Dbfetch

ID   HLA03262; SV 2; standard; DNA; HUM; 3858 BP.
XX
AC   HLA03262;
XX
SV   HLA03262.2
XX
DT   26-MAR-2008 (Rel. 2.21.0, Created, Version 1)
DT   16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 2)
XX
DE   HLA-B*35:68:02, Human MHC Class I sequence
XX
KW   Human MHC; HLA; Class I; HLA-B; Allele; HLA-B*35:68:02;
XX
OS   Homo Sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates;
OC   Catarrhini; Hominidae; Homo.
XX
CC   --------------------------------------------------------------------------
CC   IPD-IMGT/HLA Release Version 3.55.0
CC   --------------------------------------------------------------------------
CC   Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative
CC   Commons Attribution-NoDerivs License, see;
CC   http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details.
CC   --------------------------------------------------------------------------
XX
RN   [1]
RP   1-3858
RX   PUBMED; 19317748.
RA   Lazaro AM, Xiao Y, Regenscheid A, Ng J, Hurley CK, Posch PE;
RT   "Characterization of 104 novel alleles at the HLA-A, -B and -DRB1 loci from
RT   the National Marrow Donor Program volunteer donors.";
RL   Tissue Antigens 73:364-372(2009).
XX
RN   [2]
RP   1-3858
RX   PUBMED; 30117314.
RA   Lazaro A, Hou L, Tu B, Masaberg C, Enriquez E, Gerfen J, Kariyawasam K,
RA   Persaud M, Qin X, Simbulan D, Xiao Y, Xun L, Yang R, Ng J, Hurley CK;
RT   "Full gene HLA class I sequences of 79 novel and 519 mostly uncommon
RT   alleles from a large United States registry population.";
RL   HLA 92:304-309(2018).
XX
CC   --------------------------------------------------------------------------
CC   The sequence below is the official allele sequence as approved by the
CC   WHO Nomenclature Committee for Factors of the HLA System.
CC   Any cross references may differ from the sequence shown below.
CC   --------------------------------------------------------------------------
XX
DR   EMBL; EU522470; EU522470.1.
DR   EMBL; EU555322; EU555322.1.
DR   EMBL; EU557367; EU557367.1.
DR   EMBL; FJ594550; FJ594550.1.
DR   EMBL; FJ594618; FJ594618.1.
DR   EMBL; MG680148; MG680148.1.
DR   EMBL; MN816891; MN816891.1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..3858
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT                   /ethnic="Admixed, Hispanic or Latin American, Undefined"
FT                   /cell_line="BY00280"
FT                   /cell_line="BY00295"
FT                   /cell_line="BY00296"
FT                   /cell_line="BY02106"
FT                   /cell_line="HN-3734675"
FT                   /cell_line="HN-6050321"
FT                   /cell_line="NT01871"
FT   CDS             join(285..357,487..756,1002..1277,1853..2128,2233..2349,
FT                   2791..2823,2930..2973)
FT                   /codon_start=1
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*35:68:02"
FT                   /product="MHC Class I HLA-B*35:68:02 sequence"
FT                   /translation="MRVTAPRTVLLLLWGAVALTETWAGSHSMRYFYTAMSRPGRGEPR
FT                   FIAVGYVDDTQFVRFDSDAASPRTEPRAPWIEQEGPEYWDRNTQIFKTNTQTYRESLRN
FT                   LRGYYNQSEAGSHTLQRMYGCDLGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTA
