Dbfetch
ID HLA02552; SV 1; standard; DNA; HUM; 3510 BP. XX AC HLA02552; XX SV HLA02552.1 XX DT 30-APR-2006 (Rel. 2.14.0, Created, Version 1) DT 16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 1) XX DE HLA-H*02:04:01, Human MHC Class I sequence XX KW Human MHC; HLA; Class I; HLA-H; Allele; HLA-H*02:04:01; XX OS Homo Sapiens (human) OC Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates; OC Catarrhini; Hominidae; Homo. XX CC -------------------------------------------------------------------------- CC IPD-IMGT/HLA Release Version 3.55.0 CC -------------------------------------------------------------------------- CC Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative CC Commons Attribution-NoDerivs License, see; CC http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details. CC -------------------------------------------------------------------------- XX RN [1] RP 1-3510 RX PUBMED; 15140828. RA Stewart CA, Horton R, Allcock RJ, Ashurst JL, Atrazhev AM, Coggill P, RA Dunham I, Forbes S, Halls K, Howson JM, Humphray SJ, Hunt S, Mungall AJ, RA Osoegawa K, Palmer S, Roberts AN, Rogers J, Sims S, Wang Y, Wilming LG, RA Elliott JF, de Jong PJ, Sawcer S, Todd JA, Trowsdale J, Beck S; RT "Complete MHC haplotype sequencing for common disease gene mapping."; RL Genome Research 14:1176-1187(2004). XX CC -------------------------------------------------------------------------- CC The sequence below is the official allele sequence as approved by the CC WHO Nomenclature Committee for Factors of the HLA System. CC Any cross references may differ from the sequence shown below. CC -------------------------------------------------------------------------- XX DR EMBL; AL645929; AL645929.4. XX FH Key Location/Qualifiers FH FT source 1..3510 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT /ethnic="European" FT /cell_line="PGF" FT CDS join(301..379,504..773,1016..1291,1877..2153,2256..2372, FT 2813..2845,2988..3034,3202..3206) FT /codon_start=1 FT /gene="HLA-H" FT /allele="HLA-H*02:04:01" FT /product="MHC Class I HLA-H*02:04:01 sequence" FT UTR 1..300 FT exon 301..379 FT /number="1" FT intron 380..503 FT /number="1" FT exon 504..773 FT /number="2" FT intron 774..1015 FT /number="2" FT exon 1016..1291 FT /number="3" FT intron 1292..1876 FT /number="3" FT exon 1877..2153 FT /number="4" FT intron 2154..2255 FT /number="4" FT exon 2256..2372 FT /number="5" FT intron 2373..2812 FT /number="5" FT exon 2813..2845 FT /number="6" FT intron 2846..2987 FT /number="6" FT exon 2988..3034 FT /number="7" FT intron 3035..3201 FT /number="7" FT exon 3202..3206 FT /number="8" FT UTR 3207..3510 SQ Sequence 3510 BP; 683 A; 1011 C; 1059 G; 757 T; 0 other; gcacaggagg agcggggtca gggcgaagtc ccagggcccc aggcgtggct ctcagggtct 60 caggccccga aggcggtgta tggattgggg atgccccgcc ttagggattc gccacctccg 120 cagtttctct tcttctcaca acctgcgacg ggtccttctt ccttgatact cacgaagcgg 180 acacagttct cattcccact aggtgtcggg tttctagaga agccaatcgg tgccgccgcg 240 gtcccggttc taaagtcccc acgcacccac cgggactcag attctcccca gacgccgagg 300 atggtgctca tggcgccccg aaccctcctc ctgctgctct caggggccct ggccctgacc 360 ctgacccaga cctgggcgcg tgagtgcagg gtctgcaggg aaatggtcgg gaggagcgag 420 gggcccgccc ggcgggggcg caggacccgg ggatccgcgc agggaggagg gtcgggccgg 480 tctcagctcc tcctcgctcc caggctccca ctccatgagg tatttctaca ccaccatgtc 540 ccggcccggc cgcggggagc cccgcttcat ctccgtcggc tacgtggacg atacgcagtt 600 cgtgcggttc gacagcgacg