Dbfetch
ID HLA01589; SV 3; standard; DNA; HUM; 6633 BP.
XX
AC HLA01589;
XX
SV HLA01589.3
XX
DT 28-MAR-2002 (Rel. 1.14.0, Created, Version 1)
DT 16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 3)
XX
DE HLA-DQB1*03:13, Human MHC Class II sequence
XX
KW Human MHC; HLA; Class II; HLA-DQB1; Allele; HLA-DQB1*03:13;
XX
OS Homo Sapiens (human)
OC Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates;
OC Catarrhini; Hominidae; Homo.
XX
CC --------------------------------------------------------------------------
CC IPD-IMGT/HLA Release Version 3.55.0
CC --------------------------------------------------------------------------
CC Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative
CC Commons Attribution-NoDerivs License, see;
CC http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details.
CC --------------------------------------------------------------------------
XX
RN [1]
RP 1-6633
RX PUBMED; 31321912.
RA Zhong XX, Quan ZR, Zeng XH, Zhang CL, Wu WD;
RT "Identification of the novel HLA-DQB1*03:13 allele by Next-Generation
RT Sequencing in a Chinese Han individual.";
RL HLA 94:394-396(2019).
XX
RN [2]
RP 1-6633
RX PUBMED; 31603279.
RA Yang KL, Lin PY;
RT "HLA-DQB1*03:13 identified in two unrelated Taiwanese individuals.";
RL HLA 95:76-78(2020).
XX
CC --------------------------------------------------------------------------
CC The sequence below is the official allele sequence as approved by the
CC WHO Nomenclature Committee for Factors of the HLA System.
CC Any cross references may differ from the sequence shown below.
CC --------------------------------------------------------------------------
XX
DR EMBL; AF479569; AF479569.1.
DR EMBL; HE995409; HE995409.1.
DR EMBL; LR215988; LR215988.1.
DR EMBL; MG969503; MG969503.1.
DR EMBL; MZ779104; MZ779104.1.
XX
FH Key Location/Qualifiers
FH
FT source 1..6633
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT /ethnic="Asian, Undefined"
FT /cell_line="10993426"
FT /cell_line="D261617"
FT /cell_line="D426269"
FT /cell_line="NGR0061"
FT /cell_line="SZGSQ-36"
FT CDS join(36..144,1593..1862,4492..4773,5291..5401,6522..6535)
FT /codon_start=1
FT /gene="HLA-DQB1"
FT /allele="HLA-DQB1*03:13"
FT /product="MHC Class II HLA-DQB1*03:13 sequence"
FT /translation="MSWKKALRIPGGLRAATVTLMLAMLSTPVAEGRDSPEDFVYQFKA
FT MCYFTNGTERVRYVTRYIYNREEYARFDSDVEVYRAVTPLGPPDAEYWNSQKEDLERTR
FT AELDTVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPAQIKVRW
FT FRNDQEETTGVVSTPLIRNGDWTFQILVMLEMTPQHGDVYTCHVEHPSLQNPITVEWRA
FT QSESAQSKMLSGIGGFVLGLIFLGLGLIIHHRSQKGLLH"
FT UTR 1..35
FT exon 36..144
FT /number="1"
FT intron 145..1592
FT /number="1"
FT exon 1593..1862
FT /number="2"
FT intron 1863..4491
FT /number="2"
FT exon 4492..4773
FT /number="3"
