Dbfetch
ID HLA03667; SV 3; standard; DNA; HUM; 3320 BP.
XX
AC HLA03667;
XX
SV HLA03667.3
XX
DT 28-FEB-2009 (Rel. 2.27.0, Created, Version 1)
DT 16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 3)
XX
DE HLA-A*03:48, Human MHC Class I sequence
XX
KW Human MHC; HLA; Class I; HLA-A; Allele; HLA-A*03:48;
XX
OS Homo Sapiens (human)
OC Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates;
OC Catarrhini; Hominidae; Homo.
XX
CC --------------------------------------------------------------------------
CC IPD-IMGT/HLA Release Version 3.55.0
CC --------------------------------------------------------------------------
CC Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative
CC Commons Attribution-NoDerivs License, see;
CC http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details.
CC --------------------------------------------------------------------------
XX
RN [1]
RP 1-3320
RX PUBMED; 24571476.
RA Hernandez-Frederick CJ, Giani AS, Cereb N, Silva-Gozalez R, Pingel J,
RA Schmidt AH, Ehninger G, Yang SY;
RT "Identification of 2127 new HLA class I alleles in potential stem cell
RT donors from Germany, the United States and Poland.";
RL Tissue Antigens 83:184-189(2014).
XX
RN [2]
RP 1-3320
RX PUBMED; 30117314.
RA Lazaro A, Hou L, Tu B, Masaberg C, Enriquez E, Gerfen J, Kariyawasam K,
RA Persaud M, Qin X, Simbulan D, Xiao Y, Xun L, Yang R, Ng J, Hurley CK;
RT "Full gene HLA class I sequences of 79 novel and 519 mostly uncommon
RT alleles from a large United States registry population.";
RL HLA 92:304-309(2018).
XX
CC --------------------------------------------------------------------------
CC The sequence below is the official allele sequence as approved by the
CC WHO Nomenclature Committee for Factors of the HLA System.
CC Any cross references may differ from the sequence shown below.
CC --------------------------------------------------------------------------
XX
DR EMBL; FJ358629; FJ358629.1.
DR EMBL; FJ875685; FJ875685.1.
DR EMBL; FJ976753; FJ976753.1.
DR EMBL; GQ161002; GQ161002.1.
DR EMBL; GQ180293; GQ180293.1.
DR EMBL; GQ180341; GQ180341.1.
DR EMBL; GQ199668; GQ199668.1.
DR EMBL; GQ240369; GQ240369.1.
DR EMBL; GQ401183; GQ401183.1.
DR EMBL; HM159302; HM159302.1.
DR EMBL; JN123765; JN123765.1.
DR EMBL; LK021974; LK021974.1.
DR EMBL; MF474188; MF474188.1.
XX
FH Key Location/Qualifiers
FH
FT source 1..3320
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT /ethnic="European, Undefined"
FT /cell_line="DKMS-LSL-A-156"
FT /cell_line="HG00001228"
FT /cell_line="HG00002349"
FT /cell_line="HN-21690-2"
FT /cell_line="HN-32993-0"
FT /cell_line="HN-40332-1"
FT /cell_line="HN-40494-9"
FT /cell_line="HN-43969-2"
FT /cell_line="HN-52782-1"
FT /cell_line="HN-65267-9"
FT /cell_line="HN-8052339"
FT /cell_line="HN-87054-5"
FT /cell_line="NT01465"
FT CDS join(119..191,322..591,833..1108,1687..1962,2065..2181,
FT 2624..2656,2799..2846,3016..3020)
FT /codon_start=1
FT /gene="HLA-A"
FT /allele="HLA-A*03:48"
FT /product="MHC Class I HLA-A*03:48 sequence"
FT /translation="MAVMAPRTLLLLLSGALALTQTWAGSHSMRYFFTSVSRPGRGEPR
FT FIAVGSVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGT
FT LRGYYNQSEAGSHTIQIMYGCDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMA
FT AQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHE
FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLPKPLTLRWELSSQPTIPIVGIIAGLVLLGAVITGAVVAAVMWRRKSSDRK
FT GGSYTQAASSDSAQGSDVSLTACKV"
FT UTR 1..118
FT exon 119..191
FT /number="1"
FT intron 192..321
FT /number="1"
FT exon 322..591
FT /number="2"
FT intron 592..832
FT /number="2"
FT exon 833..1108
FT /number="3"
FT intron 1109..1686
FT /number="3"
FT exon 1687..1962
FT /number="4"
FT intron 1963..2064
FT /number="4"
FT exon 2065..2181
FT /number="5"
FT intron 2182..2623
FT /number="5"
FT exon 2624..2656
FT /number="6"
FT intron 2657..2798
FT /number="6"
FT exon 2799..2846
FT /number="7"
FT intron 2847..3015
FT /number="7"
FT exon 3016..3020
FT /number="8"
FT UTR 3021..3320
