Dbfetch

ID   HLA00268; SV 1; standard; DNA; HUM; 4070 BP.
XX
AC   HLA00268;
XX
SV   HLA00268.1
XX
DT   29-JUL-1993 (Rel. 1.0.0, Created, Version 1)
DT   16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 1)
XX
DE   HLA-B*38:02:01:01, Human MHC Class I sequence
XX
KW   Human MHC; HLA; Class I; HLA-B; Allele; HLA-B*38:02:01:01;
XX
OS   Homo Sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates;
OC   Catarrhini; Hominidae; Homo.
XX
CC   --------------------------------------------------------------------------
CC   IPD-IMGT/HLA Release Version 3.55.0
CC   --------------------------------------------------------------------------
CC   Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative
CC   Commons Attribution-NoDerivs License, see;
CC   http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details.
CC   --------------------------------------------------------------------------
XX
RN   [1]
RP   1-4070
RX   PUBMED; 7517584.
RA   Little AM, Domena JD, Hildebrand WH, Shen SY, Barber LD, Marsh SGE, Bias
RA   WB, Parham P;
RT   "HLA-B67: a member of the HLA-B16 family that expresses the ME1 epitope.";
RL   Tissue Antigens 43:38-43(1994).
XX
RN   [2]
RP   1-4070
RX   PUBMED; 12622774.
RA   Cox ST, McWhinnie AJ, Robinson J, Marsh SGE, Parham P, Madrigal JA, Little
RA   AM;
RT   "Cloning and sequencing full-length HLA-B and -C genes.";
RL   Tissue Antigens 61:20-48(2003).
XX
RN   [3]
RP   1-4070
RX   PUBMED; 21585707.
RA   Zhu F, He Y, Zhang W, He J, He J, Xu X, Lv H, Yan L;
RT   "Analysis for complete genomic sequence of HLA-B and HLA-C alleles in the
RT   Chinese Han population.";
RL   International Journal of Immunogenetics 38:281-284(2011).
XX
CC   --------------------------------------------------------------------------
CC   The sequence below is the official allele sequence as approved by the
CC   WHO Nomenclature Committee for Factors of the HLA System.
CC   Any cross references may differ from the sequence shown below.
CC   --------------------------------------------------------------------------
XX
DR   EMBL; AJ297317; AJ297317.1.
DR   EMBL; AJ308991; AJ308991.1.
DR   EMBL; AJ308992; AJ308992.1.
DR   EMBL; HM543711; HM543711.1.
DR   EMBL; KU319266; KU319266.1.
DR   EMBL; L22028; L22028.1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..4070
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT                   /ethnic="Asian"
FT                   /cell_line="32764"
FT                   /cell_line="KE"
FT                   /cell_line="P3618"
FT                   /cell_line="RSA-ND"
FT                   /cell_line="Terasaki EXT#58"
FT   CDS             join(285..357,486..755,1002..1277,1850..2125,2219..2335,
FT                   2777..2809,2916..2959)
FT                   /codon_start=1
FT                   /gene="HLA-B"
FT                   /allele="HLA-B*38:02:01:01"
FT                   /product="MHC Class I HLA-B*38:02:01:01 sequence"
FT                   /translation="MLVMAPRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPR
FT                   FISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQICKTNTQTYRENLRT
FT                   ALRYYNQSEAGSHTLQRMYGCDVGPDGRLLRGHNQFAYDGKDYIALNEDLSSWTAADTA
FT                   AQITQRKWEAARVAEQLRTYLEGTCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE
