Dbfetch
ID HLA01589; SV 3; standard; DNA; HUM; 6633 BP. XX AC HLA01589; XX SV HLA01589.3 XX DT 28-MAR-2002 (Rel. 1.14.0, Created, Version 1) DT 16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 3) XX DE HLA-DQB1*03:13, Human MHC Class II sequence XX KW Human MHC; HLA; Class II; HLA-DQB1; Allele; HLA-DQB1*03:13; XX OS Homo Sapiens (human) OC Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates; OC Catarrhini; Hominidae; Homo. XX CC -------------------------------------------------------------------------- CC IPD-IMGT/HLA Release Version 3.55.0 CC -------------------------------------------------------------------------- CC Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative CC Commons Attribution-NoDerivs License, see; CC http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details. CC -------------------------------------------------------------------------- XX RN [1] RP 1-6633 RX PUBMED; 31321912. RA Zhong XX, Quan ZR, Zeng XH, Zhang CL, Wu WD; RT "Identification of the novel HLA-DQB1*03:13 allele by Next-Generation RT Sequencing in a Chinese Han individual."; RL HLA 94:394-396(2019). XX RN [2] RP 1-6633 RX PUBMED; 31603279. RA Yang KL, Lin PY; RT "HLA-DQB1*03:13 identified in two unrelated Taiwanese individuals."; RL HLA 95:76-78(2020). XX CC -------------------------------------------------------------------------- CC The sequence below is the official allele sequence as approved by the CC WHO Nomenclature Committee for Factors of the HLA System. CC Any cross references may differ from the sequence shown below. CC -------------------------------------------------------------------------- XX DR EMBL; AF479569; AF479569.1. DR EMBL; HE995409; HE995409.1. DR EMBL; LR215988; LR215988.1. DR EMBL; MG969503; MG969503.1. DR EMBL; MZ779104; MZ779104.1. XX FH Key Location/Qualifiers FH FT source 1..6633 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT /ethnic="Asian, Undefined" FT /cell_line="10993426" FT /cell_line="D261617" FT /cell_line="D426269" FT /cell_line="NGR0061" FT /cell_line="SZGSQ-36" FT CDS join(36..144,1593..1862,4492..4773,5291..5401,6522..6535) FT /codon_start=1 FT /gene="HLA-DQB1" FT /allele="HLA-DQB1*03:13" FT /product="MHC Class II HLA-DQB1*03:13 sequence" FT /translation="MSWKKALRIPGGLRAATVTLMLAMLSTPVAEGRDSPEDFVYQFKA FT MCYFTNGTERVRYVTRYIYNREEYARFDSDVEVYRAVTPLGPPDAEYWNSQKEDLERTR FT AELDTVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPAQIKVRW FT FRNDQEETTGVVSTPLIRNGDWTFQILVMLEMTPQHGDVYTCHVEHPSLQNPITVEWRA FT QSESAQSKMLSGIGGFVLGLIFLGLGLIIHHRSQKGLLH" FT UTR 1..35 FT exon 36..144 FT /number="1" FT intron 145..1592 FT /number="1" FT exon 1593..1862 FT /number="2" FT intron 1863..4491 FT /number="2" FT exon 4492..4773 FT /number="3" FT intron 4774..5290 FT /number="3" FT exon 5291..5401 FT /number="4" FT intron 5402..5886 FT /number="4" FT exon 5887..5910 FT /number="5" FT /pseudo FT intron 5911..6521 FT /number="5" FT exon 6522..6535 FT /number="6" FT UTR 6536..6633 SQ Sequence 6633 BP; 1686 A; 1537 C; 1610 G; 1800 T; 0 other; tgttgactac cactactttt cccttcgtct caattatgtc ttggaaaaag gctttgcgga 60 tccccggagg ccttcgggca gcaactgtta ccttgatgct ggcgatgctg agcaccccag 120 tggctgaggg cagagactct cccggtaagt gcagggcagc tgctctccag agccgccact 180 ctgggaacag actctccttg ggctggggta tggggatggt gatctcgatt atctcagaca 240 caatctttat caatatttcc tctgttttgg gaaagagagc tatgttgcat tcccatttat 300 cttttaatga tgaggtgagg acaatccaat cccatcctac agacttaagc ctggaagagg 360 agagaggaga gaaaagagga gacaaagtgt tcatttacta ccagtgatag gacaaagtga 420 gcatggggtt atttttgaag atatgaattt ctccaaagac acagcatgat ttgtcattta 480 ggcgtgcccc aagactgcct ggactaacta ttatgagatc ctgcactggg aaatgtaagg 540 cagcaatggt gtctgtagtc cccgtatttg gggaaaaggt gtctgtattc ctgactcagt 600 ggagcgtttg tggaggcaaa atcttggtac tgagggaagc tgactggctg accacagaca 660 gggagtcttc aggtttcact gatttatggg caaatggtga cctgagtggg attcagagac 720 ccgagttgat ggtggactaa atttagtaga aaggaggatg taaagaagag aaattataca 780 tactgtgaaa ccactcattt cagacacaga acaatacttt acataaattc tctctcactc 840 cttctaacat cctgtgtgta gatatcatga ttttctttta cacaattata cttgtgacat 900 ggatattctg ttacgtaacc tgcccgagct ggtgactgcc acagtttaat gggattctag 960 tttatcaaat tcaaaagctt gtgctctttc agtgaataaa cgtttctttc taggactcag 1020 agatctagga ctcccttctt tctaacacag aagtgagtga acctcacagg gcacttggga 1080 gggtaaatcc aggcatggga aggaaggtat tttacccagg gaccaagaga ataggcatat 1140 caaaagagga caggtttaat tcctggacct gtctcgtcat tcccttgaac tctcaggttt 1200 atgtggataa ctttatctct gaggtaccca ggagctccat ggaaaatggg atttcatgcg 1260 agaacgccct gatccctcta agtgcagagg tccgtgcaaa atcaacccga ctgcctcttc 1320 gcttggttca caggcccagc cagacaggga cagggctttc ctccctttcc tgcctgtagg 1380 aaggcggatt cccgaagacc cccgagaggg cgggcagggc tgggcagagc ccccgggagg 1440 atcccaggtc tgcagcgcga ggcacgggcc ggcgggaact ggaggtcgcg cgggcggttc 1500 cacagctccg ggccgggtca gggcggcggc tgcggggtgg ccgggctggg gccgggccgg 1560 ggccggactg accggccggt gattccccgc agaggatttc gtgtaccagt ttaaggccat 1620 gtgctacttc accaacggga cggagcgcgt gcgttatgtg accagataca tctataaccg 1680 agaggagtac gcacgcttcg acagcgacgt ggaggtgtac cgggcggtga cgccgctggg 1740 gccgcctgac gccgagtact ggaacagcca gaaggaagac ctggagagga cccgggcgga 1800 gttggacacg gtgtgcagac acaactacca gttggagctc cgcacgacct tgcagcggcg 1860 aggtgagcgt cgtcgccccg ctgcgaggcc cactcttggc cggggccccg agtctctgcg 1920 ctaggaggga cgaggggggc gaagcctctg gaacctgagc cgcgttcgtt ccaccccagg 1980 ggacaggagt tggcggcgtg ggtggtgggg caggtgcata ggaggggcag ggacctaggg 2040 gcagagcagg