Dbfetch
ID HLA02888; SV 2; standard; DNA; HUM; 3868 BP. XX AC HLA02888; XX SV HLA02888.2 XX DT 28-MAR-2007 (Rel. 2.17.0, Created, Version 1) DT 16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 2) XX DE HLA-B*57:12, Human MHC Class I sequence XX KW Human MHC; HLA; Class I; HLA-B; Allele; HLA-B*57:12; XX OS Homo Sapiens (human) OC Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates; OC Catarrhini; Hominidae; Homo. XX CC -------------------------------------------------------------------------- CC IPD-IMGT/HLA Release Version 3.55.0 CC -------------------------------------------------------------------------- CC Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative CC Commons Attribution-NoDerivs License, see; CC http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details. CC -------------------------------------------------------------------------- XX RN [1] RP 1-3868 RX PUBMED; 19523144. RA Lazaro AM, Xiao Y, Masaberg C, Nichol L, Ivaskova E, Banwart R, Field E, Ng RA J, Hurley CK, Posch PE; RT "Description of novel class I alleles encountered during routine registry RT in 2007."; RL Tissue Antigens 74:238-240(2009). XX CC -------------------------------------------------------------------------- CC The sequence below is the official allele sequence as approved by the CC WHO Nomenclature Committee for Factors of the HLA System. CC Any cross references may differ from the sequence shown below. CC -------------------------------------------------------------------------- XX DR EMBL; EF484938; EF484938.1. DR EMBL; MN901518; MN901518.1. XX FH Key Location/Qualifiers FH FT source 1..3868 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT /ethnic="Undefined" FT /cell_line="BY00149" FT /cell_line="BY02132" FT CDS join(285..357,486..755,1002..1277,1853..2128,2233..2349, FT 2791..2823,2930..2973) FT /codon_start=1 FT /gene="HLA-B" FT /allele="HLA-B*57:12" FT /product="MHC Class I HLA-B*57:12 sequence" FT /translation="MRVTAPRTVLLLLWGAVALTETWAGSHSMRYFYTAMSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYWDGETRNMKASAQTYRESLRN FT LRGYYNQSEAGSHIIQVMYGCDVGPDGRLLRGHNQYAYDGKDYIALNEDLSSWTAADTA FT AQITQRKWEAARVAEQRRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK FT GGSYSQAACSDSAQGSDVSLTA" FT UTR 1..284 FT exon 285..357 FT /number="1" FT intron 358..485 FT /number="1" FT exon 486..755 FT /number="2" FT intron 756..1001 FT /number="2" FT exon 1002..1277 FT /number="3" FT intron 1278..1852 FT /number="3" FT exon 1853..2128 FT /number="4" FT intron 2129..2232 FT /number="4" FT exon 2233..2349 FT /number="5" FT intron 2350..2790 FT /number="5" FT exon 2791..2823 FT /number="6" FT intron 2824..2929 FT /number="6" FT exon 2930..2973 FT /number="7" FT UTR 2974..3868 SQ Sequence 3868 BP; 724 A; 1095 C; 1194 G; 855 T; 0 other; gatcaggacg aagtcccagg tcccggacgg ggctctcagg gtctcaggct ccgagagcct 60 tgtctgcatt ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120 tcccaacctg tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcgggtgtct agagaagcca atcagcgtcg ccgcggtccc agttctaaag 240 tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcac 300 cccgaaccgt cctcctgctg ctctgggggg cagtggccct gaccgagacc tgggccggtg 360 agtgcgggtc ggcagggaaa tggcctctgt agggaggagc aaggggaccg caggcggggg 420 cgcaggaccc ggggagccgc gccgggagga gggtcgggcg ggtctcagcc cctcctcgcc 480 cccaggctcc cactccatga ggtatttcta caccgccatg tcccggcccg gccgcgggga 540 gccccgcttc atcgcagtgg gctacgtgga cgacacccag ttcgtgaggt tcgacagcga 600 cgccgcgagt ccgaggatgg cgccccgggc gccatggata gagcaggagg ggccggagta 660 ttgggacggg gagacacgga acatgaaggc ctccgcgcag acttaccgag agagcctgcg 720 gaacctgcgc ggctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca 