Dbfetch
ID HLA00225; SV 1; standard; DNA; HUM; 4083 BP.
XX
AC HLA00225;
XX
SV HLA00225.1
XX
DT 01-JUL-1992 (Rel. 1.0.0, Created, Version 1)
DT 16-JAN-2024 (Rel. 3.55.0, Last Updated, Version 1)
XX
DE HLA-B*27:05:02:01, Human MHC Class I sequence
XX
KW Human MHC; HLA; Class I; HLA-B; Allele; HLA-B*27:05:02:01;
XX
OS Homo Sapiens (human)
OC Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates;
OC Catarrhini; Hominidae; Homo.
XX
CC --------------------------------------------------------------------------
CC IPD-IMGT/HLA Release Version 3.55.0
CC --------------------------------------------------------------------------
CC Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative
CC Commons Attribution-NoDerivs License, see;
CC http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details.
CC --------------------------------------------------------------------------
XX
RN [1]
RP 1-4083
RX PUBMED; 3912316.
RA Weiss EH, Kuon W, Dorner C, Lang M, Riethmuller G;
RT "Organization, sequence and expression of the HLA-B27 gene: a molecular
RT approach to analyze HLA and disease associations.";
RL Immunobiology 170:367-380(1985).
XX
RN [2]
RP 1-4083
RX PUBMED; 3489755.
RA Coppin HL, McDevitt HO;
RT "Absence of polymorphism between HLA-B27 genomic exon sequences isolated
RT from normal donors and ankylosing spondylitis patients.";
RL Journal of Immunology 137:2168-2172(1986).
XX
RN [3]
RP 1-4083
RX PUBMED; 3485286.
RA Szots H, Riethmuller G, Weiss E, Meo T;
RT "Complete sequence of HLA-B27 cDNA identified through the characterization
RT of structural markers unique to the HLA-A, -B, and -C allelic series.";
RL Proceedings of the National Academy of Sciences USA 83:1428-1432(1986).
XX
RN [4]
RP 1-4083
RX PUBMED; 3011411.
RA Seemann GH, Rein RS, Brown CS, Ploegh HL;
RT "Gene conversion-like mechanisms may generate polymorphism in human class I
RT genes.";
RL EMBO Journal 5:547-552(1986).
XX
RN [5]
RP 1-4083
RX PUBMED; 1589035.
RA Watkins DI, McAdam SN, Liu X, Strang CR, Milford EL, Levine CG, Garber TL,
RA Dogon AL, Lord CI, Ghim SH, Troup GM, Hughes AL, Letvin NL;
RT "New recombinant HLA-B alleles in a tribe of South American Amerindians
RT indicate rapid evolution of MHC class I loci.";
RL Nature 357:329-333(1992).
XX
RN [6]
RP 1-4083
RX PUBMED; 12622774.
RA Cox ST, McWhinnie AJ, Robinson J, Marsh SGE, Parham P, Madrigal JA, Little
RA AM;
RT "Cloning and sequencing full-length HLA-B and -C genes.";
RL Tissue Antigens 61:20-48(2003).
XX
RN [7]
RP 1-4083
RX PUBMED; 18191729.
RA Roman A, Cervera I, Head J, Rodriguez M, Martinez-Laso J;
RT "Generation of HLA-B*1516/B*1567/B*1595 and B*1571 alleles (B15 specific
RT group) by transpecies evolution.";
RL Human Immunology 68:1001-1008(2008).
XX
CC --------------------------------------------------------------------------
CC The sequence below is the official allele sequence as approved by the
CC WHO Nomenclature Committee for Factors of the HLA System.
CC Any cross references may differ from the sequence shown below.
CC --------------------------------------------------------------------------
XX
DR EMBL; AJ420238; AJ420238.1.
DR EMBL; EF203078; EF203078.1.
DR EMBL; HG794364; HG794364.1.
DR EMBL; KU319254; KU319254.1.
DR EMBL; L20086; L20086.1.
DR EMBL; M12678; M12678.1.
DR EMBL; M12967; M12967.1.
DR EMBL; M14013; M14013.1.
DR EMBL; MK953648; MK953648.1.
DR EMBL; X03665; X03665.1.
DR EMBL; X03666; X03666.1.
DR EMBL; X03945; X03945.1.
