Dbfetch

Dbfetch

ID   HLA04646; SV 1; standard; DNA; HUM; 546 BP.
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AC   HLA04646;
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SV   HLA04646.1
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DT   21-DEC-2009 (Rel. 2.28.0, Created, Version 1)
DT   16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 1)
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DE   HLA-A*02:171:02, Human MHC Class I sequence (partial)
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KW   Human MHC; HLA; Class I; HLA-A; Allele; HLA-A*02:171:02;
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OS   Homo Sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates;
OC   Catarrhini; Hominidae; Homo.
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CC   --------------------------------------------------------------------------
CC   IPD-IMGT/HLA Release Version 3.55.0
CC   --------------------------------------------------------------------------
CC   Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative
CC   Commons Attribution-NoDerivs License, see;
CC   http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details.
CC   --------------------------------------------------------------------------
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RN   [1]
RP   1-546
RX   PUBMED; 21568944.
RA   Lazaro AM, Xiao Y, Henry J, Ng J, Hurley CK, Posch PE;
RT   "Ninety six novel HLA class I and II alleles identified in volunteers for
RT   the National Marrow Donor Program Registry in 2009.";
RL   Tissue Antigens 78:195-202(2011).
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CC   --------------------------------------------------------------------------
CC   The sequence below is the official allele sequence as approved by the
CC   WHO Nomenclature Committee for Factors of the HLA System.
CC   Any cross references may differ from the sequence shown below.
CC   --------------------------------------------------------------------------
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DR   EMBL; GU256013; GU256013.1.
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FH   Key             Location/Qualifiers
FH
FT   source          1..546
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT                   /ethnic="Asian"
FT                   /cell_line="BY00576"
FT   CDS             join(<1..270,271..546)
FT                   /codon_start=3
FT                   /partial
FT                   /gene="HLA-A"
FT                   /allele="HLA-A*02:171:02"
FT                   /product="MHC Class I HLA-A*02:171:02 sequence"
FT                   /translation="SHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRME
FT                   PRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYGCDVGS
FT                   DWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWETAHEAEQLRAYLEGTC
FT                   VEWLRRYLENGKETLQRT"
FT   exon            1..270
FT                   /number="2"
FT   exon            271..546
FT                   /number="3"
SQ   Sequence 546 BP; 113 A; 161 C; 193 G; 79 T; 0 other;
     gctctcactc catgaggtat ttcttcacat ccgtgtcccg gcccggccgc ggggagcccc        60
     gcttcatcgc agtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg       120
     cgagccagag gatggagccg cgggcgccgt ggatagagca ggagggtccg gagtattggg       180
     acggggagac acggaaagtg aaggcccact cacagactca ccgagtggac ctggggaccc       240
     tgcgcggcta ctacaaccag agcgaggccg gttctcacac cgtccagagg atgtatggct       300
     gcgacgtggg gtcggactgg cgcttcctcc gcgggtacca ccagtacgcc tacgacggca       360
     aggattacat cgccctgaaa gaggacctgc gctcttggac cgcggcggac atggcagctc       420
     agaccaccaa gcacaagtgg gagacggccc atgaggcgga gcagttgaga gcctacctgg       480
     agggcacgtg cgtggagtgg ctccgcagat acctggagaa cgggaaggag acgctgcagc       540
     gcacgg                                                                  546
//