Dbfetch
ID HLA01852; SV 3; standard; DNA; HUM; 3518 BP.
XX
AC HLA01852;
XX
SV HLA01852.3
XX
DT 15-DEC-2003 (Rel. 2.4.0, Created, Version 1)
DT 16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 3)
XX
DE HLA-A*29:11, Human MHC Class I sequence
XX
KW Human MHC; HLA; Class I; HLA-A; Allele; HLA-A*29:11;
XX
OS Homo Sapiens (human)
OC Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates;
OC Catarrhini; Hominidae; Homo.
XX
CC --------------------------------------------------------------------------
CC IPD-IMGT/HLA Release Version 3.55.0
CC --------------------------------------------------------------------------
CC Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative
CC Commons Attribution-NoDerivs License, see;
CC http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details.
CC --------------------------------------------------------------------------
XX
RN [1]
RP 1-3518
RX PUBMED; 16441495.
RA Alkharsah KR, Dedicoat M, Deluca DS, Schulz TF, Blasczyk R;
RT "Identification of two new HLA-A variants, HLA-A*2911 and HLA-A*6827.";
RL Tissue Antigens 67:170-172(2006).
XX
RN [2]
RP 1-3518
RX PUBMED; 22074999.
RA Paximadis M, Mathebula TY, Gentle NL, Vardas E, Colvin M, Gray CM,
RA Tiemessen CT, Puren A;
RT "Human leukocyte antigen class I (A, B, C) and II (DRB1) diversity in the
RT black and Caucasian South African population.";
RL Human Immunology 73:80-92(2012).
XX
CC --------------------------------------------------------------------------
CC The sequence below is the official allele sequence as approved by the
CC WHO Nomenclature Committee for Factors of the HLA System.
CC Any cross references may differ from the sequence shown below.
CC --------------------------------------------------------------------------
XX
DR EMBL; AJ580596; AJ580596.1.
DR EMBL; AJ580597; AJ580597.1.
DR EMBL; AY623048; AY623048.1.
DR EMBL; LT908386; LT908386.1.
DR EMBL; LT963457; LT963457.
DR EMBL; MH613785; MH613785.1.
XX
FH Key Location/Qualifiers
FH
FT source 1..3518
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT /ethnic="African, African descent, Undefined"
FT /cell_line="AN00867"
FT /cell_line="DNA#0283-MHH-V"
FT /cell_line="EGAN00001256168"
FT /cell_line="Eskom105-884-45"
FT /cell_line="NT02173"
FT CDS join(301..373,503..772,1014..1289,1890..2165,2265..2381,
FT 2822..2854,2997..3044,3214..3218)
FT /codon_start=1
FT /gene="HLA-A"
FT /allele="HLA-A*29:11"
FT /product="MHC Class I HLA-A*29:11 sequence"
FT /translation="MAVMAPRTLLLLLLGALALTQTWAGSHSMRYFTTSVSRPGRGEPR
FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDLQTRNVKAQSQTDRANLGT
FT LRGYYNQSEAGSHTIQMMYGCDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMA
FT APITQRKWEAARVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHE
FT ATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWASVVVPSGQEQRY
FT TCHVQHEGLPKPLTLRWEPSSQPTIPIVGIIAGLVLFGAVFAGAVVAAVRWRRKSSDRK
FT GGSYSQAASSDSAQGSDMSLTACKV"
FT UTR 1..300
FT exon 301..373
FT /number="1"
FT intron 374..502
FT /number="1"
FT exon 503..772
FT /number="2"
FT intron 773..1013
FT /number="2"
FT exon 1014..1289
FT /number="3"
FT intron 1290..1889
FT /number="3"
FT exon 1890..2165
FT /number="4"
FT intron 2166..2264
FT /number="4"
FT exon 2265..2381
FT /number="5"
FT intron 2382..2821
FT /number="5"
FT exon 2822..2854
FT /number="6"
FT intron 2855..2996
FT /number="6"
FT exon 2997..3044
FT /number="7"
FT intron 3045..3213
FT /number="7"
FT exon 3214..3218
FT /number="8"
FT UTR 3219..3518
SQ Sequence 3518 BP; 661 A; 1017 C; 1072 G; 768 T; 0 other;
caggagcaga ggggtcaggg cgaagtccca gggccccagg cgtggctctc agggtctcag 60
gccccgaagg cggtgtatgg attggggagt cccagccttg gggattcccc aactccgcag 120
tttcttttct ccctctgcca acctatgtag ggtccttctt cctggatact cacgacgcgg 180
acccagttct cactcccatt gggtgtcggg tttccagaga agccaatcag tgtcgtcgcg 240
gtcgcggttc taaagtccgc acgcacccac cgggactcag attctcccca gacgccgagg 300