XX
FH Key Location/Qualifiers
FH
FT source 1..4083
FT /organism="Homo sapiens"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT /ethnic="European, Native American, Undefined"
FT /cell_line="1117089182"
FT /cell_line="BRUG"
FT /cell_line="BTB"
FT /cell_line="CD"
FT /cell_line="CU40B"
FT /cell_line="HC"
FT /cell_line="KCA"
FT /cell_line="LG2"
FT /cell_line="MRWC"
FT /cell_line="MVL"
FT /cell_line="MYE 2006"
FT /cell_line="ROBU072997"
FT CDS join(285..357,487..756,1001..1276,1852..2127,2221..2337,
FT 2779..2811,2918..2961)
FT /codon_start=1
FT /gene="HLA-B"
FT /allele="HLA-B*27:05:02:01"
FT /product="MHC Class I HLA-B*27:05:02:01 sequence"
FT /translation="MRVTAPRTLLLLLWGAVALTETWAGSHSMRYFHTSVSRPGRGEPR
FT FITVGYVDDTLFVRFDSDAASPREEPRAPWIEQEGPEYWDRETQICKAKAQTDREDLRT
FT LLRYYNQSEAGSHTLQNMYGCDVGPDGRLLRGYHQDAYDGKDYIALNEDLSSWTAADTA
FT AQITQRKWEAARVAEQLRAYLEGECVEWLRRYLENGKETLQRADPPKTHVTHHPISDHE
FT ATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRY
FT TCHVQHEGLPKPLTLRWEPSSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGK
FT GGSYSQAACSDSAQGSDVSLTA"
FT UTR 1..284
FT exon 285..357
FT /number="1"
FT intron 358..486
FT /number="1"
FT exon 487..756
FT /number="2"
FT intron 757..1000
FT /number="2"
FT exon 1001..1276
FT /number="3"
FT intron 1277..1851
FT /number="3"
FT exon 1852..2127
FT /number="4"
FT intron 2128..2220
FT /number="4"
FT exon 2221..2337
FT /number="5"
FT intron 2338..2778
FT /number="5"
FT exon 2779..2811
FT /number="6"
FT intron 2812..2917
FT /number="6"
FT exon 2918..2961
FT /number="7"
FT UTR 2962..4083
SQ Sequence 4083 BP; 760 A; 1151 C; 1248 G; 924 T; 0 other;
gatcaggacg aagtcccagg ccccgggcgg ggctctcagg gtctcaggct ccgagagcct 60
tgtctgcatt ggggaggcgc agcattgggg attccccact cccacgagtt tcacttcttc 120
tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180
ccattgggtg tcgggtgtct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240
tccccacgca cccacccgga ctcagaatct cctcagacgc cgagatgcgg gtcacggcgc 300
cccgaaccct cctcctgctg ctctgggggg cagtggccct gaccgagacc tgggctggtg 360
agtgcggggt cggcagggaa atggcctctg tggggaggag cgaggggacc gcaggcgggg 420
gcgcaggacc cggggagccg cgccgggagg agggtcgggc gggtctcagc ccctcctcgc 480
ccccaggctc ccactccatg aggtatttcc acacctccgt gtcccggccc ggccgcgggg 540
agccccgctt catcaccgtg ggctacgtgg acgacacgct gttcgtgagg ttcgacagcg 600
acgccgcgag tccgagagag gagccgcggg cgccgtggat agagcaggag gggccggagt 660
attgggaccg ggagacacag atctgcaagg ccaaggcaca gactgaccga gaggacctgc 720
ggaccctgct ccgctactac aaccagagcg aggccggtga gtgaccccgg cccggggcgc 780
aggtcacgac tccccatccc ccacgtacgg cccgggtcgc cccgagtctc cgggtccgag 840
atccgccccc gaggccgcgg gacccgccca gaccctcgac cggcgagagc cccaggcgcg 900
tttacccggt ttcattttca gttgaggcca aaatccccgc gggttggtcg gggcggggcg 960
gggctcgggg ggacggggct gaccgcgggg gcggggccag ggtctcacac cctccagaat 1020
atgtatggct gcgacgtggg gccggacggg cgcctcctcc gcgggtacca ccaggacgcc 1080
tacgacggca aggattacat cgccctgaac gaggacctga gctcctggac cgccgcggac 1140
acggcggctc agatcaccca gcgcaagtgg gaggcggccc gtgtggcgga gcagctgaga 1200
gcctacctgg agggcgagtg cgtggagtgg ctccgcagat acctggagaa cgggaaggag 1260
acgctgcagc gcgcgggtac caggggcagt ggggagcctt ccccatctcc tataggtcgc 1320
cggggatggc ctcccacgag aagaggagga aaatgggatc agcgctagaa tgtcgccctc 1380