FT                   ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY
FT                   TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK
FT                   GGSYSQAASSDSAQGSDVSLTA"
FT   UTR             1..284
FT   exon            285..357
FT                   /number="1"
FT   intron          358..485
FT                   /number="1"
FT   exon            486..755
FT                   /number="2"
FT   intron          756..1001
FT                   /number="2"
FT   exon            1002..1277
FT                   /number="3"
FT   intron          1278..1849
FT                   /number="3"
FT   exon            1850..2125
FT                   /number="4"
FT   intron          2126..2218
FT                   /number="4"
FT   exon            2219..2335
FT                   /number="5"
FT   intron          2336..2776
FT                   /number="5"
FT   exon            2777..2809
FT                   /number="6"
FT   intron          2810..2915
FT                   /number="6"
FT   exon            2916..2959
FT                   /number="7"
FT   UTR             2960..4070
SQ   Sequence 4070 BP; 776 A; 1149 C; 1223 G; 922 T; 0 other;
     gatcaggacg aagtcccagg tcccggacgg ggctctcagg gtctcaggct ccgagggccg        60
     cgtctgcaat ggggaggcgc agcgttgggg attccccact cccctgagtt tcacttcttc       120
     tcccaacttg tgtcgggtcc ttcttccagg atactcgtga cgcatcccca cttcccactc       180
     ccattgggtg tcggatatct agagaagcca atcagcgtcg ccggggtccc agttctaaag       240
     tccccacgca cccacccgga ctcagagtct cctcagacgc cgagatgctg gtcatggcgc       300
     cccgaaccgt cctcctgctg ctctcggcgg ccctggccct gaccgagacc tgggccggtg       360
     agtgcgggtc gggagggaaa tggcctctgc cgggaggagc gaggggaccg caggcggggg       420
     cgcaggacct gaggagccgc gccgggagga gggtcgggcg ggtctcagcc cctcctcgcc       480
     cccaggctcc cactccatga ggtatttcta cacctccgtg tcccggcccg gccgcgggga       540
     gccccgcttc atctcagtgg gctacgtgga cgacacgcag ttcgtgaggt tcgacagcga       600
     cgccgcgagt ccgagagagg agccgcgggc gccgtggata gagcaggagg ggccggaata       660
     ttgggaccgg aacacacaga tctgcaagac caacacacag acttaccgag agaacctgcg       720
     caccgcgctc cgctactaca accagagcga ggccggtgag tgaccccggc ccggggcgca       780
     ggtcacgact ccccatcccc cacgtacggc ccgggtcgcc ccgagtctcc gggtccgaga       840
     tccgcctccc tgaggccgcg ggacccgccc agaccctcga ccggcgagag ccccaggcgc       900
     gtttacccgg tttcattttc agttgaggcc aaaatccccg cgggttggtc ggggcggggc       960
     ggggctcggg gggacggggc tgaccgcggg gccggggcca gggtctcaca ccctccagag      1020
     gatgtacggc tgcgacgtgg ggccggacgg gcgcctcctc cgcgggcata accagttcgc      1080
     ctacgacggc aaggattaca tcgccctgaa cgaggacctg agctcctgga ccgcggcgga      1140
     caccgcggct cagatcaccc agcgcaagtg ggaggcggcc cgtgtggcgg agcagctgag      1200
     aacctacctg gagggcacgt gcgtggagtg gctccgcaga tacctggaga acgggaagga      1260
     gacgctgcag cgcgcgggta ccaggggcag tggggagcct tccccatctc ctataggtcg      1320
     ccggggatgg cctccaacga gaagaagagg aaaatgggat cagcgctaga atgtcgccct      1380
     cccttgaatg gagaatggca tgagttttcc tgagtttcct ctgagggccc cctcttctct      1440
     ctaggacaat taagggatga cgtctctgag gaaatggagg ggaagacagt ccctagaata      1500
     ctgatcaggg gtcccctttg acccctgcag cagccttggg aaccatgact tttcctctca      1560
     ggccttgttc tctgcctcac actcagtgtg tttggggctc tgattccagc acttctgagt      1620
