Dbfetch

Dbfetch

ID   HLA01540; SV 2; standard; DNA; HUM; 552 BP.
XX
AC   HLA01540;
XX
SV   HLA01540.2
XX
DT   31-OCT-2001 (Rel. 1.13.0, Created, Version 1)
DT   16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 2)
XX
DE   HLA-DRB1*14:42, Human MHC Class II sequence (partial)
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KW   Human MHC; HLA; Class II; HLA-DRB1; Allele; HLA-DRB1*14:42;
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OS   Homo Sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates;
OC   Catarrhini; Hominidae; Homo.
XX
CC   --------------------------------------------------------------------------
CC   IPD-IMGT/HLA Release Version 3.55.0
CC   --------------------------------------------------------------------------
CC   Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative
CC   Commons Attribution-NoDerivs License, see;
CC   http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details.
CC   --------------------------------------------------------------------------
XX
RN   [1]
RP   1-552
RX   PUBMED; 12144619.
RA   Gans CP, Tang TF, Slack R, Ng J, Hartzman RJ, Hurley CK;
RT   "DRB1*14 diversity and DRB3 associations in four major population groups in
RT   the United States.";
RL   Tissue Antigens 59:364-369(2002).
XX
CC   --------------------------------------------------------------------------
CC   The sequence below is the official allele sequence as approved by the
CC   WHO Nomenclature Committee for Factors of the HLA System.
CC   Any cross references may differ from the sequence shown below.
CC   --------------------------------------------------------------------------
XX
DR   EMBL; AY054375; AY054375.1.
DR   EMBL; KX059430; KX059430.1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..552
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT                   /ethnic="African descent, Undefined"
FT                   /cell_line="GN00411"
FT                   /cell_line="NT01348"
FT   CDS             join(<1..270,271..552)
FT                   /codon_start=3
FT                   /partial
FT                   /gene="HLA-DRB1"
FT                   /allele="HLA-DRB1*14:42"
FT                   /product="MHC Class II HLA-DRB1*14:42 sequence"
FT                   /translation="RFLEYSTSECHFFNGTERVRFLDRYFYNQEEYVRFDSDVGEFRAV
FT                   TELGRPDAEYWNSQKDLLERRRAEVDTYCRHNYGVGESFTVQRRVHPKVTVYPSKTQPL
FT                   QHHNLLVCSVSGFYPGSIEVRWFRNGQEEKTGVVSTGLIHNGDWTFQTLVMLETVPRSG
FT                   EVYTCQVEHPSVTSPLTVEW"
FT   exon            1..270
FT                   /number="2"
FT   exon            271..552
FT                   /number="3"
SQ   Sequence 552 BP; 123 A; 138 C; 178 G; 113 T; 0 other;
     cacgtttctt ggagtactct acgtctgagt gtcatttctt caatgggacg gagcgggtgc        60
     ggttcctgga cagatacttc tataaccaag aggagtacgt gcgcttcgac agcgacgtgg       120
     gggagttccg ggcggtgacg gagctggggc ggcctgatgc cgagtactgg aacagccaga       180
     aggacctcct ggagcggagg cgggccgagg tggacaccta ttgcagacac aactacgggg       240
     ttggtgagag cttcacagtg cagcggcgag tccatcctaa ggtgactgtg tatccttcaa       300
     agacccagcc cctgcagcac cacaacctcc tggtctgttc tgtgagtggt ttctatccag       360
     gcagcattga agtcaggtgg ttccggaatg gccaggaaga gaagactggg gtggtgtcca       420
     caggcctgat ccacaatgga gactggacct tccagaccct ggtgatgctg gaaacagttc       480
     ctcggagtgg agaggtttac acctgccaag tggagcaccc aagcgtgaca agccctctca       540
     cagtggaatg ga                                                           552
//