Dbfetch
ID HLA02867; SV 2; standard; DNA; HUM; 3324 BP. XX AC HLA02867; XX SV HLA02867.2 XX DT 28-MAR-2007 (Rel. 2.17.0, Created, Version 1) DT 16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 2) XX DE HLA-A*02:113:01N, Human MHC Class I sequence XX KW Human MHC; HLA; Class I; HLA-A; Allele; HLA-A*02:113:01N; XX OS Homo Sapiens (human) OC Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates; OC Catarrhini; Hominidae; Homo. XX CC -------------------------------------------------------------------------- CC IPD-IMGT/HLA Release Version 3.55.0 CC -------------------------------------------------------------------------- CC Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative CC Commons Attribution-NoDerivs License, see; CC http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details. CC -------------------------------------------------------------------------- XX RN [1] RP 1-3324 RX PUBMED; 18721279. RA Hammond L, Limmer M, Dyer CR, Rantes CH, Dunn PPJ; RT "A new HLA-A*02 null allele - HLA-A*9213N."; RL Tissue Antigens 72:176-177(2008). XX RN [2] RP 1-3324 RX PUBMED; 30107213. RA Voorter CEM, Matern B, Tran TH, Fink A, Vidan-Jeras B, Montanic S, Fischer RA G, Fae I, de Santis D, Whidborne R, Andreani M, Testi M, Groeneweg M, RA Tilanus MGJ; RT "Full-length extension of HLA allele sequences by HLA allele-specific RT hemizygous Sanger sequencing (SSBT)."; RL Human Immunology 79:763-772(2018). XX CC -------------------------------------------------------------------------- CC The sequence below is the official allele sequence as approved by the CC WHO Nomenclature Committee for Factors of the HLA System. CC Any cross references may differ from the sequence shown below. CC -------------------------------------------------------------------------- XX DR EMBL; AM422607; AM422607.1. DR EMBL; AM422608; AM422608.1. DR EMBL; AM422609; AM422609.1. DR EMBL; EF656469; EF656469.1. DR EMBL; LT965076; LT965076.1. XX FH Key Location/Qualifiers FH FT source 1..3324 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT /ethnic="European, Undefined" FT /cell_line="1416999" FT /cell_line="48015_R98-0902-660J" FT /cell_line="BY00184" FT CDS join(297..369,500..769,1011..1286,1887..2162,2262..2378, FT 2817..2849,2992..3039,3209..3213) FT /codon_start=1 FT /gene="HLA-A" FT /allele="HLA-A*02:113:01N" FT /product="MHC Class I HLA-A*02:113:01N sequence" FT /translation="MAVMAPRTLVLLLSGALALTQTWAGSHSMRYFFTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYX" FT UTR 1..296 FT exon 297..369 FT /number="1" FT intron 370..499 FT /number="1" FT exon 500..769 FT /number="2" FT intron 770..1010 FT /number="2" FT exon 1011..1286 FT /number="3" FT intron 1287..1886 FT /number="3" FT exon 1887..2162 FT /number="4" FT intron 2163..2261 FT /number="4" FT exon 2262..2378 FT /number="5" FT intron 2379..2816 FT /number="5" FT exon 2817..2849 FT /number="6" FT intron 2850..2991 FT /number="6" FT exon 2992..3039 FT /number="7" FT intron 3040..3208 FT /number="7" FT exon 3209..3213 FT /number="8" FT UTR 3214..3324 SQ Sequence 3324 BP; 639 A; 952 C; 1022 G; 711 T; 0 other; agcagagggg tcagggcgaa gtcccagggc cccaggcgtg gctctcaggg tctcaggccc 60 cgaaggcggt gtatggattg gggagtccca gccttgggga ttccccaact ccgcagtttc 120 ttttctccct ctcccaacct atgtagggtc cttcttcctg gatactcacg acgcggaccc 180 agttctcact cccattgggt gtcgggtttc cagagaagcc aatcagtgtc gtcgcggtcg 240 cggttctaaa gtccgcacgc acccaccggg actcagattc tccccagacg ccgaggatgg 300 ccgtcatggc gccccgaacc ctcgtcctgc tactctcggg ggctctggcc ctgacccaga 