SQ Sequence 3320 BP; 633 A; 957 C; 1013 G; 717 T; 0 other;
ccagttctca ctcccattgg gtgtcgggtt tccagagaag ccaatcagtg tcgtcgcggt 60
cgctgttcta aagcccgcac gcacccaccg ggactcagat tctccccaga cgccgaggat 120
ggccgtcatg gcgccccgaa ccctcctcct gctactctcg ggggccctgg ccctgaccca 180
gacctgggcg ggtgagtgcg gggtcgggag ggaaaccgcc tctgcgggga gaagcaaggg 240
gccctcctgg cgggggcgca ggaccggggg agccgcgccg ggacgagggt cgggcaggtc 300
tcagccactg ctcgccccca ggctcccact ccatgaggta tttcttcaca tccgtgtccc 360
ggcccggccg cggggagccc cgcttcatcg ccgtgggctc cgtggacgac acgcagttcg 420
tgcggttcga cagcgacgcc gcgagccaga ggatggagcc gcgggcgccg tggatagagc 480
aggaggggcc ggagtattgg gaccaggaga cacggaatgt gaaggcccag tcacagactg 540
accgagtgga cctggggacc ctgcgcggct actacaacca gagcgaggcc ggtgagtgac 600
cccggccggg ggcgcaggtc aggacccctc atcccccacg gacgggccag gtcgcccaca 660
gtctccgggt ccgagatcca ccccgaagcc gcgggacccc gagacccttg ccccgggaga 720
ggcccaggcg cctttacccg gtttcatttt cagtttaggc caaaaatccc cccgggttgg 780
tcggggctgg gcggggctcg ggggactggg ctgaccgcgg ggtcggggcc aggttctcac 840
accatccaga taatgtatgg ctgcgacgtg gggtcggacg ggcgcttcct ccgcgggtac 900
cggcaggacg cctacgacgg caaggattac atcgccctga acgaggacct gcgctcttgg 960
accgcggcgg acatggcggc tcagatcacc aagcgcaagt gggaggcggc ccatgaggcg 1020
gagcagttga gagcctacct ggatggcacg tgcgtggagt ggctccgcag atacctggag 1080
aacgggaagg agacgctgca gcgcacgggt accaggggcc acggggcgcc tccctgatcg 1140
cctgtagatc tcccgggctg gcctcccaca aggaggggag acaattggga ccaacactag 1200
aatatcaccc tccctctggt cctgagggag aggaatcctc ctgggttcca gatcctgtac 1260
cagagagtga ctctgaggtt ccgccctgct ctctgacaca attaagggat aaaatctctg 1320
aaggagtgac gggaagacga tccctcgaat actgatgagt ggttcccttt gacaccggca 1380
gcagccttgg gcccgtgact tttcctctca ggccttgttc tctgcttcac actcaatgtg 1440
tgtgggggtc tgagtccagc acttctgagt ccctcagcct ccactcaggt caggaccaga 1500
agtcgctgtt cccttctcag ggaatagaag attatcccag gtgcctgtgt ccaggctggt 1560
gtctgggttc tgtgctctct tccccatccc gggtgtcctg tccattctca agatggccac 1620
atgcgtgctg gtggagtgtc ccatgacaga tgcaaaatgc ctgaattttc tgactcttcc 1680
cgtcagaccc ccccaagaca catatgaccc accaccccat ctctgaccat gaggccaccc 1740
tgaggtgctg ggccctgggc ttctaccctg cggagatcac actgacctgg cagcgggatg 1800
gggaggacca gacccaggac acggagctcg tggagaccag gcctgcaggg gatggaacct 1860
tccagaagtg ggcggctgtg gtggtgcctt ctggagagga gcagagatac acctgccatg 1920
tgcagcatga gggtctgccc aagcccctca ccctgagatg gggtaaggag ggagatgggg 1980
gtgtcatgtc tcttagggaa agcaggagcc tctctggaga cctttagcag ggtcagggcc 2040
cctcaccttc ccctcttttc ccagagctgt cttcccagcc caccatcccc atcgtgggca 2100
tcattgctgg cctggttctc cttggagctg tgatcactgg agctgtggtc gctgccgtga 2160
tgtggaggag gaagagctca ggtggagaag gggtgaaggg tggggtctga gatttcttgt 2220
ctcactgagg gttccaagcc ccagctagaa atgtgccctg tctcattact gggaagcacc 2280
gtccacaatc atgggcctac ccagtctggg ccctgtgtgc cagcacttac tcttttgtaa 2340
agcacctgtt aaaatgaagg acagatttat caccttgatt acggcggtga tgggacctga 2400
tcccagcagt cacaagtcac aggggaaggt ccctgaggac agacctcagg agggctattg 2460
gtccaggacc cacacctgct ttcttcatgt ttcctgatcc cgccctgggt ctgcagtcac 2520
acatttctgg aaacttctct ggggtccaag actaggaggt tcctctagga ccttaaggcc 2580
ctggctcctt tctggtatct cacaggacat tttcttctca cagatagaaa aggagggagt 2640
tacactcagg ctgcaagtaa gtatgaagga ggctgatgcc tgaggtcctt gggatattgt 2700
gtttgggagc ccatggggga gcccacccac ctcacaattc ctcctctagc cacatcttct 2760
gtgggatctg accaggttct gtttttgttc taccccaggc agtgacagtg cccagggctc 2820
tgatgtgtcc ctcacagctt gtaaaggtga gagcttggag gacctaatgt gtgttgggtg 2880
ttgggcggaa cagtggacac agctgtgcta tggggtttct ttgcattgga tgtattgagc 2940
atgcgatggg ctgtttaagg tgtgacccct cactgtgatg gatatgaatt tgttcatgaa 3000
tatttttttc tatagtgtga gacagctgcc ttgtgtggga ctgagaggca agagttgttc 3060
ctgcccttcc ctttgtgact tgaagaaccc tgactttgtt tctgcaaagg cacctgcatg 3120
tgtctgtgtt cgtgtaggca taatgtgagg aggtggggag accaccccac ccccatgtcc 3180
accatgaccc tcttcccacg ctgacctgtg ctccctcccc aatcatcttt cctgttccag 3240
agaggtgggg ctgaggtgtc tccatctctg tctcaacttc atggtgcact gagctgtaac 3300
ttcttccttc cctattaaaa 3320
//