780 ggtcacgact ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga 840 tccacccccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc 900 gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc agggcggggc 960 ggggctcggg gggacggggc tgaccgcggg gccggggcca gggtctcaca tcatccaggt 1020 gatgtatggc tgcgacgtgg ggccggacgg gcgcctcctc cgcgggcata accagtacgc 1080 ctacgacggc aaggattaca tcgccctgaa cgaggacctg agctcctgga ccgcggcgga 1140 cacggcggct cagatcaccc agcgcaagtg ggaggcggcc cgtgtggcgg agcagcggag 1200 agcctacctg gagggcctgt gcgtggagtg gctccgcaga tacctggaga acgggaagga 1260 gacgctgcag cgcgcgggta ccaggggcag tggggagcct tccccatctc ctataggtcg 1320 ccggggatgg cctcccacga gaagaggagg aaaatgggat cagcgctaga atgtcgccct 1380 cccttgaatg gagaatggca tgagttttcc tgagtttcct ctgagggccc cctcttctct 1440 ctaggacaat taagggatga cgtctctgag gaaatggagg ggaagacagt ccctagaata 1500 ctgatcaggg gtcccctttg acccctgcag cagccttggg aaccgtgact tttcctctca 1560 ggccttgttc tctgcctcac actcagtgtg tttggggctc tgattccagc acttctgagt 1620 cactttacct ccactcagat caggagcaga agtccctgtt ccccgctcag agactcgaac 1680 tttccaatga ataggagatt atcccaggtg cctgcgtcca ggctggtgtc tgggttctgt 1740 gccccttccc caccccaggt gtcctgccca ttctcaggct ggtcacatgg gtggtcctag 1800 ggtgtcccat gagagatgca aagcgcctga attttctgac tcttcccatc agacccccca 1860 aagacacatg tgacccacca ccccatctct gaccatgagg ccaccctgag gtgctgggcc 1920 ctgggcttct accctgcgga gatcacactg acctggcagc gggatggcga ggaccaaact 1980 caggacaccg agcttgtgga gaccagacca gcaggagata gaaccttcca gaagtgggca 2040 gctgtggtgg tgccttctgg agaagagcag agatacacat gccatgtaca gcatgagggg 2100 ctgccaaagc ccctcaccct gagatggggt aaggaggggg atgaggggtc atatctcttc 2160 tcagggaaag caggagccct tctggagccc ttcagcaggg tcagggcccc tcatcttccc 2220 ctcctttccc agagccatct tcccaatcca ccgtccccat cgtgggcatt gttgctggcc 2280 tggctgtcct agcagttgtg gtcatcggag ctgtggtcgc tgctgtgatg tgtaggagga 2340 agagctcagg tagggaaggg gtgaggggtg gggtctgggt tttcttgtcc cactgggggt 2400 ttcaagcccc aggtagaagt gttccctgcc tcattactgg gaagcagcat gcacacaggg 2460 gctaacgcag cctgggaccc tgtgtgccag cacttactct tttgtgcagc acatgtgaca 2520 atgaaggacg gatgtatcac cttgatggtt gtggtgttgg ggtcctgatt ccagcattca 2580 tgagtcaggg gaaggtccct gctaaggaca gaccttagga gagcagttgg tccaggaccc 2640 acacttgctt tcctcgtgtt tcctgatcct gccctgggtc tgtagtcata cttctggaaa 2700 ttccttttgg gtccaagacg aggaggttcc tctaagatct catggccctg cttcctccca 2760 gtcccctcac aggacatttt cttcccacag gtggaaaagg agggagctac tctcaggctg 2820 cgtgtaagtg gtgggggtgg gagtgtggag gagctcaccc accccataat tcctcctgtc 2880 ccacgtctcc tgcgggctct gaccaggtcc tgtttttgtt ctactccagg cagcgacagt 2940 gcccagggct ctgatgtgtc tctcacagct tgaaaaggtg agattcttgg ggtctagagt 3000 gggtgggggt ggcgggtctg gggcggggtg gggcagaggg gaaaggcctg ggtaatggag 3060 attctttgat tgggatgttt cgcgtgtgtg gtgggctgtt cagagtgtca tcacttacca 3120 tgactcacca gaatttgttc atgactgttg ttttctgtag cctgagacag ctgtcttgtg 3180 agggactgag atgcaggatt tcttcacgcc tcccctttgt gacttcaaga gcctctggca 3240 tctctttctg caaaggcacc tgaatgtgtc tgcgtccctg ttagcctaat gtgaggaggt 3300 ggagagacag cccaaccttg tgtccactgt gacccctgtt cccatgctga cctgtgtttc 3360 ctccccagtc atctttcttg ttccagagag gtggggctgg atgtctccat ctctgtctca 3420 actttatgtg cactgagctg caacttctta cttccctgct gaaaataaga atctgaatat 3480 caatttgttt tctcaaatat ttgctatgag aggttgatgg attaattaaa taagtcaatt 3540 cctggaattt gagagagcaa ataaagacct gagaaccttc cagaatctgc atgttcgctg 3600 tgctgagtct gttgcaggtg gggtgtggag aaggctgtgg ggggccgagt gtggacgggg 3660 cctgtgccca tttggtgttg agtccatcat gggctttatg tggtcagtcc tcagctgggt 3720 caccttcact gctccattgt ccttgtccct tcagtggaaa cttgtccagt gggagctgtg 3780 accacagagg ctcacacatc gccctgggcg gcccctgcac acgggggtct ctgtgctttc 3840 tgagacaaat tttcagagcc attcacct 3868 //