ccttgaatgg agaatggcat gagttttcct gagtttcctc tgagggcccc ctcttctctc 1440
taggacaatt aagggatgac gtctctgagg aaatggaggg gaagacagtc cctagaatac 1500
tgatcagggg tcccctttga cccctgcagc agccttggga accgtgactt ttcctctcag 1560
gccttgttct ctgcctcaca ctcagtgtgt ttggggctct gattccagca cttctgagtc 1620
actttacctc cactcagatc aggagcagaa gtccctgttc cccgctcaga gactcgaact 1680
ttccaatgaa taggagatta tcccaggtgc ctgcgtccag gctggtgtct gggttctgtg 1740
ccccttcccc accccaggtg tcctgtccat tctcaggctg gtcacatggg tggtcctagg 1800
gtgtcccatg agagatgcaa agcgcctgaa ttttctgact cttcccatca gaccccccaa 1860
agacacacgt gacccaccac cccatctctg accatgaggc caccctgagg tgctgggccc 1920
tgggcttcta ccctgcggag atcacactga cctggcagcg ggatggcgag gaccaaactc 1980
aggacactga gcttgtggag accagaccag caggagatag aaccttccag aagtgggcag 2040
ctgtggtggt gccttctgga gaagagcaga gatacacatg ccatgtacag catgaggggc 2100
tgccgaagcc cctcaccctg agatggggta aggaggggga tgaggggtca tatctcttct 2160
cagggaaagc aggagccctt cagcagggtc agggcccctc atcttccctt cctttcccag 2220
agccgtcttc ccagtccacc gtccccatcg tgggcattgt tgctggcctg gctgtcctag 2280
cagttgtggt catcggagct gtggtcgctg ctgtgatgtg taggaggaag agctcaggta 2340
gggaaggggt gaggggtggg gtctgagttt tcttgtccca ctgggggttt caagccccag 2400
gtagaagtgt tccctgcctc attactggga agcagcatcc acacaggggc taacgcagcc 2460
tgggaccctg tgtgccagca cttactcttt tgtgcagcac atgtgacaat gaaggacgga 2520
tgtatcacct tggtggttgt ggtgttgggg tcctgattcc agcattcatg agtcagggga 2580
aggtccctgc taaggacaga ccttaggagg gcagttggtc caggacccac acttgctttc 2640
ctcgtgtttc ctgatcctgc cttgggtctg tagtcatact tctggaaatt ccttttgggt 2700
ccaagacgag gaggttcctc taagatctca tggccctgct tcctcccagt cccctcacag 2760
ggcattttct tcccacaggt ggaaaaggag ggagctactc tcaggctgcg tgtaagtgat 2820
gggggtggga gtgtggagga gctcacccac cccctaattc ctcctgtccc acgtctcctg 2880
cgggctctga ccaggtcctg tttttgttct actccaggca gcgacagtgc ccagggctct 2940
gatgtgtctc tcacagcttg aaaaggtgag attcttgggg tctagagtgg gtggggtggc 3000
aggtctgggg gtgggtgggg cagtggggaa aggcctgggt aatggagatt ctttgattgg 3060
gatgtttcgc gtgtgtggtg ggctgtttag actgtcatca cttaccatga ctaaccagaa 3120
tttgttcatg actgttgttt tctgtagcct gagacagctg tcttgtgagg gactgagatg 3180
caggatttct tcacgcctcc cctttgtgac ttcaagagcc tctggcatct ctttctgcaa 3240
aggcacctga atgtgtctgc gtccctgtta gcataatgtg aggaggtgga gagaccagcc 3300
cacccccgtg tccactgtga cccctgttcc catgctgacc tgtgtttcct ccccagtcat 3360
ctttcctgtt ccagagaggt ggggctggat gtctccatct ctgtctcaac tttatgtgca 3420
ctgagctgca acttcttact tccctactga aaataagaat ctgaatataa atttgttttc 3480
tcaaatattt gctatgagag gttgatggat taattaaata agtcaattcc tggaatttga 3540
gagagcaaat aaagacctga gaaccttcca gaatctgcat gttcgctgtg ctgagtctgt 3600
tgcaggtggg gtgtggagaa ggctgtgggg ggccgagtgt ggacggggcc tgtgcccatt 3660
tggtgttgag tccatcatgg gctttatgtg gttagtcctc agctgggtca ccttcactgc 3720
tccattgtcc ttgtcccttc agtggaaact tgtccagcgg gagctgtgac cacagaggct 3780
cacacatcgc cctgggcggc ccctgcacac gggggtctct gtgcattctg agacaaattt 3840
tcagagccat tcacctcttg ccctgcttct agagctcctt ttctgctctg ctctcctgcc 3900
ctctctccct gccctggttc tagtgatctt ggtgctgaat ccaatcccaa ctcatgaatc 3960
tgtaaagcag agtctaattt agacttacat ttgtctgtga aattggaccc gtcatcaagg 4020
actgttcttt cctgaagaga gaacctgatt gtgtgctgca gtgtgctggg gcagggggtg 4080
cgg 4083
//