualifiers
FH
FT   source          1..546
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT                   /ethnic="Admixed"
FT                   /cell_line="BY00685"
FT   CDS             join(<1..270,271..546)
FT                   /codon_start=3
FT                   /partial
FT                   /gene="HLA-C"
FT                   /allele="HLA-C*08:35"
FT                   /product="MHC Class I HLA-C*08:35 sequence"
FT                   /translation="SHSMRYFYTAVSRPGRGEPRFIAVGYVDDTQFVQFDSDAASPRGE
FT                   PRAPWVEQEGPEYWDRETQKYKRQAQTDRVSLRNLRGYYNQSEAGSHTLQRMYGCDLGP
FT                   DGRLLRGYNQFAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQRRAYLEGTC
FT                   VEWLRRYLENRKKTLQRA"
FT   exon            1..270
FT                   /number="2"
FT   exon            271..546
FT                   /number="3"
SQ   Sequence 546 BP; 110 A; 170 C; 196 G; 70 T; 0 other;
     gctcccactc catgaggtat ttctacaccg ccgtgtcccg gcccggccgc ggagagcccc        60
     gcttcatcgc agtgggctac gtggacgaca cgcagttcgt gcagttcgac agcgacgccg       120
     cgagtccaag aggggagccg cgggcgccgt gggtggagca ggaggggccg gagtattggg       180
     accgggagac acagaagtac aagcgccagg cacagactga ccgagtgagc ctgcggaacc       240
     tgcgcggcta ctacaaccag agcgaggccg ggtctcacac cctccagagg atgtatggct       300
     gcgacctggg gcccgacggg cgcctcctcc gcgggtataa ccagttcgcc tacgacggca       360
     aggattacat cgccctgaat gaggacctgc gctcctggac cgccgcggac acggcggctc       420
     agatcaccca gcgcaagtgg gaggcggccc gtgaggcgga gcagcggaga gcctacctgg       480
     agggcacgtg cgtggagtgg ctccgcagat acctggagaa caggaagaag acgctgcagc       540
     gcgcgg                                                                  546
//