Dbfetch
ID HLA02083; SV 2; standard; DNA; HUM; 3334 BP. XX AC HLA02083; XX SV HLA02083.2 XX DT 31-JAN-2005 (Rel. 2.9.0, Created, Version 1) DT 16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 2) XX DE HLA-A*29:12, Human MHC Class I sequence XX KW Human MHC; HLA; Class I; HLA-A; Allele; HLA-A*29:12; XX OS Homo Sapiens (human) OC Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates; OC Catarrhini; Hominidae; Homo. XX CC -------------------------------------------------------------------------- CC IPD-IMGT/HLA Release Version 3.55.0 CC -------------------------------------------------------------------------- CC Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative CC Commons Attribution-NoDerivs License, see; CC http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details. CC -------------------------------------------------------------------------- XX RN [1] RP 1-3334 RX PUBMED; 30117314. RA Lazaro A, Hou L, Tu B, Masaberg C, Enriquez E, Gerfen J, Kariyawasam K, RA Persaud M, Qin X, Simbulan D, Xiao Y, Xun L, Yang R, Ng J, Hurley CK; RT "Full gene HLA class I sequences of 79 novel and 519 mostly uncommon RT alleles from a large United States registry population."; RL HLA 92:304-309(2018). XX CC -------------------------------------------------------------------------- CC The sequence below is the official allele sequence as approved by the CC WHO Nomenclature Committee for Factors of the HLA System. CC Any cross references may differ from the sequence shown below. CC -------------------------------------------------------------------------- XX DR EMBL; AH014641; AH014641.2. DR EMBL; AY826754; AY826754.1. DR EMBL; AY826755; AY826755.1. DR EMBL; EF656472; EF656472.1. DR EMBL; MH285587; MH285587.1. XX FH Key Location/Qualifiers FH FT source 1..3334 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT /ethnic="Hispanic or Latin American, Undefined" FT /cell_line="BY00187" FT /cell_line="NT02153" FT /cell_line="VTIS121184" FT CDS join(117..189,319..588,830..1105,1706..1981,2081..2197, FT 2638..2670,2813..2860,3030..3034) FT /codon_start=1 FT /gene="HLA-A" FT /allele="HLA-A*29:12" FT /product="MHC Class I HLA-A*29:12 sequence" FT /translation="MAVMAPRTLLLLLLGALALTQTWAGSHSMRYFTTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRALWIEQEGPEYWDLQTRNVKAQSQTDRANLGT FT LRGYYNQSEAGSHTIQMMYGCHVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMA FT AQITQRKWEAARVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHE FT ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWASVVVPSGQEQRY FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVFAGAVVAAVRWRRKSSDRK FT GGSYSQAASSDSAQGSDMSLTACKV" FT UTR 1..116 FT exon 117..189 FT /number="1" FT intron 190..318 FT /number="1" FT exon 319..588 FT /number="2" FT intron 589..829 FT /number="2" FT exon 830..1105 FT /number="3" FT intron 1106..1705 FT /number="3" FT exon 1706..1981 FT /number="4" FT intron 1982..2080 FT /number="4" FT exon 2081..2197 FT /number="5" FT intron 2198..2637 FT /number="5" FT exon 2638..2670 FT /number="6" FT intron 2671..2812 FT /number="6" FT exon 2813..2860 FT /number="7" FT intron 2861..3029 FT /number="7" FT exon 3030..3034 FT /number="8" FT UTR 3035..3334 SQ Sequence 3334 BP; 632 A; 958 C; 1014 G; 730 T; 0 other; agttctcact cccattgggt gtcgggtttc cagagaagcc aatcagtgtc gtcgcggtcg 60 cggttctaaa gtccgcacgc acccaccggg actcagattc tccccagacg ccgaggatgg 120 ccgtcatggc gccccgaacc ctcctcctgc tactcttggg ggccctggcc ctgacccaga 180 cctgggcggg tgagtgcggg gtcgtgggga aaccgcctct gcggggagaa gcaaggggcc 240 cgcccggcgg ggacgcagga cccgggtagc cgcgccggga ggagggtcgg gtgggtctca 