FT                   AQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPVSDHE
FT                   ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY
FT                   TCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRRKSSGGK
FT                   GGSYSQAASSDSAQGSDVSLTA"
FT   UTR             1..284
FT   exon            285..357
FT                   /number="1"
FT   intron          358..486
FT                   /number="1"
FT   exon            487..756
FT                   /number="2"
FT   intron          757..1001
FT                   /number="2"
FT   exon            1002..1277
FT                   /number="3"
FT   intron          1278..1852
FT                   /number="3"
FT   exon            1853..2128
FT                   /number="4"
FT   intron          2129..2232
FT                   /number="4"
FT   exon            2233..2349
FT                   /number="5"
FT   intron          2350..2790
FT                   /number="5"
FT   exon            2791..2823
FT                   /number="6"
FT   intron          2824..2929
FT                   /number="6"
FT   exon            2930..2973
FT                   /number="7"
FT   UTR             2974..3858
SQ   Sequence 3858 BP; 730 A; 1101 C; 1178 G; 849 T; 0 other;
     gatcaggacg aagtcccagg ccccgggcgg ggctctcagg gtctcaggct ccgagagcct        60
     tgtctgcatt ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc       120
     tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc       180
     ccattgggtg tcggatatct agagaagcca atcagtgtcg ccggggtccc agttctaaag       240
     tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcgc       300
     cccgaaccgt cctcctgctg ctctgggggg cagtggccct gaccgagacc tgggccggtg       360
     agtgcggggt cgggagggaa atggcctctg tggggaggag cgaggggacc gcaggcgggg       420
     gcgcaggacc tgaggagccg cgccgggagg agggtcgggc gggtctcagc ccctcctcgc       480
     ccccaggctc ccactccatg aggtatttct acaccgccat gtcccggccc ggccgcgggg       540
     agccccgctt catcgcagtg ggctacgtgg acgacaccca gttcgtgagg ttcgacagcg       600
     acgccgcgag tccgaggacg gagccccggg cgccatggat agagcaggag gggccggagt       660
     attgggaccg gaacacacag atcttcaaga ccaacacaca gacttaccga gagagcctgc       720
     ggaacctgcg cggctactac aaccagagcg aggccggtga gtgaccccgg cccggggcgc       780
     aggtcacgac tccccatccc ccacgtacgg cccgggtcgc cccgagtctc cgggtccgag       840
     atccgcctcc ctgaggccgc gggacccgcc cagaccctcg accggcgaga gccccaggcg       900
     cgtttacccg gtttcatttt cagttgaggc caaaatcccc gcgggttggt cggggcgggg       960
     cggggctcgg gggacggggc tgaccgcggg gcctgggcca gggtctcaca ccctccagag      1020
     gatgtacggc tgcgacctgg ggcccgacgg gcgcctcctc cgcgggcatg accagtccgc      1080
     ctacgacggc aaggattaca tcgccctgaa cgaggacctg agctcctgga ccgcggcgga      1140
     caccgcggct cagatcaccc agcgcaagtg ggaggcggcc cgtgtggcgg agcagctgag      1200
     agcctacctg gagggcctgt gcgtggagtg gctccgcaga tacctggaga acgggaagga      1260
     gacgctgcag cgcgcgggta ccaggggcag tggggagcct tccccatctc ctataggtcg      1320
     ccggggatgg cctcccacga gaagaggagg aaaatgggat cagcgctaga atgtcgccct      1380
     cccttgaatg gagaatggca tgagttttcc tgagtttcct ctgagggccc cctcttctct      1440
     ctaggacaat taagggatga cgtctctgag gaaatggagg ggaagacagt ccctagaata      1500
