Dbfetch
ID HLA02269; SV 2; standard; DNA; HUM; 3543 BP. XX AC HLA02269; XX SV HLA02269.2 XX DT 25-JUL-2005 (Rel. 2.11.0, Created, Version 1) DT 16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 2) XX DE HLA-F*01:01:01:07, Human MHC Class I sequence XX KW Human MHC; HLA; Class I; HLA-F; Allele; HLA-F*01:01:01:07; XX OS Homo Sapiens (human) OC Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates; OC Catarrhini; Hominidae; Homo. XX CC -------------------------------------------------------------------------- CC IPD-IMGT/HLA Release Version 3.55.0 CC -------------------------------------------------------------------------- CC Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative CC Commons Attribution-NoDerivs License, see; CC http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details. CC -------------------------------------------------------------------------- XX RN [1] RP 1-3543 RX PUBMED; 16570139. RA Pyo CW, Williams LM, Moore Y, Hyodo H, Li SS, Zhao LP, Sageshima N, RA Ishitani A, Geraghty DE; RT "HLA-E, HLA-F, and HLA-G polymorphism: genomic sequence defines haplotype RT structure and variation spanning the nonclassical class I genes."; RL Immunogenetics 58:241-251(2006). XX CC -------------------------------------------------------------------------- CC The sequence below is the official allele sequence as approved by the CC WHO Nomenclature Committee for Factors of the HLA System. CC Any cross references may differ from the sequence shown below. CC -------------------------------------------------------------------------- XX DR EMBL; AY645751; AY645751.1. XX FH Key Location/Qualifiers FH FT source 1..3543 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT /ethnic="European" FT /cell_line="1408-1012" FT /cell_line="1408-1038" FT CDS join(301..364,495..764,1010..1285,1868..2143,2283..2399, FT 2847..2879,3239..3243) FT /codon_start=1 FT /gene="HLA-F" FT /allele="HLA-F*01:01:01:07" FT /product="MHC Class I HLA-F*01:01:01:07 sequence" FT /translation="MAPRSLLLLLSGALALTDTWAGSHSLRYFSTAVSRPGRGEPRYIA FT VEYVDDTQFLRFDSDAAIPRMEPREPWVEQEGPQYWEWTTGYAKANAQTDRVALRNLLR FT RYNQSEAGSHTLQGMNGCDMGPDGRLLRGYHQHAYDGKDYISLNEDLRSWTAADTVAQI FT TQRFYEAEEYAEEFRTYLEGECLELLRRYLENGKETLQRADPPKAHVAHHPISDHEATL FT RCWALGFYPAEITLTWQRDGEEQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCH FT VQHEGLPQPLILRWEQSPQPTIPIVGIVAGLVVLGAVVTGAVVAAVMWRKKSSDRNRGS FT YSQAAV" FT UTR 1..300 FT exon 301..364 FT /number="1" FT intron 365..494 FT /number="1" FT exon 495..764 FT /number="2" FT intron 765..1009 FT /number="2" FT exon 1010..1285 FT /number="3" FT intron 1286..1867 FT /number="3" FT exon 1868..2143 FT /number="4" FT intron 2144..2282 FT /number="4" FT exon 2283..2399 FT /number="5" FT intron 2400..2846 FT /number="5" FT exon 2847..2879 FT /number="6" FT intron 2880..3238 FT /number="6" FT exon 3239..3243 FT /number="7" FT UTR 3244..3543 SQ Sequence 3543 BP; 731 A; 962 C; 1061 G; 789 T; 0 other; gggaggggga gggcaaagtc ccagggcccc aggagtggct ctcaagggct caggccccga 60 ggcggtgtct ggggttggga ggctcagtat tgagaattcc ccatctcccc agagtttctc 120 tttctctccc aacccgtgtc aggtccttct tcctggatac tcataacgcg gccccatttc 180 tcactcccat tgggcgtcgc gtttctagag aagccaatca gtgtcgccgc agttcccagg 240 ttctaaagtc ccacgcaccc cgcgggactc atatttttcc cagacgcgga ggttggggtc 300 atggcgcccc gaagcctcct cctgctgctc tcaggggccc tggccctgac cgatacttgg 360 gcgggtgagt gcggggtcca gagagaaacg gcctctgtgg ggaggagtga ggggcccgcc 420 cggtgggggc gcaggactca gggagccgcg cccggaggag ggtctggcgg gtctcagccc 480 ctcctcgccc ccaggctccc actccttgag gtatttcagc accgctgtgt cgcggcccgg 