300 gccactcctc gcccccaggc tcccactcca tgaggtattt caccacatcc gtgtcccggc 360 ccggccgcgg ggagccccgc ttcatcgccg tgggctacgt ggacgacacg cagttcgtgc 420 ggtttgacag cgacgccgcg agccagagga tggagccgcg ggcactgtgg atagagcagg 480 aggggccgga gtattgggac ctgcagacac ggaatgtgaa ggcccagtca cagactgacc 540 gagcgaacct ggggaccctg cgcggctact acaaccagag cgaggccggt gagtgacccc 600 ggcccggggc gcaggtcacg acctctcatc ccccacggac gggccgggtc gcccacagtc 660 tccgggtccg agatccaccc cgaagccgcg ggaccccgag acccttgccc cgggagaggc 720 ccaggcgcct ttacccggtt tcattttcag tttaggccaa aaatcccccc gggttggtcg 780 gggccggacg gggctcgggg gactgggctg accgtggggt cggggccagg ttctcacacc 840 atccagatga tgtatggctg ccacgtgggg tcggacgggc gcttcctccg cgggtaccgg 900 caggacgcct acgacggcaa ggattacatc gccttgaacg aggacctgcg ctcttggacc 960 gcggcggaca tggcggctca gatcacccag cgcaagtggg aggcggcccg tgtggcggag 1020 cagttgagag cctacctgga gggcacgtgc gtggagtggc tccgcagata cctggagaac 1080 gggaaggaga cgctgcagcg cacgggtacc gggggccacg gggcgcctcc ctgatcgcct 1140 gtagatctcc cgggctggcc tcccacaagg aggggagaca attgggacca acactagaat 1200 atcgccctcc ctctggtcct gagggagagg aatcctcctg ggtttccaga tcctgtacca 1260 gagagtgact ctgaggttcc gccctgctct ctgacacaat taagggataa aatctctgaa 1320 ggaatgacgg gaagacgatc cctcgaatac tgatgagtgg ttccctttga cacacaccgg 1380 cagcagcctt gggcccgtga cttttcctct caggccttgt tctctgcttc acactcaatg 1440 tgtgtggggg tctgagtcca gcacttctga gtccctcagc ctccactcag gtcaggacca 1500 gaagtcgctg ttccctcttc agggactaga attttccacg gaataggaga ttatcccagg 1560 tgcctgtgtc caggctggtg tctgggttct gtgctccctt ccccatccca ggtgtcctgt 1620 ccattctcaa gatagccaca tgtgtgctgg aggagtgtcc catgacagat gcaaaatgcc 1680 tgaatgttct gactcttcct gacagacgcc cccaagacgc atatgactca ccacgctgtc 1740 tctgaccatg aggccaccct gaggtgctgg gccctgagct tctaccctgc ggagatcaca 1800 ctgacctggc agcgggatgg ggaggaccag acccaggaca cggagcttgt ggagaccagg 1860 cctgcagggg atggaacctt ccagaagtgg gcgtctgtgg tggtgccttc tggacaggag 1920 cagagataca cctgccatgt gcagcatgag ggtctgccca agcccctcac cctgagatgg 1980 ggtaaggagg gagatggggg tgtcatgtct tttagggaaa gcaggagcct ctctgacctt 2040 tagcagggtc agggcccctc accttcccct cttttcccag agccgtcttc ccagcccacc 2100 atccccatcg tgggcatcat tgctggccta gttctctttg gagctgtgtt cgctggagct 2160 gtggtcgctg ctgtgaggtg gaggaggaag agctcaggtg gggtgaaggg atgaagggtg 2220 ggtctgagat ttcttgtctc actgagggtt ccaagaccca ggtagaagtg tgccctgcct 2280 cgttactggg aagcaccatc cacaattatg ggcctaccca gcctgggccc tgtgtgccag 2340 cacttactct tttgtaaagc acctgttaaa atgaaggaca gatttatcac cttgattacg 2400 gcggtgatgg gacctgatcc cagcagtcac aagtcacagg ggaaggtccc tgaggacctt 2460 caggagggcg gttggtccag gacccacacc tgctttcttc atgtttcctg atcccgccct 2520 gggtctgcag tcacacattt ctggaaactt ctctgaggtc caagacttgg aggttcctct 2580 aggaccttaa ggccctggct cctttctggt atctcacagg acattttctt cccacagata 2640 gaaaaggagg gagctactct caggctgcaa gtaagtatga aggaggctga tgcctgaggt 2700 ccttgggata ttgtgtttgg gagcccgtgg gggagctcac ccaccccaca attcctcctc 2760 tagccacatc ttctgtggga tctgaccagg ttctgttttt gtcctacccc aggcagtgac 2820 agtgcccagg gctctgatat gtctctcaca gcttgtaaag gtgagagcct ggagggcctg 2880 atgtgtgttg ggtgttgggc ggaacagtgg acgcagctgt gctatggggt ttctttgcat 2940 tggatgtatt gagcatgcga tgggctgttt aaagtgtgac tcctcactgt gacagatacg 3000 aatttgttca tgaatatttt tttctatagt gtgagacagc tgccttgtgt gggactgaga 3060 ggcaagattt gttcctgccc ttccctttgt gacttgaaga accctgactt tgtttctgca 3120 aaggcacctg catgtgtctg tgttcttgta ggcataatgt gaggaggtgg ggagaccacc 3180 ccacccccat gtccaccatg accctcttcc cacgctgacc tgtgctccct ccccaatcat 3240 ctttcctgtt ccagagaggt ggggctgagg tgtctccatc tctgcctcaa cttcatggtg 3300 cactgagctg taacttcttc cttccctatt aaaa 3334 //