ggtacaggta gagttggtca aactgcctag ttttgcccca gccttcccgt 2100 ccgtcagcct cgccctctgc tgtgcacgtt ctcgcctcgt gccttatgcg tttgcctcct 2160 cgtgccttgc ctttgctaag cagtcctctc tgcccccaat ttctgccctc ttcccctgcc 2220 cgcccgcccc gctagcactg ccccacccag caaggtccac gtgcactgct cgcgccgcag 2280 gaagcttcag gcttggcctg gtggagttag ggctgctcca caactgtgcg cagggcatcc 2340 agcaattaca gttgtgaaat aagatatttt gacttttggc ttcaaattat tattcatcgt 2400 aattccgttt tcttaaatgg ctctcattca tggcggagct ctttgaggtg agagtgtttt 2460 aatcatttta tggccggtac ctgacacatt gactggcatg tggtataagc tcaataatct 2520 tctgttaaat taatgaataa atgtgctcag ctgccaatcc acttaggctc aagaaaaacc 2580 agaggtaaac agaaccttaa aaatggactt ttattaatta ttttctatca ttttgcttaa 2640 ttctttaaag taaactctta ttgacttgga tctaaatagt ttgtgaatac aaagtctgag 2700 gaaaaaagtg tttgctaaaa ataaaaacaa cacttgaatg atgtttgtaa ggcagtttta 2760 atttcttaga aaagctgaac aaatggcaca atgcaaagag cagaagtttt ggaataaata 2820 gattgaagcc attaaattat tggataaaaa tagtttcagg ttgcttttgg cctaggttct 2880 cccctccccc catcactatc cacttcagga ataaacattc tgaaagttaa ttttacccat 2940 atagtgagca cttatttcta agttgcctta tcaaatacca tctatgttat gtcatttaat 3000 ctcgcagttg cctgtgcatt agagattagc atcaccactt tatatatcct aatattagta 3060 catgataaac actttaagta atcagcccac aagtactcac caagacctta agcctcccaa 3120 agtacacaac attcttacgt tcctcactac acatctgtag agtcaaaggg acataaagcc 3180 ttgttaaagc cagttttgac cagaagcagc aatggtctct tcctgtttga tctccatgtt 3240 aatgggacaa aatgatactt tcaaggcatt gaaaatttat gattaatcaa tcaaatttat 3300 gattaatcaa tccctagtct gactccagtg agattcacaa aactttcagt ttactttata 3360 ctcccttgcc ttcttttgac tcacatcata gtgccagcaa gtacttatat ttttgctatt 3420 tcagttctat ttccataaaa tttattttat catcttttct cataaatttg tgccctctat 3480 ttttactccc aatctgtgta agatgaacaa atcttataag accacatagc tgactgtgat 3540 ttcaggtgga ctccaggaag gagaaccaaa gaaaactttc agtcttttta agatgaacaa 3600 atcttgtaag tccccacata gctgactgtg atttcaggtg gactccagga aggagaacca 3660 aagaaaagtt caagtccaag cagaaaccgt gattccttcc ggatgatggc tcatgagtgc 3720 catttaattg gggtgccacc tgctgtcctc agcaaatccc agctatatgt atatgttcgc 3780 attacaggct cattaaccta ggctgacctc tgcaaggatc tcagaatatt ttctacagag 3840 aacatacatg ataatatctg attttaggac aaaaaagtaa ttctcaatag caagggaatg 3900 gagtagggta gacagctagt aattaaactc acttgtgtgt taaaaataaa ttaaggaaaa 3960 aagaaaatga gagaacatat tactaaataa agaaagcata cattaaatat ttactatagt 4020 tttacactaa gagaataaag gaaatgcaat aaagtggcct gaaaggtaaa ggatgagatg 4080 tgtaaaagag gcggggaaag atgtgtcatt ttttttttac tatgagcagc aatctgagaa 4140 gataaaggaa tcgagttatg ggcagacatg atgtttgatc agtgttattt gttttcaagg 4200 cctgcctact tttttttcaa atattacaaa cttttgaagt cacattcttt ttgttttttg 4260 ctgtctgtta ctagatcgca cattctgtaa aggcagggac catggtatgt tgtttatctt 4320 tggattctca gtgattgtca