FT intron 4774..5290
FT /number="3"
FT exon 5291..5401
FT /number="4"
FT intron 5402..5886
FT /number="4"
FT exon 5887..5910
FT /number="5"
FT /pseudo
FT intron 5911..6521
FT /number="5"
FT exon 6522..6535
FT /number="6"
FT UTR 6536..6633
SQ Sequence 6633 BP; 1686 A; 1537 C; 1610 G; 1800 T; 0 other;
tgttgactac cactactttt cccttcgtct caattatgtc ttggaaaaag gctttgcgga 60
tccccggagg ccttcgggca gcaactgtta ccttgatgct ggcgatgctg agcaccccag 120
tggctgaggg cagagactct cccggtaagt gcagggcagc tgctctccag agccgccact 180
ctgggaacag actctccttg ggctggggta tggggatggt gatctcgatt atctcagaca 240
caatctttat caatatttcc tctgttttgg gaaagagagc tatgttgcat tcccatttat 300
cttttaatga tgaggtgagg acaatccaat cccatcctac agacttaagc ctggaagagg 360
agagaggaga gaaaagagga gacaaagtgt tcatttacta ccagtgatag gacaaagtga 420
gcatggggtt atttttgaag atatgaattt ctccaaagac acagcatgat ttgtcattta 480
ggcgtgcccc aagactgcct ggactaacta ttatgagatc ctgcactggg aaatgtaagg 540
cagcaatggt gtctgtagtc cccgtatttg gggaaaaggt gtctgtattc ctgactcagt 600
ggagcgtttg tggaggcaaa atcttggtac tgagggaagc tgactggctg accacagaca 660
gggagtcttc aggtttcact gatttatggg caaatggtga cctgagtggg attcagagac 720
ccgagttgat ggtggactaa atttagtaga aaggaggatg taaagaagag aaattataca 780
tactgtgaaa ccactcattt cagacacaga acaatacttt acataaattc tctctcactc 840
cttctaacat cctgtgtgta gatatcatga ttttctttta cacaattata cttgtgacat 900
ggatattctg ttacgtaacc tgcccgagct ggtgactgcc acagtttaat gggattctag 960
tttatcaaat tcaaaagctt gtgctctttc agtgaataaa cgtttctttc taggactcag 1020
agatctagga ctcccttctt tctaacacag aagtgagtga acctcacagg gcacttggga 1080
gggtaaatcc aggcatggga aggaaggtat tttacccagg gaccaagaga ataggcatat 1140
caaaagagga caggtttaat tcctggacct gtctcgtcat tcccttgaac tctcaggttt 1200
atgtggataa ctttatctct gaggtaccca ggagctccat ggaaaatggg atttcatgcg 1260
agaacgccct gatccctcta agtgcagagg tccgtgcaaa atcaacccga ctgcctcttc 1320
gcttggttca caggcccagc cagacaggga cagggctttc ctccctttcc tgcctgtagg 1380
aaggcggatt cccgaagacc cccgagaggg cgggcagggc tgggcagagc ccccgggagg 1440
atcccaggtc tgcagcgcga ggcacgggcc ggcgggaact ggaggtcgcg cgggcggttc 1500
cacagctccg ggccgggtca gggcggcggc tgcggggtgg ccgggctggg gccgggccgg 1560
ggccggactg accggccggt gattccccgc agaggatttc gtgtaccagt ttaaggccat 1620
gtgctacttc accaacggga cggagcgcgt gcgttatgtg accagataca tctataaccg 1680
agaggagtac gcacgcttcg acagcgacgt ggaggtgtac cgggcggtga cgccgctggg 1740
gccgcctgac gccgagtact ggaacagcca gaaggaagac ctggagagga cccgggcgga 1800
gttggacacg gtgtgcagac acaactacca gttggagctc cgcacgacct tgcagcggcg 1860
aggtgagcgt cgtcgccccg ctgcgaggcc cactcttggc cggggccccg agtctctgcg 1920
ctaggaggga cgaggggggc gaagcctctg gaacctgagc cgcgttcgtt ccaccccagg 1980
ggacaggagt tggcggcgtg ggtggtgggg caggtgcata ggaggggcag ggacctaggg 2040
