Dbfetch
ID HLA01423; SV 2; standard; DNA; HUM; 3321 BP. XX AC HLA01423; XX SV HLA01423.2 XX DT 31-JAN-2001 (Rel. 1.10.0, Created, Version 1) DT 16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 2) XX DE HLA-A*11:10, Human MHC Class I sequence XX KW Human MHC; HLA; Class I; HLA-A; Allele; HLA-A*11:10; XX OS Homo Sapiens (human) OC Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates; OC Catarrhini; Hominidae; Homo. XX CC -------------------------------------------------------------------------- CC IPD-IMGT/HLA Release Version 3.55.0 CC -------------------------------------------------------------------------- CC Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative CC Commons Attribution-NoDerivs License, see; CC http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details. CC -------------------------------------------------------------------------- XX RN [1] RP 1-3321 RX PUBMED; 30117314. RA Lazaro A, Hou L, Tu B, Masaberg C, Enriquez E, Gerfen J, Kariyawasam K, RA Persaud M, Qin X, Simbulan D, Xiao Y, Xun L, Yang R, Ng J, Hurley CK; RT "Full gene HLA class I sequences of 79 novel and 519 mostly uncommon RT alleles from a large United States registry population."; RL HLA 92:304-309(2018). XX CC -------------------------------------------------------------------------- CC The sequence below is the official allele sequence as approved by the CC WHO Nomenclature Committee for Factors of the HLA System. CC Any cross references may differ from the sequence shown below. CC -------------------------------------------------------------------------- XX DR EMBL; AF329874; AF329874.1. DR EMBL; AF329875; AF329875.1. DR EMBL; AH010667; AH010667.2. DR EMBL; FJ427298; FJ427298.1. DR EMBL; MG372815; MG372815.1. XX FH Key Location/Qualifiers FH FT source 1..3321 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT /ethnic="European" FT /cell_line="BY00366" FT /cell_line="NT01610" FT /cell_line="VTIS38035" FT CDS join(119..191,322..591,833..1108,1688..1963,2066..2182, FT 2625..2657,2800..2847,3017..3021) FT /codon_start=1 FT /gene="HLA-A" FT /allele="HLA-A*11:10" FT /product="MHC Class I HLA-A*11:10 sequence" FT /translation="MAVMAPRTLLLLLSGALALTQTWAGSHSMRYFYTSVSRPGRGEPR FT FIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDRNTRNVKAQSQTDRVDLGT FT LRGYYNQSEDGSHTIQIMYGCDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMA FT AQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHE FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRY FT TCHVQHEGLPKPLTLRWELSSQPTIPIVGIIAGLVLLGAVITGAVVAAVMWRRKSSDRK FT GGSYTQAASSDSAQGSDVSLTACKV" FT UTR 1..118 FT exon 119..191 FT /number="1" FT intron 192..321 FT /number="1" FT exon 322..591 FT /number="2" FT intron 592..832 FT /number="2" FT exon 833..1108 FT /number="3" FT intron 1109..1687 FT /number="3" FT exon 1688..1963 FT /number="4" FT intron 1964..2065 FT /number="4" FT exon 2066..2182 FT /number="5" FT intron 2183..2624 FT /number="5" FT exon 2625..2657 FT /number="6" FT intron 2658..2799 FT /number="6" FT exon 2800..2847 FT /number="7" FT intron 2848..3016 FT /number="7" FT exon 3017..3021 FT /number="8" FT UTR 3022..3321 SQ Sequence 3321 BP; 637 A; 958 C; 1010 G; 716 T; 0 other; ccagttctca ctcccattgg gtgtcgggtt tccagagaag ccaatcagtg tcttcgcggt 60 cgctcttcta aagtccgcac gcacccaccg ggactcagat tctccccaga ccccgaggat 120 ggccgtcatg gcgccccgaa ccctcctcct gctactctcg ggggccctgg ccctgaccca 180 gacctgggcg ggtgagtgcg gggtcgggag ggaaaccgcc tctgcgggga gaagcaaggg 240 gccctcctgg cgggggcgca ggaccggggg agccgcgccg ggaggagggt cgggcaggtc 300 tcagccactg