tatttatgtt tgttgaatga atcttaatcc aagacttggg 4380 ctccaggtat ctttccattc tggttccaag gagggacctt cctcacagca ggcgtgctgt 4440 gtggtctcac atctcactcc tatatctttc cctgtctgtt actgccctca gtggagccca 4500 cagtgaccat ctccccatcc aggacagagg ccctcaacca ccacaacctg ctggtctgct 4560 cagtgacaga tttctatcca gcccagatca aagtccggtg gtttcggaat gaccaggagg 4620 agacaaccgg cgttgtgtcc acccccctta ttaggaacgg tgactggacc ttccagatcc 4680 tggtgatgct ggaaatgact ccccagcatg gagacgtcta cacctgccac gtggagcacc 4740 ccagcctcca gaaccccatc accgtggagt ggcgtaaggg gatattgagt ttctgttact 4800 atgggcccca caagacaaag ggcagagctc attctgaccc atcccttccc atctcttatc 4860 cctgatgtca ctactgagct gggaatcaca ggagactaga gcacttcttc ctccatggca 4920 agtgcatcag aagaatcctg atctcatcac ctttccagat gctagggaaa ttactctaca 4980 tactgtttct ctggatccca gtcctgatag ctcggaggga ctgatcatta gggctggtga 5040 ctgggatctt agggtttaag gttatggatg agctcctgag gagtggagat ctgcttctcc 5100 actctctcac ctactcactg tacccaagga cctattggct ggcctttccc ctcccttagg 5160 ggtggtctga atggaggact agtttccttt gacgccttca cctcctgaat ctcagactgg 5220 acttcagctc ctcagcaggg atgctatggg gtgtggggac aaacactgac actcaggctc 5280 tgcttcttag gggctcagtc tgaatctgcc cagagcaaga tgctgagtgg cattggaggc 5340 ttcgtgctgg ggctcatctt cctcgggctg ggccttatta tccatcacag gagtcagaaa 5400 ggtgaggaac cccaagggaa aaggggaaga tgggctgtga cccagaccct ctgttcagag 5460 aggtcctgtc tctagatgtg gctctttcct cctgaccccg agaggaagaa agctgagctg 5520 gaggtgggag gagacaggac aagattggag gaggcattgg aatctgattt tactagttga 5580 aaggtagccc tgtcacacag ctcactgata gagcttattg aaggacatcc ttacctttca 5640 tcattgtctc attggctcct ttccaaaagc ttcctccatt aagagggtca gagccttggc 5700 ctccttgcct tctagtgaca atttcctttg ttttagggga ttttaaatta gggtgcttaa 5760 ggccttgaag gacatgggtg ggaagagaat ataactctaa ttaagtcaca tgtgtcattt 5820 tccattgggg tgagagagtg gctgtttgtg taatgagacc tttctctgca taacttcctt 5880 ttgtaagacc tcaagggcct ccaccagcag gtaatatttc agccgtgatc cagtgtgggg 5940 agggcacaga tgtaagaggg aagagcatga gctgagtgta cctgaccaca gtggtctccg 6000 ttcatggtat atttgctgct atgaggatca agacttaggg gcgaagtttg ccagtttcta 6060 ggaatctcca gaggctgttc cccagaacca agccttaact ttggtggcat cttcctgtga 6120 aatgtgaagc cagaaccaca gcttaaatgt tagacactag gatgatgccc actttgtgcc 6180 acatgttggt ggctactgcc tgtaggcatt ttccagtgac tgaaagaggc tgctagtggt 6240 agggatgagg tatcatccaa tttcctaaaa agaccgaacc cttcatattc cccagaagag 6300 taacagctgt tcccccacct ccctcacatc tgcatcaagc tgaagttctg tgtcttcatg 6360 agctgatttc acctttgcac agatcttggg ggaggtgatg acaatacact ctggacctca 6420 gctttgtctg tctgaagctg cagggggccc ctgaggggtg ggggagatgg caggcccacc 6480 agcgtaccct gtgctgatca tccctcttct ctcttctcca gggctcctgc actgactcct 6540 gagactattt taactgggat tggttatcac ttttctgtaa cgcctgcttg tccctgccca 6600 gaattcccaa ctgcctgtgt cagcctgtcc ccc 6633 //