Dbfetch
ID HLA02593; SV 2; standard; DNA; HUM; 3205 BP. XX AC HLA02593; XX SV HLA02593.2 XX DT 30-JUN-2006 (Rel. 2.14.0, Created, Version 1) DT 16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 2) XX DE HLA-C*02:137, Human MHC Class I sequence XX KW Human MHC; HLA; Class I; HLA-C; Allele; HLA-C*02:137; XX OS Homo Sapiens (human) OC Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates; OC Catarrhini; Hominidae; Homo. XX CC -------------------------------------------------------------------------- CC IPD-IMGT/HLA Release Version 3.55.0 CC -------------------------------------------------------------------------- CC Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative CC Commons Attribution-NoDerivs License, see; CC http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details. CC -------------------------------------------------------------------------- XX RN [1] RP 1-3205 RX PUBMED; 18380775. RA Lazaro AM, Xiao Y, Cao K, Masaberg C, Nichol L, Ng J, Hurley CK, Posch PE; RT "Twenty-three novel alleles increase the diversity at the HLA-C locus."; RL Tissue Antigens 71:560-563(2008). XX CC -------------------------------------------------------------------------- CC The sequence below is the official allele sequence as approved by the CC WHO Nomenclature Committee for Factors of the HLA System. CC Any cross references may differ from the sequence shown below. CC -------------------------------------------------------------------------- XX DR EMBL; DQ648007; DQ648007.1. DR EMBL; MG952918; MG952918.1. XX FH Key Location/Qualifiers FH FT source 1..3205 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT /ethnic="African descent" FT /cell_line="NT00671" FT /cell_line="NT02062" FT CDS join(143..215,346..615,861..1136,1724..1999,2121..2240, FT 2680..2712,2820..2867,3031..3035) FT /codon_start=1 FT /gene="HLA-C" FT /allele="HLA-C*02:137" FT /product="MHC Class I HLA-C*02:137 sequence" FT /translation="MRVMAPRTLLLLLSGALALTETWACSHSMRYFYTAVSRPSRGEPH FT FIAVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQTDRVNLRK FT LRGYYNQSEAGSHTLQRMYGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTA FT AQITQRKWEAAREAEQLRAYLEGECVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVAGLAVLAVLAVLGAVVAVVMCRRKSSGG FT KGGSCSQAASSNSAQGSDESLIACKA" FT UTR 1..142 FT exon 143..215 FT /number="1" FT intron 216..345 FT /number="1" FT exon 346..615 FT /number="2" FT intron 616..860 FT /number="2" FT exon 861..1136 FT /number="3" FT intron 1137..1723 FT /number="3" FT exon 1724..1999 FT /number="4" FT intron 2000..2120 FT /number="4" FT exon 2121..2240 FT /number="5" FT intron 2241..2679 FT /number="5" FT exon 2680..2712 FT /number="6" FT intron 2713..2819 FT /number="6" FT exon 2820..2867 FT /number="7" FT intron 2868..3030 FT /number="7" FT exon 3031..3035 FT /number="8" FT UTR 3036..3205 SQ Sequence 3205 BP; 607 A; 936 C; 996 G; 666 T; 0 other; tcttcctgaa tactcatgac gcgtccccaa ttcccactcc cattgggtgt cgggttctag 60 agaagccaat cagcgtctcc gcagtcccgg ttctaaagtc cccagtcacc cacccggact 120 cggattctcc ccagacgccg agatgcgggt catggcgccc cgaaccctcc tcctgctgct 180 ctcgggagcc ctggccctga ccgagacctg ggcctgtgag tgcggggttg ggagggaaac 240 ggcctctgcg gagaggagcg aggggcccgc ccggcgaggg cgcaggaccc ggggagccgc 300 gcagggagga gggtcgggcg ggtctcagcc cctcctctcc cccaggctcc cactccatga 360 ggtatttcta caccgctgtg tcccggccca