540 ccgcggggag ccccgctaca tcgccgtgga gtacgtagac gacacgcaat tcctgcggtt 600 cgacagcgac gccgcgattc cgaggatgga gccgcgggag ccgtgggtgg agcaagaggg 660 gccgcagtat tgggagtgga ccacagggta cgccaaggcc aacgcacaga ctgaccgagt 720 ggccctgagg aacctgctcc gccgctacaa ccagagcgag gctggtgagt gaacccggcc 780 gggggcgcag gtcacgacca ccccccatcc gccacggacc gcccgggtcc ctcagagtct 840 ccggatccga aatctacccc gaggcagcgg gacccgccca gaccctccac ccgggagagt 900 cccaggcgcc tttacccagg ttcattttca gtttaggcca aaatccccgc gggttgggcg 960 gggagggggc ggggctagct gggcggggct gactgcgggg accggctagg gtctcacacc 1020 ctccagggaa tgaatggctg cgacatgggg cccgacggac gcctcctccg cgggtatcac 1080 cagcacgcgt acgacggcaa ggattacatc tccctgaacg aggacctgcg ctcctggacc 1140 gcggcggaca ccgtggctca gatcacccag cgcttctatg aggcagagga atatgcagag 1200 gagttcagga cctacctgga gggcgagtgc ctggagttgc tccgcagata cttggagaat 1260 gggaaggaga cgctacagcg cgcaggtacc aggggccatg ggcgccttcc ctatctcctg 1320 tagatctctt gggatggcct cgcacaaggt tgggaggaaa gtgggcccaa tgctaggata 1380 tcgccctccc tctagtcctg agtaggaaga atcttcctgg ctttcgagat ccggtaccag 1440 agagtgactg tgagagtccg ccctgctctc tgggacaatt aagggatgaa atctctgagg 1500 gaatggaggg aagacagtcc ctggaatacc gatccgcggt cccctttgag ccctccaaca 1560 gccttgggcc ccgtgacttt tctctcaagt tttgttctct gcctcacact caatgtgttt 1620 ggggctctga ttccagtccc tcggcctcca cttaggtcag ggccagaagt ccctgctccc 1680 ccctcagaga ctcgaacttt ccaaggaata ggagattttc ccaggtgtct gtgtccaggc 1740 tggtgtctgg gttctgtgct cccttcccca ccccaggtgt cctgtccatt ctcaggttgg 1800 tcacatgggt gctgctgggg tttcccatga ggagtgcaaa gtgcctgaat tttctgactc 1860 ttctcagatc ctccaaaggc acacgttgcc caccacccca tctctgacca tgaggccacc 1920 ctgaggtgct gggccctggg cttctaccct gcggagatca cgctgacctg gcagcgggat 1980 ggggaggaac agacccagga cacagagctt gtggagacca ggcctgcagg ggatggaacc 2040 ttccagaagt gggccgctgt ggtggtgcct tctggagagg aacagagata cacatgccat 2100 gtgcagcacg aggggctgcc ccagcccctc atcctgagat ggggtaagga gggagatggg 2160 taaagagggg aacgaggggt catgtctttt ctcagggaaa gcaggagccc ttctggagct 2220 cttcagcagg gtcagggctg agcctggaga tcagggcccc tcaccttccc ttcctttccc 2280 agagcagtct ccccagccca ccatccccat cgtgggcatc gttgctggcc ttgttgtcct 2340 tggagctgtg gtcactggag ctgtggtcgc tgctgtgatg tggaggaaga agagctcagg 2400 taggaagggg tgaggagtgg agtctgagtt ttcttgtccc actgggggtt gcaagcccca 2460 agtagaagtg tgccctgcct cattactggg aagcaccatc cacactcatg ggtctaccca 2520 gcctgggccc tgtgtgccag cacctactca tttgtaaagc tcctgtgaaa atgaaggaca 2580 gattcttcac ttcgatgatt atggtggtga tgggacctga tcccagcagt cacaaatcac 2640 aggggaaggt ccctgctgat gacagacctc aggagggcag ttggtccagg acccacatct 2700 gctttcttca tatttcttga tcctgccctg gatctacagt tacacttttc tggaaacttc 2760 tctgggatca aagactaggg gtttgctcta ggaccttatg gccctgcctc ctttctggcc 2820 tctcacagga cattttcttc ccatagatag aaacagaggg agctactctc aggctgcagg 2880 taagatgaag gaggctgatc cctgagattg ttgggatatt gtggtcagga gcctatgagg 2940 gagctcaccc accccacagt tcctctagcc acatctgtgg gctctgacca ggtcctgttt 3000 ttgttctacc ccaatcactg acagtgccca gggctctggg gtgtctctca cagctaataa 3060 aggtgacact ccagggcagg ggccctgatg tgagtggggt gttggggggg aacagagggg 3120 actcagctgt gctattgggt ttctttgact tggatgtctt gagcatgaaa tgggctattt 3180 agagtgttac ctctcactgt gactgatacg aatttgttca tgaatatttt ctctatagtg 3240 tgagacagct tccttgtgtg ggactgagaa gcaagatatc aatgtagcag aattgcactt 3300 gtgcctcacg aacatacata aattttaaaa ataaagaata aaaatatatc tttttataga 3360 tacaggtaga tatgttttta tagcatgcac gtaaatgtgt gtgtgtgtgt gtgtgaagag 3420 aaagagtgaa tagagagatt aagattcttt taatggtgaa aagatataca tatatttgga 3480 attagccagc ttgactcagt ttaggtgatc ccaattttgg tggcaacaac caaagcatcg 3540 tag 3543 //