     cactttacct ccactcagat caggagcaga agtctctgtt ccccgctcag agactcgaac      1680
     tttccaatga atagattatc ccaggtgcct gcgtccaggc tggtgtctgg gttctgtgcc      1740
     ccttccccac cccaggtgtc ctgtccattc tcaggctggt cacatgggtg gtcctagggt      1800
     gtcccatgag agatgcaaag cgcctgaatt ttctgactct tcccatcaga ccccccaaag      1860
     acacatgtga cccaccaccc catctctgac catgaggcca ccctgaggtg ctgggccctg      1920
     ggcttctacc ctgcggagat cacactgacc tggcagcggg atggcgagga ccaaactcag      1980
     gacaccgagc ttgtggagac cagaccagca ggagacagaa ccttccagaa gtgggcagct      2040
     gtggtggtgc cttctggaga agagcagaga tacacatgcc atgtacagca tgaggggctg      2100
     ccgaagcccc tcaccctgag atggggtaag gagggggatg aggggtcata tctcttctca      2160
     gggaaagcag gagcccttca gcagggtcag ggcccctcat cttcccctcc tttcccagag      2220
     ccatcttccc agtccaccgt ccccatcgtg ggcattgttg ctggcctggc tgtcctagca      2280
     gttgtggtca tcggagctgt ggtcgctgct gtgatgtgta ggaggaagag ttcaggtagg      2340
     gaaggggtga ggggtggggt ctgggttttc ttgtcccact gggggtttca agccccaggt      2400
     agaagtgttc cctgcatcat tactgggaag cagcatgcac acaggggcta acgcagcctg      2460
     ggaccctgtg tgccagcact tactcttttg tgcagcacat gtgacaatga aggacggatg      2520
     tatcaccttg atggttgtgg tgttggggtc ctgattccag cattcatgag tcaggggaag      2580
     gtccctgcta aggacagacc ttaggagggc agttggtcca ggacccacac ttgctttcct      2640
     cgtgtttcct gatcctgccc tgggtctgta gtcatacttc tggaaattcc ttttgggtcc      2700
     aagactagga ggttcctcta agatctcatg gccctgcttc ctcccagtcc cctcacagga      2760
     cattttcttc ccacaggtgg aaaaggaggg agctactctc aggctgcgtg taagtggtgg      2820
     gggtgggagt gtggaggagc tcacccaccc cataattcct cctgtcccac gtctcctgtg      2880
     ggctctgacc aggtcctgtt tttgttctac tccagccagc gacagtgccc agggctctga      2940
     tgtgtctctc acagcttgaa aaggtgagat tcttggggtc tagagtgggc gggggggcgg      3000
     ggagggggca gaggggaaag gcctgggtaa tggagattct ttgattggga tgtttcgcgt      3060
     gtgtgatggg ctgttcagag tgtcatcact taccatgact aaccagaatt tgttcatgac      3120
     tgttgttttc tgtagcctga gacagctgtc ttgtgaggga ctgagatgca ggatttcttc      3180
     acgcctcccc tttgtgactt caagagcctc tggcatctct ttctgcaaag gcacctgaat      3240
     gtgtctgcgt ccctgttagc ataatgtgag gaggtggaga gacagcccac ccttgtgtcc      3300
     actgtgaccc ctgttcccat gctgacctgt gtttcctccc cagtcatctt tcttgttcca      3360
     gagaggtggg gctggatgtc tccatctctg tctcaacttt atgtgcactg agctgcaact      3420
     tcttacttcc ctactgaaaa taagaatctg aatataaatt tgttttctca aatatttgct      3480
     atgagaggtt gatggattaa ttaaataagt caattcctgg aatttgagag agcaaataaa      3540
     gacctgagaa ccttccagaa tctgcatgtt cgctgtgctg agtctgttgc aggtggggtg      3600
     tggagaaggc tgtggggggc caagtgtgga cggggcctgt gcccatttgg tgttgagtcc      3660
     atcatgggct ttatgtggtt agtcctcagt tgggtcacct tcactgctcc attgtccttg      3720
     tcccttcagt ggaaacttgt ccagtgggag ctgtgaccac agaggctcac acatcgccca      3780
     gggcggcccc tgcacacggg ggtctctgtg cattctgaga caaattttca gagccattca      3840
     cctcctgccc tgcttctaga gctccttttc tgctctgctc ttctgccctc tctccctgcc      3900
     ctggttctag tgatcttggt gctgaatcca atcccaactc atgaatctgt aaagcagaga      3960
     ctaatttaga cttacatttg tctgtgaaat tggacccatc atcaaggact gttctttcct      4020
     gaagggagaa cctgattgtg tgctgcagtg tgctggggca gggggtgcgg                 4070
//