acgcgagtcc gagagaggag ccgcgggcgc cgtggatgga 660 gcgggagggg ccagagtatt gggaccggaa cacacagatc tgcaaggccc aggcacagac 720 tgaacgagag aacctgcgga tcgcgctccg ctactacaac cagagcgagg gcggtgagtg 780 accccggccc ggggcgcagg tcacgacccc tccccatccc ccacggaggg ccgggtcgcc 840 tcgagtctct gggtccgaga tccaccccga aaccgcggga ccccgagacc cttgacctgg 900 gagaggccca ggcgccttta cccggtttca ttttcagttt aggccaaaac ccccgcgggt 960 tggtcggggc agggcggggc tcgggggacc gggctgaccg cgggggcggg gccaggttct 1020 cacaccatgc aggtgatgta tggctgcgac gtggggcccg acgggcgctt cctccgcggg 1080 tatgaacagc acgcctacga cggcaaggat tacatcgccc tgaacgagga cctgcgctcc 1140 tggaccgcgg cggacatggc agctcagatc accaagcgca agtgggaggc ggcccgtcgg 1200 gcggagcagc tgagagccta cctggagggc gagttcgtgg agtggctccg cagatacctg 1260 gagaacggga aggagacgct gcagcgcgcg ggtaccaggg gccacagggc gcctcccgga 1320 tcgcctgtag atctccgggg ctggcctccc acaagaaagg gagacaaatg ggaccaacac 1380 tataatatcg ccctccctct ggtcttgagg gagaagaatc ctcctgggtt tccagagagt 1440 gactctgagg gtccgccctg ctctctgaca caattaaggg atgaaatctg tgaggaaatg 1500 aagggaagac aatccctgga atactgatga gtggttccct ttgacactgg cagcagcctt 1560 gggccccgtg acttttcctc tcaggccttg ttctctgctt cacactcaat gtgcgtgggg 1620 gtctgagtcc agctcttctg agtccctcag cctccactca ggtcaggacc agaagtcgct 1680 gttccctctt cagggactag aattttccac ggaataggag attatcccag gtgcctgtgt 1740 ccaggctgtt gtctgggttc tgtgctccct tccccacccc aggcatcctg tccattctca 1800 agatggccac atgcgtgctg gaggagtgtc ccatgacaga tgcaaaatgc ctgaattttc 1860 tgactcttcc cgtcagaccc cccccaagac acatatgacc caccacccca tctctgacca 1920 tgaggccacc ctgaggtgct gggccctggg cttctaccct gcggagatca cactgacctg 1980 gcagcgggat ggggaggacc agacccagga cacggagctc gtggagacca ggcctgcagg 2040 ggatggaacc ttccagaagt gggcggctgt ggtggtgcct tctggagagg agcagagata 2100 cacctgccat gtgcagcatg agggtctgcc cgagcccctc accctgagat ggggtaagga 2160 gggagatggg ggtgtcatgt ctcttaggga aagccggagc ctctctggag agctttagca 2220 gggtcagggt ccctcacctt cccccctttt cccagagcca tcttcccagc ccaacgtccc 2280 catcgtgggc atcgttgctg gcctggttct acttgtagct gtggtcactg gagctgtggt 2340 cgctgctgta atgtggagga agaagagctc aggtaaggaa ggggtgagga gtgtggtctg 2400 agatttcttg tctcactgag agttccaagc cccaggtaga agtgccctgc ctggttactg 2460 ggaagcacca tccacactca tgggcctacc cagcctgggc cgtgtgtgcc agcacttact 2520 cttttgtaaa gcacctgtta caatgaggga cagatttatc accttgatga ctgtggtgat 2580 gggacctgat cccagcagtc acaagtcaca ggggaaggtc cccaaggaca gacctcagaa 2640 gggcggttgg tccaggaccc atatctgctt tcttcatgtt tcctgatccc accctgggtc 2700 tgcagttgca catttctgga aacttctctg gggtccgaga cttggaggtt cctctaggac 2760 cttatggccc tggcttcttt ctggcatctc acaggacatt ttcttcccac agatagaaaa 2820 ggagggagct actctcaggc tgcaagtaag tatgaaggag gctgatccct gaaatccttt 2880 ggatattgtg tttgggagcc catgggggag ctcacccacc ccacaattct tcctctagcc 2940 acatctactg tgggatctga ccaggtcctg tttttattct actcgaggca gcaacagtgc 3000 ccagggctct gatgtgtctc tcacggcttg aaaggtgaga ccttgggggg cctgatgtgt 3060 gggggatgtt gggggggaac agtggacaca gctgtgctat ggggttcttt gaatttgatg 3120 ttttgagcat gcgatgggct gccaaagtgt catccattac tgggacagat atgaatttgt 3180 tcatgaatat tttttctata gtgtgagaca gctgccttgt gtgggactga gaggcaagag 3240 ttgttcctgc cttccctttg tgacttgaag aaccctgact ttctttctac aaaggcacct 3300 gaatgtgtct gtgttcctgt aggcataatg tgtggaggag gggagaccaa cccaccctca 3360 tgtccaccat gaccctcttc cccacgctga tctgtgttcc ctccccaatc atctttcctg 3420 ttccagagag gaggggctga gatgtctcca tctttttctc aactttatgt gcactgagct 3480 gtaacttctt acttccctct taaaattaga 3510 //