360 cctgggcggg tgagtgcggg gtcgggaggg aaacggcctc tgtggggaga agcaacgggc 420 ccgcctggcg ggggcgcagg acccgggaag ccgcgccggg aggagggtcg ggcgggtctc 480 agccactcct cgtccccagg ctctcactcc atgaggtatt tcttcacatc cgtgtcccgg 540 cccggccgcg gggagccccg cttcatcgca gtgggctacg tggacgacac gcagttcgtg 600 cggttcgaca gcgacgccgc gagccagagg atggagccgc gggcgccgtg gatagagcag 660 gagggtccgg agtattagga cggggagaca cggaaagtga aggcccactc acagactcac 720 cgagtggacc tggggaccct gcgcggctac tacaaccaga gcgaggccgg tgagtgaccc 780 cggcccgggg cgcaggtcac gacctctcat cccccacgga cgggccaggt cgcccacagt 840 ctccgggtcc gagatccgcc ccgaagccgc gggaccccga gacccttgcc ccgggagagg 900 cccaggcgcc tttacccggt ttcattttca gtttaggcca aaaatccccc caggttggtc 960 ggggcggggc ggggctcggg ggaccgggct gaccgcgggg tccgggccag gttctcacac 1020 cgtccagagg atgtatggct gcgacgtggg gtcggactgg cgcttcctcc gcgggtacca 1080 ccagtacgcc tacgacggca aggattacat cgccctgaaa gaggacctgc gctcttggac 1140 cgcggcggac atggcagctc agaccaccaa gcacaagtgg gaggcggccc atgtggcgga 1200 gcagttgaga gcctacctgg agggcacgtg cgtggagtgg ctccgcagat acctggagaa 1260 cgggaaggag acgctgcagc gcacgggtac caggggccac ggggcgcctc cctgatcgcc 1320 tgtagatctc ccgggctggc ctcccacaag gaggggagac aattgggacc aacactagaa 1380 tatcgccctc cctctggtcc tgagggagag gaatcctcct gggtttccag atcctgtacc 1440 agagagtgac tctgaggttc cgccctgctc tctgacacaa ttaagggata aaatctctga 1500 aggaatgacg ggaagacgat ccctcgaata ctgatgagtg gttccctttg acacacacag 1560 gcagcagcct tgggcccgtg acttttcctc tcaggccttg ttctctgctt cacactcaat 1620 gtgtgtgggg gtctgagtcc agcacttctg agtccttcag cctccactca ggtcaggacc 1680 agaagtcgct gttccctctt cagggactag aattttccac ggaataggag attatcccag 1740 gtgcctgtgt ccaggctggt gtctgggttc tgtgctccct tccccatccc aggtgtcctg 1800 tccattctca agatagccac atgtgtgctg gaggagtgtc ccatgacaga tgcaaaatgc 1860 ctgaatgatc tgactcttcc tgacagacgc ccccaaaacg catatgactc accacgctgt 1920 ctctgaccat gaagccaccc tgaggtgctg ggccctgagc ttctaccctg cggagatcac 1980 actgacctgg cagcgggatg gggaggacca gacccaggac acggagctcg tggagaccag 2040 gcctgcaggg gatggaacct tccagaagtg ggcggctgtg gtggtgcctt ctggacagga 2100 gcagagatac acctgccatg tgcagcatga gggtttgccc aagcccctca ccctgagatg 2160 gggtaaggag ggagacgggg gtgtcatgtc ttttagggaa agcaggagcc tctctgacct 2220 ttagcagggt cagggcccct caccttcccc tcttttccca gagccgtctt cccagcccac 2280 catccccatc gtgggcatca ttgctggcct ggttctcttt ggagctgtga tcactggagc 2340 tgtggtcgct gctgtgatgt ggaggaggaa gagctcaggt ggggaagggg tgaagggtgg 2400 gtctgagatt tcttgtctca ctgagggttc caagacccag gtagaagtgt gccctgcctc 2460 gttactggga agcaccaccc acaattatgg gcctacccag cctgggccct gtgtgccagc 2520 acttactctt ttgtaaagca cctgttaaaa tgaaggacag atttatcacc ttgattacag 2580 cggtgatggg acctgatccc agcagtcaca agtcacaggg gaaggtccct gaggaccttc 2640 aggagggcgg ttggtccagg acccacacct gctttcttca tgtttcctga tcccgccctg 2700 ggtctgcagt cacacatttc tggaaacttc tctgaggtcc aagacttgga ggttcctcta 2760 ggaccttaag gccctgactc ctttctggta tctcacagga cattttcttc ccacagatag 2820 aaaaggaggg agctactctc aggctgcaag taagtatgaa ggaggctgat gcctgaggtc 2880 cttgggatat tgtgtttggg agcccatggg ggagctcacc caccccacaa ttcctcctct 2940 agccacatct tctgtgggat ctgaccaggt tctgtttttg ttctacccca ggcagtgaca 3000 gtgcccaggg ctctgatgtg tctctcacag cttgtaaagg tgagagcctg gagggcctga 3060 tgtgtgttgg gtgttgggcg gaacagtgga cacagctgtg ctatggggtt tctttccatt 3120 ggatgtattg agcatgcgat gggctgttta aagtgtgacc cctcactgtg acagatacga 3180 atttgttcat gaatattttt ttctatagtg tgagacagct gccttgtgtg ggactgagag 3240 gcaagagttg ttcctgccct tccctttgtg acttgaagaa ccctgacttt gtttctgcaa 3300 aggcacctgc atgtgtctgt gttc 3324 //