gcagagcagg ggtacaggta gagttggtca aactgcctag ttttgcccca gccttcccgt 2100
ccgtcagcct cgccctctgc tgtgcacgtt ctcgcctcgt gccttatgcg tttgcctcct 2160
cgtgccttgc ctttgctaag cagtcctctc tgcccccaat ttctgccctc ttcccctgcc 2220
cgcccgcccc gctagcactg ccccacccag caaggtccac gtgcactgct cgcgccgcag 2280
gaagcttcag gcttggcctg gtggagttag ggctgctcca caactgtgcg cagggcatcc 2340
agcaattaca gttgtgaaat aagatatttt gacttttggc ttcaaattat tattcatcgt 2400
aattccgttt tcttaaatgg ctctcattca tggcggagct ctttgaggtg agagtgtttt 2460
aatcatttta tggccggtac ctgacacatt gactggcatg tggtataagc tcaataatct 2520
tctgttaaat taatgaataa atgtgctcag ctgccaatcc acttaggctc aagaaaaacc 2580
agaggtaaac agaaccttaa aaatggactt ttattaatta ttttctatca ttttgcttaa 2640
ttctttaaag taaactctta ttgacttgga tctaaatagt ttgtgaatac aaagtctgag 2700
gaaaaaagtg tttgctaaaa ataaaaacaa cacttgaatg atgtttgtaa ggcagtttta 2760
atttcttaga aaagctgaac aaatggcaca atgcaaagag cagaagtttt ggaataaata 2820
gattgaagcc attaaattat tggataaaaa tagtttcagg ttgcttttgg cctaggttct 2880
cccctccccc catcactatc cacttcagga ataaacattc tgaaagttaa ttttacccat 2940
atagtgagca cttatttcta agttgcctta tcaaatacca tctatgttat gtcatttaat 3000
ctcgcagttg cctgtgcatt agagattagc atcaccactt tatatatcct aatattagta 3060
catgataaac actttaagta atcagcccac aagtactcac caagacctta agcctcccaa 3120
agtacacaac attcttacgt tcctcactac acatctgtag agtcaaaggg acataaagcc 3180
ttgttaaagc cagttttgac cagaagcagc aatggtctct tcctgtttga tctccatgtt 3240
aatgggacaa aatgatactt tcaaggcatt gaaaatttat gattaatcaa tcaaatttat 3300
gattaatcaa tccctagtct gactccagtg agattcacaa aactttcagt ttactttata 3360
ctcccttgcc ttcttttgac tcacatcata gtgccagcaa gtacttatat ttttgctatt 3420
tcagttctat ttccataaaa tttattttat catcttttct cataaatttg tgccctctat 3480
ttttactccc aatctgtgta agatgaacaa atcttataag accacatagc tgactgtgat 3540
ttcaggtgga ctccaggaag gagaaccaaa gaaaactttc agtcttttta agatgaacaa 3600
atcttgtaag tccccacata gctgactgtg atttcaggtg gactccagga aggagaacca 3660
aagaaaagtt caagtccaag cagaaaccgt gattccttcc ggatgatggc tcatgagtgc 3720
catttaattg gggtgccacc tgctgtcctc agcaaatccc agctatatgt atatgttcgc 3780
attacaggct cattaaccta ggctgacctc tgcaaggatc tcagaatatt ttctacagag 3840
aacatacatg ataatatctg attttaggac aaaaaagtaa ttctcaatag caagggaatg 3900
gagtagggta gacagctagt aattaaactc acttgtgtgt taaaaataaa ttaaggaaaa 3960
aagaaaatga gagaacatat tactaaataa agaaagcata cattaaatat ttactatagt 4020
tttacactaa gagaataaag gaaatgcaat aaagtggcct gaaaggtaaa ggatgagatg 4080
tgtaaaagag gcggggaaag atgtgtcatt ttttttttac tatgagcagc aatctgagaa 4140
gataaaggaa tcgagttatg ggcagacatg atgtttgatc agtgttattt gttttcaagg 4200
cctgcctact tttttttcaa atattacaaa cttttgaagt cacattcttt ttgttttttg 4260
ctgtctgtta ctagatcgca cattctgtaa aggcagggac catggtatgt tgtttatctt 4320
