Dbfetch

Dbfetch

ID   HLA03479; SV 1; standard; DNA; HUM; 546 BP.
XX
AC   HLA03479;
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SV   HLA03479.1
XX
DT   24-AUG-2008 (Rel. 2.23.0, Created, Version 1)
DT   16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 1)
XX
DE   HLA-B*13:23, Human MHC Class I sequence (partial)
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KW   Human MHC; HLA; Class I; HLA-B; Allele; HLA-B*13:23;
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OS   Homo Sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates;
OC   Catarrhini; Hominidae; Homo.
XX
CC   --------------------------------------------------------------------------
CC   IPD-IMGT/HLA Release Version 3.55.0
CC   --------------------------------------------------------------------------
CC   Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative
CC   Commons Attribution-NoDerivs License, see;
CC   http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details.
CC   --------------------------------------------------------------------------
XX
RN   [1]
RP   1-546
RX   PUBMED; 23216290.
RA   Zhiyin G, Zhang Z, Shan XY, Wang L, Liu N;
RT   "Identification of a new HLA-B*13 allele, HLA-B*13:23, which differs from
RT   the HLA-B*13:01:01 allele by a single nucleotide deletion in exon 2.";
RL   Tissue Antigens 81:53-54(2013).
XX
CC   --------------------------------------------------------------------------
CC   The sequence below is the official allele sequence as approved by the
CC   WHO Nomenclature Committee for Factors of the HLA System.
CC   Any cross references may differ from the sequence shown below.
CC   --------------------------------------------------------------------------
XX
DR   EMBL; EU884291; EU884291.1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..546
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT                   /ethnic="Asian"
FT                   /cell_line="BJ067050"
FT   CDS             join(<1..270,271..546)
FT                   /codon_start=3
FT                   /partial
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*13:23"
FT                   /product="MHC Class I HLA-B*13:23 sequence"
FT                   /translation="SHSMRYFHTAMSRPGRGEPRFITVGYVDDTQFVRFDSDATSPRMA
FT                   PRAPWIEQEGPEYWDRETQISKTNTQTYRENLRTALRYYNQSEAGSHIIQRMYGCDLGP
FT                   DGRLLRGHNQLAYDGKDYIALNEDLSSWTAADTAAQITQLKWEAARVAEQLRAYLEGEC
FT                   VEWLRRYLENGKETLQRA"
FT   exon            1..270
FT                   /number="2"
FT   exon            271..546
FT                   /number="3"
SQ   Sequence 546 BP; 114 A; 175 C; 184 G; 73 T; 0 other;
     gctcccactc catgaggtat ttccacaccg ccatgtcccg gcccggccgc ggggagcccc        60
     gcttcatcac cgtgggctac gtggacgaca cccagttcgt gaggttcgac agcgacgcca       120
     cgagtccgag gatggcgccc cgggcgccat ggatagagca ggaggggccg gagtattggg       180
     accgggagac acagatctcc aagaccaaca cacagactta ccgagagaac ctgcgcaccg       240
     cgctccgcta ctacaaccag agcgaggccg ggtctcacat catccagagg atgtatggct       300
     gcgacctggg gccggacggg cgcctcctcc gcgggcataa ccagttagcc tacgacggca       360
     aggattacat cgccctgaac gaggacctga gctcctggac cgcggcggac accgcggctc       420
     agatcaccca gctcaagtgg gaggcggccc gtgtggcgga gcagctgaga gcctacctgg       480
     agggcgagtg cgtggagtgg ctccgcagat acctggagaa cgggaaggag acgctgcagc       540
     gcgcgg                                                                  546
//