atggccgtca tggcgccccg aaccctcctc ctgctactct tgggggccct ggccctgacc 360
cagacctggg cgggtgagtg cggggtcgtg gggaaaccgc ctctgcgggg agaagcaagg 420
ggcccgcccg gcggggacgc aggacccggg tagccgcgcc gggaggaggg tcgggtgggt 480
ctcagccact cctcgccccc aggctcccac tccatgaggt atttcaccac atccgtgtcc 540
cggcccggcc gcggggagcc ccgcttcatc gccgtgggct acgtggacga cacgcagttc 600
gtgcggtttg acagcgacgc cgcgagccag aggatggagc cgcgggcacc gtggatagag 660
caggaggggc cggagtattg ggacctgcag acacggaatg tgaaggccca gtcacagact 720
gaccgagcga acctggggac cctgcgcggc tactacaacc agagcgaggc cggtgagtga 780
ccccggcccg gggcgcaggt cacgacctct catcccccac ggacgggccg ggtcgcccac 840
agtctccggg tccgagatcc accccgaagc cgcgggaccc cgagaccctt gccccgggag 900
aggcccaggc gcctttaccc ggtttcattt tcagtttagg ccaaaaatcc ccccgggttg 960
gtcggggccg gacggggctc gggggactgg gctgaccgtg gggtcggggc caggttctca 1020
caccatccag atgatgtatg gctgcgacgt ggggtcggac gggcgcttcc tccgcgggta 1080
ccggcaggac gcctacgacg gcaaggatta catcgccttg aacgaggacc tgcgctcttg 1140
gaccgcggcg gacatggcgg ctccgatcac ccagcgcaag tgggaggcgg cccgtgtggc 1200
ggagcagttg agagcctacc tggagggcac gtgcgtggag tggctccgca gatacctgga 1260
gaacgggaag gagacgctgc agcgcacggg taccgggggc cacggggcgc ctccctgatc 1320
gcctgtagat ctcccgggct ggcctcccac aaggagggga gacaattggg accaacacta 1380
gaatatcgcc ctccctctgg tcctgaggga gaggaatcct cctgggtttc cagatcctgt 1440
accagagagt gactctgagg ttccgccctg ctctctgaca caattaaggg ataaaatctc 1500
tgaaggaatg acgggaagac gatccctcga atactgatga gtggttccct ttgacacaca 1560
ccggcagcag ccttgggccc gtgacttttc ctctcaggcc ttgttctctg cttcacactc 1620
aatgtgtgtg ggggtctgag tccagcactt ctgagtccct cagcctccac tcaggtcagg 1680
accagaagtc gctgttccct cttcagggac tagaattttc cacggaatag gagattatcc 1740
caggtgcctg tgtccaggct ggtgtctggg ttctgtgctc ccttccccat cccaggtgtc 1800
ctgtccattc tcaagatagc cacatgtgtg ctggaggagt gtcccatgac agatgcaaaa 1860
tgcctgaatg ttctgactct tcctgacaga cgcccccaag acgcatatga ctcaccacgc 1920
tgtctctgac catgaggcca ccctgaggtg ctgggccctg agcttctacc ctgcggagat 1980
cacactgacc tggcagcggg atggggagga ccagacccag gacacggagc ttgtggagac 2040
caggcctgca ggggatggaa ccttccagaa gtgggcgtct gtggtggtgc cttctggaca 2100
ggagcagaga tacacctgcc atgtgcagca tgagggtctg cccaagcccc tcaccctgag 2160
atggggtaag gagggagatg ggggtgtcat gtcttttagg gaaagcagga gcctctctga 2220
cctttagcag ggtcagggcc cctcaccttc ccctcttttc ccagagccgt cttcccagcc 2280
caccatcccc atcgtgggca tcattgctgg cctagttctc tttggagctg tgttcgctgg 2340
agctgtggtc gctgctgtga ggtggaggag gaagagctca ggtggggtga agggatgaag 2400
ggtgggtctg agatttcttg tctcactgag ggttccaaga cccaggtaga agtgtgccct 2460
gcctcgttac tgggaagcac catccacaat tatgggccta cccagcctgg gccctgtgtg 2520
ccagcactta ctcttttgta aagcacctgt taaaatgaag gacagattta tcaccttgat 2580
tacggcggtg atgggacctg atcccagcag tcacaagtca caggggaagg tccctgagga 2640
ccttcaggag ggcggttggt ccaggaccca cacctgcttt cttcatgttt cctgatcccg 2700
ccctgggtct gcagtcacac atttctggaa acttctctga ggtccaagac ttggaggttc 2760
ctctaggacc ttaaggccct ggctcctttc tggtatctca caggacattt tcttcccaca 2820
gatagaaaag gagggagcta ctctcaggct gcaagtaagt atgaaggagg ctgatgcctg 2880
aggtccttgg gatattgtgt ttgggagccc gtgggggagc tcacccaccc cacaattcct 2940
cctctagcca catcttctgt gggatctgac caggttctgt ttttgtccta ccccaggcag 3000
tgacagtgcc cagggctctg atatgtctct cacagcttgt aaaggtgaga gcctggaggg 3060
cctgatgtgt gttgggtgtt gggcggaaca gtggacgcag ctgtgctatg gggtttcttt 3120
gcattggatg tattgagcat gcgatgggct gtttaaagtg tgactcctca ctgtgacaga 3180
tacgaatttg ttcatgaata tttttttcta tagtgtgaga cagctgcctt gtgtgggact 3240
gagaggcaag atttgttcct gcccttccct ttgtgacttg aagaaccctg actttgtttc 3300
tgcaaaggca cctgcatgtg tctgtgttct tgtaggcata atgtgaggag gtggggagac 3360
caccccaccc ccatgtccac catgaccctc ttcccacgct gacctgtgct ccctccccaa 3420
tcatctttcc tgttccagag aggtggggct gaggtgtctc catctctgcc tcaacttcat 3480
ggtgcactga gctgtaactt cttccttccc tattaaaa 3518
//