gccgcggaga gccccacttc atcgcagtgg 420 gctacgtgga cgacacgcag ttcgtgcggt tcgacagcga cgccgcgagt ccaagagggg 480 agccgcgggc gccgtgggtg gagcaggagg ggccggagta ttgggaccgg gagacacaga 540 agtacaagcg ccaggcacag actgaccgag tgaacctgcg gaaactgcgc ggctactaca 600 accagagcga ggccggtgag tgaccccggc ccggggcgca ggtcacgacc cctccccatc 660 ccccacggac ggcccgggtc gccccgagtc tccgggtctg agatccaccc cgaggctgcg 720 gaatccgccc agaccctcga ccggagagag ccccagtcac ctttacccgg tttcattttc 780 agtttaggcc aaaatccccg cgggttggtc ggggctgggg cggggctcgg gggacgggct 840 gaccacgggg gcggggccag ggtctcacac cctccagagg atgtacggct gcgacctggg 900 gcccgacggg cgcctcctcc gcgggtatga ccagtccgcc tacgacggca aggattacat 960 cgccctgaac gaggacctgc gctcctggac cgccgcggac acggcggctc agatcaccca 1020 gcgcaagtgg gaggcggccc gtgaggcgga gcagctgaga gcctacctgg agggcgagtg 1080 cgtggagtgg ctccgcagat acctggagaa cgggaaggag acgctgcagc gcgcgggtac 1140 caggggcagt ggggagcctt ccccatctcc tgtagatctc ccgggatggc ctcccacgag 1200 gaggggagga aaatgggatc agcgctagaa tatcgccctc ccttgaatgg agaatgggat 1260 gagttttcct gagtttcctc tgagggcccc ctctgctctc taggacaatt aagggatgaa 1320 gtccttgagg aaatggaggg gaagacagtc cctggaatac tgatcagggg tcccctttga 1380 ccactttgac cactgcagca gctgtggtca ggctgctgac ctttctctca ggccttgttc 1440 tctgcctcac gctcaatgtg tttgaaggtt tgattccagc ttttctgagt ccttcggcct 1500 ccactcaggt caggaccaga agtcgctgtt cctccctcag agactagaac tttccaatga 1560 ataggagatt atcccaggtg cctgtgtcca ggctggcgtc tgggttctgt gcccccttcc 1620 ccaccccagg tgtcctgtcc attctcagga tagtcacatg ggcgctgttg gagtgtcgca 1680 agagagatac aaagtgtctg aattttctga ctcttcccgt cagaacaccc aaagacacac 1740 gtgacccacc atcccgtctc tgaccatgag gccaccctga ggtgctgggc cctgggcttc 1800 taccctgcgg agatcacact gacctggcag cgggatggcg aggaccaaac tcaggacacc 1860 gagcttgtgg agaccaggcc agcaggagat ggaaccttcc agaagtgggc agctgtggtg 1920 gtgccttctg gagaagagca gagatacacg tgccatgtgc agcacgaggg gctgccggag 1980 cccctcaccc tgagatgggg taaggagggg gatgaggggt catgtgtctt ctcagggaaa 2040 gcagaagtcc tggagccctt cagctgggtc agggctgagg cttgggggtc agggcccctc 2100 accttcccct cctttcccag agccatcttc ccagcccacc atccccatcg tgggcatcgt 2160 tgctggcctg gctgtcctgg ctgtcctagc tgtcctagga gctgtggtgg ctgttgtgat 2220 gtgtaggagg aagagctcag gtagggaagg ggtgaggagt ggggtctggg ttttcttgtc 2280 ccactgggag tttcaagccc caggtagaag tgtgccccac ctcgttactg gaagcaccat 2340 ccacacatgg gccatcccag cctgggaccc tgtgtgccag cacttactct gttgtgaagc 2400 acatgacaat gaaggacaga tgtatcacct tgatgattat ggtgttgggg tccttgattc 2460 cagcattcat gagtcagggg aaggtccctg ctaaggacag accttaggag ggcagttgct 2520 ccagaaccca cagctgcttt ccccgtgttt cctgatcctg ccctgggtct gcagtcatag 2580 ttctggaaac ttctcttggg tccaagacta ggaggttccc ctaagattgc atggccctgc 2640 ctcctccctg tcccctcaca gggcattttc ttcccacagg tggaaaagga gggagctgct 2700 ctcaggctgc gtgtaagtga tggcggcagg cgtgtggagg agctcaccca ccccataatt 2760 cctcttgtcc cacatctcct gcgggctctg accaggtctt tttttttgtt ctaccccagc 2820 cagcaacagt gcccagggct ctgatgagtc tctcatcgct tgtaaaggtg agattctggg 2880 agctgaagtg gtcgggggtg gggcagaggg aaaaggccta ggtaatgggg atcctttgat 2940 tgggacgttt cgaatgtgtg gtgagctgtt cagagtgtca tcacttacca tgactgacct 3000 gaatttgttc atgactattg tgttctgtag cctgagacag ctgcctgtgt gggactgaga 3060 tgcaggattt cttcacacct ctcctttgtg acttcaagag cctctggcat ctctttctac 3120 aaaggcatct gaatgtgtct gcgttcctgt tagcataatg tgaggaggtg gagagacagc 3180 ccacccccgt gtccaccgtg acccc 3205 //