Dbfetch

Dbfetch

ID   HLA03575; SV 2; standard; DNA; HUM; 546 BP.
XX
AC   HLA03575;
XX
SV   HLA03575.2
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DT   22-DEC-2008 (Rel. 2.24.0, Created, Version 1)
DT   16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 2)
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DE   HLA-DPB1*121:01, Human MHC Class II sequence (partial)
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KW   Human MHC; HLA; Class II; HLA-DPB1; Allele; HLA-DPB1*121:01;
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OS   Homo Sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates;
OC   Catarrhini; Hominidae; Homo.
XX
CC   --------------------------------------------------------------------------
CC   IPD-IMGT/HLA Release Version 3.55.0
CC   --------------------------------------------------------------------------
CC   Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative
CC   Commons Attribution-NoDerivs License, see;
CC   http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details.
CC   --------------------------------------------------------------------------
XX
RN   [1]
RP   1-546
RX   PUBMED; 19775376.
RA   Witter K, Kirchner E, Borelli C, Messer G, Albert T, Zahn R, Kauke T;
RT   "In a study for acne vulgaris, sequence-based HLA typing revealed a novel
RT   DPB1 allele, DPB1*2402.";
RL   Tissue Antigens 74:354-356(2009).
XX
CC   --------------------------------------------------------------------------
CC   The sequence below is the official allele sequence as approved by the
CC   WHO Nomenclature Committee for Factors of the HLA System.
CC   Any cross references may differ from the sequence shown below.
CC   --------------------------------------------------------------------------
XX
DR   EMBL; FM883600; FM883600.2.
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FH   Key             Location/Qualifiers
FH
FT   source          1..546
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT                   /ethnic="European"
FT                   /cell_line="191849"
FT   CDS             join(<1..264,265..546)
FT                   /codon_start=3
FT                   /partial
FT                   /gene="HLA-DPB1"
FT                   /allele="HLA-DPB1*121:01"
FT                   /product="MHC Class II HLA-DPB1*121:01 sequence"
FT                   /translation="NYLFQGRQECYAFNGTQRFLERYIYNREEFARFYSDVGEFRAVTE
FT                   LGRPAAEYWNSQKDILEEKRAVPDRMCRHNYELGGPMTLQRRVQPRVNVSPSKKGPLQH
FT                   HNLLVCHVTDFYPGSIQVRWFLNGQEETAGVVSTNLIRNGDWTFQILVMLEMTPQQGDV
FT                   YTCQVEHTSLDSPVTVEW"
FT   exon            1..264
FT                   /number="2"
FT   exon            265..546
FT                   /number="3"
SQ   Sequence 546 BP; 125 A; 149 C; 174 G; 98 T; 0 other;
     agaattacct tttccaggga cggcaggaat gctacgcgtt taatgggaca cagcgcttcc        60
     tggagagata catctacaac cgggaggagt tcgcgcgctt ctacagcgac gtgggggagt       120
     tccgggcggt gacggagctg gggcggcctg ctgcggagta ctggaacagc cagaaggaca       180
     tcctggagga gaagcgggca gtgccggaca ggatgtgcag acacaactac gagctgggcg       240
     ggcccatgac cctgcagcgc cgagtccagc ctagggtgaa tgtttccccc tccaagaagg       300
     ggcccttgca gcaccacaac ctgcttgtct gccacgtgac ggatttctac ccaggcagca       360
     ttcaagtccg atggttcctg aatggacagg aggaaacagc tggggtcgtg tccaccaacc       420
     tgatccgtaa tggagactgg accttccaga tcctggtgat gctggaaatg accccccagc       480
     agggagatgt ctacacctgc caagtggagc acaccagcct ggatagtcct gtcaccgtgg       540
     agtgga                                                                  546
//