tggattctca gtgattgtca tatttatgtt tgttgaatga atcttaatcc aagacttggg 4380
ctccaggtat ctttccattc tggttccaag gagggacctt cctcacagca ggcgtgctgt 4440
gtggtctcac atctcactcc tatatctttc cctgtctgtt actgccctca gtggagccca 4500
cagtgaccat ctccccatcc aggacagagg ccctcaacca ccacaacctg ctggtctgct 4560
cagtgacaga tttctatcca gcccagatca aagtccggtg gtttcggaat gaccaggagg 4620
agacaaccgg cgttgtgtcc acccccctta ttaggaacgg tgactggacc ttccagatcc 4680
tggtgatgct ggaaatgact ccccagcatg gagacgtcta cacctgccac gtggagcacc 4740
ccagcctcca gaaccccatc accgtggagt ggcgtaaggg gatattgagt ttctgttact 4800
atgggcccca caagacaaag ggcagagctc attctgaccc atcccttccc atctcttatc 4860
cctgatgtca ctactgagct gggaatcaca ggagactaga gcacttcttc ctccatggca 4920
agtgcatcag aagaatcctg atctcatcac ctttccagat gctagggaaa ttactctaca 4980
tactgtttct ctggatccca gtcctgatag ctcggaggga ctgatcatta gggctggtga 5040
ctgggatctt agggtttaag gttatggatg agctcctgag gagtggagat ctgcttctcc 5100
actctctcac ctactcactg tacccaagga cctattggct ggcctttccc ctcccttagg 5160
ggtggtctga atggaggact agtttccttt gacgccttca cctcctgaat ctcagactgg 5220
acttcagctc ctcagcaggg atgctatggg gtgtggggac aaacactgac actcaggctc 5280
tgcttcttag gggctcagtc tgaatctgcc cagagcaaga tgctgagtgg cattggaggc 5340
ttcgtgctgg ggctcatctt cctcgggctg ggccttatta tccatcacag gagtcagaaa 5400
ggtgaggaac cccaagggaa aaggggaaga tgggctgtga cccagaccct ctgttcagag 5460
aggtcctgtc tctagatgtg gctctttcct cctgaccccg agaggaagaa agctgagctg 5520
gaggtgggag gagacaggac aagattggag gaggcattgg aatctgattt tactagttga 5580
aaggtagccc tgtcacacag ctcactgata gagcttattg aaggacatcc ttacctttca 5640
tcattgtctc attggctcct ttccaaaagc ttcctccatt aagagggtca gagccttggc 5700
ctccttgcct tctagtgaca atttcctttg ttttagggga ttttaaatta gggtgcttaa 5760
ggccttgaag gacatgggtg ggaagagaat ataactctaa ttaagtcaca tgtgtcattt 5820
tccattgggg tgagagagtg gctgtttgtg taatgagacc tttctctgca taacttcctt 5880
ttgtaagacc tcaagggcct ccaccagcag gtaatatttc agccgtgatc cagtgtgggg 5940
agggcacaga tgtaagaggg aagagcatga gctgagtgta cctgaccaca gtggtctccg 6000
ttcatggtat atttgctgct atgaggatca agacttaggg gcgaagtttg ccagtttcta 6060
ggaatctcca gaggctgttc cccagaacca agccttaact ttggtggcat cttcctgtga 6120
aatgtgaagc cagaaccaca gcttaaatgt tagacactag gatgatgccc actttgtgcc 6180
acatgttggt ggctactgcc tgtaggcatt ttccagtgac tgaaagaggc tgctagtggt 6240
agggatgagg tatcatccaa tttcctaaaa agaccgaacc cttcatattc cccagaagag 6300
taacagctgt tcccccacct ccctcacatc tgcatcaagc tgaagttctg tgtcttcatg 6360
agctgatttc acctttgcac agatcttggg ggaggtgatg acaatacact ctggacctca 6420
gctttgtctg tctgaagctg cagggggccc ctgaggggtg ggggagatgg caggcccacc 6480
agcgtaccct gtgctgatca tccctcttct ctcttctcca gggctcctgc actgactcct 6540
gagactattt taactgggat tggttatcac ttttctgtaa cgcctgcttg tccctgccca 6600
gaattcccaa ctgcctgtgt cagcctgtcc ccc 6633
//