Dbfetch
ID HLA02108; SV 2; standard; DNA; HUM; 3319 BP. XX AC HLA02108; XX SV HLA02108.2 XX DT 31-JAN-2005 (Rel. 2.9.0, Created, Version 1) DT 16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 2) XX DE HLA-A*01:12, Human MHC Class I sequence XX KW Human MHC; HLA; Class I; HLA-A; Allele; HLA-A*01:12; XX OS Homo Sapiens (human) OC Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates; OC Catarrhini; Hominidae; Homo. XX CC -------------------------------------------------------------------------- CC IPD-IMGT/HLA Release Version 3.55.0 CC -------------------------------------------------------------------------- CC Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative CC Commons Attribution-NoDerivs License, see; CC http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details. CC -------------------------------------------------------------------------- XX RN [1] RP 1-3319 RX PUBMED; 18069934. RA Lazaro A, Xiao Y, Cao K, Masaberg C, Nichol L, Ng J, Hurley CK, Posch P; RT "Thirty-two novel HLA-A alleles identified during intermediate resolution RT testing."; RL Tissue Antigens 71:165-168(2008). XX CC -------------------------------------------------------------------------- CC The sequence below is the official allele sequence as approved by the CC WHO Nomenclature Committee for Factors of the HLA System. CC Any cross references may differ from the sequence shown below. CC -------------------------------------------------------------------------- XX DR EMBL; AH014615; AH014615.2. DR EMBL; AH015075; AH015075.2. DR EMBL; AY870930; AY870930.1. DR EMBL; AY870931; AY870931.1. DR EMBL; DQ086786; DQ086786.1. DR EMBL; DQ086787; DQ086787.1. DR EMBL; MN402710; MN402710.1. XX FH Key Location/Qualifiers FH FT source 1..3319 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT /ethnic="African descent, Undefined" FT /cell_line="NT000524" FT /cell_line="NT00586" FT /cell_line="NT02282" FT CDS join(117..189,320..589,831..1106,1686..1961,2064..2180, FT 2623..2655,2798..2845,3015..3019) FT /codon_start=1 FT /gene="HLA-A" FT /allele="HLA-A*01:12" FT /product="MHC Class I HLA-A*01:12 sequence" FT /translation="MAVMAPRTLLLLLSGALALTQTWAGSHSMRYFFTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQKMEPRAPWIEQEGPEYWDQETRNMKAHSQTDRANLGT FT LRGYYNQSEDGSHTIQIMYGCDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMA FT AQITKRKWEAAHVAEQQRAYLEGTCVDGLRRYLENGKETLQRTDPPKTHMTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWELSSQPTIPIVGIIAGLVLLGAVITGAVVAAVMWRRKSSDRK FT GGSYTQAASSDSAQGSDVSLTACKV" FT UTR 1..116 FT exon 117..189 FT /number="1" FT intron 190..319 FT /number="1" FT exon 320..589 FT /number="2" FT intron 590..830 FT /number="2" FT exon 831..1106 FT /number="3" FT intron 1107..1685 FT /number="3" FT exon 1686..1961 FT /number="4" FT intron 1962..2063 FT /number="4" FT exon 2064..2180 FT /number="5" FT intron 2181..2622 FT /number="5" FT exon 2623..2655 FT /number="6" FT intron 2656..2797 FT /number="6" FT exon 2798..2845 FT /number="7" FT intron 2846..3014 FT /number="7" FT exon 3015..3019 FT /number="8" FT UTR 3020..3319 SQ Sequence 3319 BP; 637 A; 953 C; 1012 G; 717 T; 0 other; agttctcact cccattgggt gtcgggtttc cagagaagcc aatcagtgtc gtcgcggtcg 60 ctgttctaaa gtccgcacgc acccaccggg actcagattc tccccagacg ccgaggatgg 120 ccgtcatggc gccccgaacc ctcctcctgc tactctcggg ggccctggcc ctgacccaga 180 cctgggcggg tgagtgcggg gtcgggaggg aaaccgcctc tgcggggaga agcaaggggc 240 cctcctggcg ggggcgcagg accgggggag ccgcgccggg aggagggtcg ggcaggtctc 300 agccactgct cgcccccagg ctcccactcc atgaggtatt