ctcgccccca ggctcccact ccatgaggta tttctacacc tccgtgtccc 360 ggcccggccg cggggagccc cgcttcatcg ccgtgggcta cgtggacgac acgcagttcg 420 tgcggttcga cagcgacgcc gcgagccaga ggatggagcc gcgggcgccg tggatagagc 480 aggaggggcc ggagtattgg gaccggaaca cacggaatgt gaaggcccag tcacagactg 540 accgagtgga cctggggacc ctgcgcggct actacaacca gagcgaggac ggtgagtgac 600 cccggcccgg ggcgcaggtc acgacccctc atcccccacg gacgggccag gtggcccaca 660 gtctccgggt ccgagatcca ccccgaagcc gcgggacccc gagacccttg ccccgggaga 720 ggcccaggcg cctttacccg gtttcatttt cagtttaggc caaaaatccc cccgggttgg 780 tcggggccgg gcagggcttg ggggactggg ctgaccgcgg ggtcggggcc aggttctcac 840 accatccaga taatgtatgg ctgcgacgtg gggccggacg ggcgcttcct ccgcgggtac 900 cggcaggacg cctacgacgg caaggattac atcgccctga acgaggacct gcgctcttgg 960 accgcggcgg acatggcagc tcagatcacc aagcgcaagt gggaggcggc ccatgcggcg 1020 gagcagcaga gagcctacct ggagggccgg tgcgtggagt ggctccgcag atacctggag 1080 aacgggaagg agacgctgca gcgcacgggt accaggggcc acggggcgcc tccctgatcg 1140 cctatagatc tcccgggctg gcctcccaca aggaggggag acaattggga ccaacactag 1200 aatatcaccc tccctctggt cctgagggag aggaatcctc ctgggtttcc agatcctgta 1260 ccagagagtg actctgaggt tccgccctgc tctctgacac aattaaggga taaaatctct 1320 gaaggagtga cgggaagacg atccctcgaa tactgatgag tggttccctt tgacaccggc 1380 agcagccttg ggcccgtgac ttttcctctc aggccttgtt ctctgcttca cactcaatgt 1440 gtgtgggggt ctgagtccag cacttctgag tctctcagcc tccactcagg tcaggaccag 1500 aagtcgctgt tcccttctca gggaatagaa gattatccca ggtgcctgtg tccaggctgg 1560 tgtctgggtt ctgtgctctc ttccccatcc cgggtgtcct gtccattctc aagatggcca 1620 catgcgtgct ggtggagtgt cccatgacag atgcaaaatg cctgaatttt ctgactcttc 1680 ccgtcagacc cccccaagac acatatgacc caccacccca tctctgacca tgaggccacc 1740 ctgaggtgct gggccctggg cttctaccct gcggagatca cactgacctg gcagcgggat 1800 ggggaggacc agacccagga cacggagctc gtggagacca ggcctgcagg ggatggaacc 1860 ttccagaagt gggcggctgt ggtggtgcct tctggagagg agcagagata cacctgccat 1920 gtgcagcatg agggtctgcc caagcccctc accctgagat ggggtaagga gggagatggg 1980 ggtgtcatgt ctcttaggga aagcaggagc ctctctggag acctttagca gggtcagggc 2040 ccctcacctt cccctctttt cccagagctg tcttcccagc ccaccatccc catcgtgggc 2100 atcattgctg gcctggttct ccttggagct gtgatcactg gagctgtggt cgctgccgtg 2160 atgtggagga ggaagagctc aggtggagaa ggggtgaaag gtggggtctg agatttcttg 2220 tctcactgag ggttccaagc cccagctaga aatgtgccct gtctcattac tgggaagcac 2280 cttccacaat catgggccga cccagcctgg gccctgtgtg ccagcactta ctcttttgta 2340 aagcacctgt taaaatgaag gacagattta tcaccttgat tacggcggtg atgggacctg 2400 ataccagcag tcacaagtca caggggaagg tccctgagga cagacctcag gagggctatt 2460 ggtccaggac ccacacctgc tttcttcatg tttcctgatc ccgccctggg tctgcagtca 2520 cacatttctg gaaacttctc tggggtccaa gactaggagg ttcctctagg accttaaggc 2580 cctggctcct ttctggtatc tcacaggaca ttttcttccc acagatagaa aaggagggag 2640 ttacactcag gctgcaagta agtatgaagg aggctgatgc ctgaggtcct tgggatattg 2700 tgtttgggag cccatggggg agctcaccca ccccacaatt cctcctctag ccacatcttc 2760 tgtgggatct gaccaggttc tgtttttgtt ctaccccagg cagtgacagt gcccagggct 2820 ctgatgtgtc tctcacagct tgtaaaggtg agagcttgga gggcctgatg tgtgttgggt 2880 gttgggcgga acagtggaca cagctgtgct atggggtttc tttgcattgg atgtattgag 2940 catgcgatgg gctgtttaag gtgtgacccc tcactgtgat ggatatgaat ttgttcatga 3000 atattttttt ctatagtgtg agacagctgc cttgtgtggg actgagaggc aagagttgtt 3060 cctgcccttc cctttgtgac ttgaagaacc ctgactttgt ttctgcaaag gcacctgcat 3120 gtgtctgtgt tcgtgtaggc ataatgtgag gaggtgggga gaccacccca ccccgatgtc 3180 caccatgacc ctcttcccac gctgacctgt gctccctctc caatcatctt tcctgttcca 3240 gagaggtggg gctgaggtgt ctccatctct gtctcaactt catggtgcac tgagctgtaa 3300 cttcttcctt ccctattaaa a 3321 //