     ctgatcaggg gtcccctttg acccctgcag cagccttggg aaccgtgact tttcctctca      1560
     ggccttgttc tctgcctcac actcagtgtg tttggggctc tgattccagc acttctgagt      1620
     cactttacct ccactcagat caggagcaga agtccctgtt ccccgctcag agactcgaac      1680
     tttccaatga ataggagatt atcccaggtg cctgcgtcca ggctggtgtc tgggttctgt      1740
     gccccttccc cacaccaggt gtcctgtcca ttctcaggct ggtcacatgg gtggtcctag      1800
     ggtgtcccat gagagatgca aagcgcctga attttctgac tcttcccatc agacccccca      1860
     aagacacacg tgacccacca ccccgtctct gaccatgagg ccaccctgag gtgctgggcc      1920
     ctgggcttct accctgcgga gatcacactg acctggcagc gggatggcga ggaccaaact      1980
     caggacactg agcttgtgga gaccagacca gcaggagata gaaccttcca gaagtgggca      2040
     gctgtggtgg tgccttctgg agaagagcag agatacacat gccatgtaca gcatgagggg      2100
     ctgccgaagc ccctcaccct gagatggggt aaggaggggg atgaggggtc atatctcttc      2160
     tcagggaaag caggagccct tctggagccc ttcagcaggg tcagggcccc tcgtcttccc      2220
     ctcctttccc agagccatct tcccagtcca ccatccccat cgtgggcatt gttgctggcc      2280
     tggctgtcct agcagttgtg gtcatcggag ctgtggtcgc tactgtgatg tgtaggagga      2340
     agagctcagg tagggaaggg gtgaggggtg gggtctgggt tttcttgtcc cactgggggt      2400
     ttcaagcccc aggtagaagt gttccctgcc tcattactgg gaagcagcat ccacacaggg      2460
     gctaacgcag cctgggaccc tgtgtgccag cacttactct tttgtgcagc acatgtgaca      2520
     atgaaggacg gatgtatcac cttgatggtt gtggtgttgg ggtcctgatt tcagcattca      2580
     tgagtcaggg gaaggtccct gctaaggaca gaccttagga gggcagttgg tccaggaccc      2640
     acacttgctt tcctcgtgtt tcctgatcct gccttgggtc tgtagtcata cttctggaaa      2700
     ttccttttgg gtccaagacg aggaggttcc tctaagatct catggccctg cttcctccca      2760
     gtcccctcac aggacatttt cttcccacag gtggaaaagg agggagctac tctcaggctg      2820
     cgtgtaagtg gtgggggtgg gagtgtggag gagctcaccc accccataat tcctcctgtc      2880
     ccacgtctcc tgcgggctct gaccaggtcc tgtttttgtt ctactccagc cagcgacagt      2940
     gcccagggct ctgatgtgtc tctcacagct tgaaaaggtg agattcttgg ggtctagagt      3000
     gggcgggggg ggcggggagg gggcagaggg gaaaggcctg ggtaatggag attctttgat      3060
     tgggatgttt cgcgtgtgtc gtgggctgtt cagagtgtca tcacttacca tgactaacca      3120
     gaatttgttc atgactgttg ttttctgtag cctgagacag ctgtcttgtg agggactgag      3180
     atgcaggatt tcttcactcc tcccctttgt gacttcaaga gcctctggca tctctttctg      3240
     caaaggcacc tgaatgtgtc tgcgtccctg ttagcctaat gtgaggaggt ggagagacag      3300
     cccacccccg tgtccactgt gacccctgtt cccatgctga cctgtgtttc ctccccagtc      3360
     atctttcttg ttccagagag gtggggctgg atgtctccat ctctgtctca actttatgtg      3420
     cactgagctg caacttctta cttccctact gaaaataaga atctgaatat acatttgttt      3480
     tctcaaatat ttgctatgag aggttgatgg attaattaaa taagtcaatt cctggaatgt      3540
     gagagagcaa ataaagacct gagaaccttc cagaatctgc atgttcgctg tgctgagtct      3600
     attgcaggtg gggtgtggag aaggctgtgg ggggccgagt gtggacaggg cctgtgccca      3660
     gttgttgttg agcccatcat gggctttatg tggttagtcc tcagctgggt caccttcact      3720
     gccccattgt ccttgtccct tcagcggaaa cttgtccagt gggagctgtg accacagagg      3780
     ctcacacatc gcccagggtg gcccctgcac acgggggtct ctgtgcattc tgagacaaat      3840
     tttcagagcc attcacct                                                    3858
//