tcttcacatc cgtgtcccgg 360 cccggccgcg gggagccccg cttcatcgcc gtgggctacg tggacgacac gcagttcgtg 420 cggttcgaca gcgacgccgc gagccagaag atggagccgc gggcgccgtg gatagagcag 480 gaggggccgg agtattggga ccaggagaca cggaatatga aggcccactc acagactgac 540 cgagcgaacc tggggaccct gcgcggctac tacaaccaga gcgaggacgg tgagtgaccc 600 cggcccgggg cgcaggtcac gacccctcat cccccacgga cgggccaggt cgcccacagt 660 ctccgggtcc gagatccacc ccgaagccgc gggactccga gacccttgtc ccgggagagg 720 cccaggcgcc tttacccggt ttcattttca gtttaggcca aaaatccccc cgggttggtc 780 ggggcggggc ggggctcggg ggactgggct gaccgcgggg tcggggccag gttctcacac 840 catccagata atgtatggct gcgacgtggg gccggacggg cgcttcctcc gcgggtaccg 900 gcaggacgcc tacgacggca aggattacat cgccctgaac gaggacctgc gctcttggac 960 cgcggcggac atggcagctc agatcaccaa gcgcaagtgg gaggcggccc atgtggcgga 1020 gcagcagaga gcctacctgg agggcacgtg cgtggacggg ctccgcagat acctggagaa 1080 cgggaaggag acgctgcagc gcacgggtac caggggccac ggggcgcctc cctgatcgcc 1140 tatagatctc ccgggctggc ctcccacaag gaggggagac aattgggacc aacactagaa 1200 tatcaccctc cctctggtcc tgagggagag gaatcctcct gggtttccag atcctgtacc 1260 agagagtgac tctgaggttc cgccctgctc tctgacacaa ttaagggata aaatctctga 1320 aggagtgacg ggaagacgat ccctcgaata ctgatgagtg gttccctttg acaccggcag 1380 cagccttggg cccgtgactt ttcctctcag gccttgttct ctgcttcaca ctcaatgtgt 1440 gtgggggtct gagtccagca cttctgagtc tctcagcctc cactcaggtc aggaccagaa 1500 gtcgctgttc ccttctcagg gaatagaaga ttatcccagg tgcctgtgtc caggctggtg 1560 tctgggttct gtgctctctt ccccatcccg ggtgtcctgt ccattctcaa gatggccaca 1620 tgcgtgctgg tggagtgtcc catgacagat gcaaaatgcc tgaattttct gactcttccc 1680 gtcagacccc cccaagacac atatgaccca ccaccccatc tctgaccatg aggccaccct 1740 gaggtgctgg gccctgggct tctaccctgc ggagatcaca ctgacctggc agcgggatgg 1800 ggaggaccag acccaggaca cggagctcgt ggagaccagg cctgcagggg atggaacctt 1860 ccagaagtgg gcggctgtgg tggtgccttc tggagaggag cagagataca cctgccatgt 1920 gcagcatgag ggtctgccca agcccctcac cctgagatgg ggtaaggagg gagatggggg 1980 tgtcatgtct cttagggaaa gcaggagcct ctctggagac ctttagcagg gtcagggccc 2040 ctcaccttcc cctcttttcc cagagctgtc ttcccagccc accatcccca tcgtgggcat 2100 cattgctggc ctggttctcc ttggagctgt gatcactgga gctgtggtcg ctgccgtgat 2160 gtggaggagg aagagctcag gtggagaagg ggtgaagggt ggggtctgag atttcttgtc 2220 tcactgaggg ttccaagccc cagctagaaa tgtgccctgt ctcattactg ggaagcacct 2280 tccacaatca tgggccgacc cagcctgggc cctgtgtgcc agcacttact cttttgtaaa 2340 gcacctgtta aaatgaagga cagatttatc accttgatta cggcggtgat gggacctgat 2400 cccagcagtc acaagtcaca ggggaaggtc cctgaggaca gacctcagga gggctattgg 2460 tccaggaccc acacctgctt tcttcatgtt tcctgatccc gccctgggtc tgcagtcaca 2520 catttctgga aacttctctg gggtccaaga ctaggaggtt cctctaggac cttaaggccc 2580 tggctccttt ctggtatctc acaggacatt ttcttcccac agatagaaaa ggagggagtt 2640 acactcaggc tgcaagtaag tatgaaggag gctgatgcct gaggtccttg ggatattgtg 2700 tttgggagcc catgggggag ctcacccacc ccacaattcc tcctctagcc acatcttctg 2760 tgggatctga ccaggttctg tttttgttct accccaggca gtgacagtgc ccagggctct 2820 gatgtgtctc tcacagcttg taaaggtgag agcttggagg gcctgatgtg tgttgggtgt 2880 tgggtggaac agtggacaca gctgtgctat ggggtttctt tgcgttggat gtattgagca 2940 tgcgatgggc tgtttaaggt gtgacccctc actgtgatgg atatgaattt gttcatgaat 3000 atttttttct atagtgtgag acagctgcct tgtgtgggac tgagaggcaa gagttgttcc 3060 tgcccttccc tttgtgactt gaagaaccct gactttgttt ctgcaaaggc acctgcatgt 3120 gtctgtgttc gtgtaggcat aatgtgagga ggtggggaga gcaccccacc cccatgtcca 3180 ccatgaccct cttcccacgc tgacctgtgc tccctctcca atcatctttc ctgttccaga 3240 gaggtggggc tgaggtgtct ccatctctgt ctcaacttca tggtgcactg agctgtaact 3300 tcttccttcc ctattaaaa 3319 //