ID U65529; SV 2; circular; genomic DNA; STD; VRL; 2583 BP. XX AC U65529; XX DT 02-NOV-1996 (Rel. 49, Created) DT 18-APR-2005 (Rel. 83, Last updated, Version 5) XX DE Cabbage leaf curl virus coat protein (AV1), replicase associated protein DE (AC3), transactivator protein (AC2), replicase associated protein (AC1) and DE AC4 genes, complete cds. XX KW . XX OS Cabbage leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2583 RA Abouzid A.M., Hiebert E., Strandberg J.O.; RT "Cloning, identification and partial sequencing of a new geminivirus RT infecting Brassicaceae"; RL Phytopathology 82:1070-1070(1992). XX RN [2] RP 1-2583 RA Abouzid A.M., Hiebert E., Strandberg J.O.; RT ; RL Submitted (30-JUL-1996) to the INSDC. RL Plant Pathology, University of Florida, 1453 Fifield Hall, PO Box 110680, RL Gainesville, FL 32611-0680, USA XX RN [3] RC Sequence update by submitter RP 1-2583 RA Abouzid A.M., Hiebert E., Strandberg J.O.; RT ; RL Submitted (09-AUG-2001) to the INSDC. RL Plant Pathology, University of Florida, 1453 Fifield Hall, PO Box 110680, RL Gainesville, FL 32611-0680, USA XX DR MD5; ff2749a57c5eb9891fe8d4457937566c. DR EuropePMC; PMC110531; 9811744. DR EuropePMC; PMC2902183; 17532021. DR EuropePMC; PMC3460622; 23028332. DR EuropePMC; PMC387707; 15078963. DR EuropePMC; PMC3921208; 24523907. DR EuropePMC; PMC5904752; 29530481. XX CC On Aug 9, 2001 this sequence version replaced gi:1655889. XX FH Key Location/Qualifiers FH FT source 1..2583 FT /organism="Cabbage leaf curl virus" FT /chromosome="A component" FT /mol_type="genomic DNA" FT /db_xref="taxon:51336" FT CDS complement(join(1567..2583,1..33)) FT /codon_start=1 FT /product="replicase associated protein" FT /function="nicking and ligase activity" FT /db_xref="GOA:Q96704" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/Swiss-Prot:Q96704" FT /protein_id="AAB17963.2" FT /translation="MPRNPKSFRLAARNIFLTYPQCDIPKDEALQMLQTLSWSVVKPTY FT IRVAREEHSDGFPHLHCLIQLSGKSNIKDARFFDITHPRRSANFHPNIQAAKDTNAVKN FT YITKDGDYCESGQYKVSGGTKANKDDVYHNAVNAGCVEEALAIIRAGDPKTFIVSYHNV FT RANIERLFTKAPEPWAPPFQLSSFTNVPDEMSSWADDYFGRSAAARAERPISIIVEGDS FT RTGKTMWARALGPHNYLSGHLDFNSKVFSNNAEYNVIDDIAPHYLKLKHWKELIGAQRD FT WQSNCKYGKPVQIKGGIPSIVLCNPGEGSSYISFLNKEENASLRAWTTKNAKFITLEAP FT LYQSTAQDC" FT CDS 339..1094 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q96701" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/Swiss-Prot:Q96701" FT /protein_id="AAB17960.1" FT /translation="MPKRDAPWRSMAGTSKVSRNANYSPRAGMIHKFDKAAAWVNRPMY FT RKPRIYRTFRSPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDITRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMEFGQVFNMFDNEPSTATV FT KNDLRDRYQVMHKFYAKVTGGQYASNEQALVKRFWKVNNYVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSITN" FT CDS complement(1091..1489) FT /codon_start=1 FT /gene="AC3" FT /product="replicase associated protein" FT /db_xref="GOA:Q96702" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/Swiss-Prot:Q96702" FT /protein_id="AAB17961.1" FT /translation="MDSRTGESITVAQAENSVFIWEVPNPLYFRIQRVEDPLYTRTRIY FT HIQVRFNHNLRKALDLRKAYFNFQVWTTSMRASGPTYLSRFKCLVMSHLDNLGVIGINH FT VIRAVRFATDRSYVTHVHENHVINFKIY" FT CDS complement(1236..1625) FT /codon_start=1 FT /gene="AC2" FT /product="transactivator protein" FT /function="transactivator for AV1 and BV1" FT /db_xref="GOA:Q96703" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/Swiss-Prot:Q96703" FT /protein_id="AAB17962.1" FT /translation="MQNSSLLKPPSIKAQHKIAKRRAVRRRRIDLNCGCSIFLHINCAD FT NGFTHRGEHHCSSGREFRFYLGGSKSPIFQDTTRRGPVVHQNQDLPHPSPVQPQPTESI FT GSPQSLLQLPSLDDFDESFWADIFK" FT CDS complement(2172..2537) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /db_xref="UniProtKB/Swiss-Prot:Q96705" FT /protein_id="AAB17964.2" FT /translation="MKLFRCFKPCRGQSSNPHTSESQERNIQTGSPIYTVSSNYQESRT FT SRMLDFSTSLTPEGLPIFTQTFRQPKTPMPSRITSPKMVIIVNPGSTRCLGVQRQIKTT FT STTTPSMRDVWKRLSQL" XX SQ Sequence 2583 BP; 668 A; 546 C; 621 G; 748 T; 0 other; tgctaaacga aacgatttag ggtttcgtgg catttttgta aataatattt aggactccag 60 gggaggacgc caggagagct ctctctaaaa cctattgttt ttggtgtctt ggtgtccaat 120 atatactaaa agcctctggg gaacaccagg ggcaaaagcg gccatccgca ataatattac 180 cggatggccg cgattttttt ggtgtcttgc gtgggaccac gcattaaatg aaatctaacc 240 aatcacatgc cgcctgacaa ggttagctat taaggctaac tgagtgcgct gtgggcctat 300 ataaagacat gtgatttcaa tttatgcttt acttcgaaat gcctaagcgg gatgccccgt 360 ggcgttctat ggcggggacc tctaaagtgt cccgcaatgc taactattca cctcgtgcag 420 gtatgatcca taaatttgat aaggccgctg cttgggttaa caggcccatg tacaggaagc 480 ccaggattta taggacgttt agaagcccag atgttcctag aggctgtgaa gggccttgca 540 aagtccagtc ttatgagcag cggcatgaca tttcccatgt tggtaaggtc atgtgtattt 600 cagacataac acgtggtaat ggtattaccc atcgtgttgg gaagcgtttt tgcgtcaagt 660 ccgtgtacat tttgggcaag atatggatgg acgagaatat caagctcaag aaccacacca 720 acagtgtcat gttttggttg gttagggaca gaagaccata tggcacccct atggagtttg 780 gccaagtgtt caacatgttc gacaacgagc ccagtactgc tactgtgaag aacgatcttc 840 gtgatcgtta tcaagtcatg cacaagtttt acgcaaaggt aaccggtggg cagtatgcga 900 gtaacgagca ggcgttggtg aagcgttttt ggaaggtcaa taactacgtt gtgtacaacc 960 atcaagaagc agggaaatac gagaatcata cggagaacgc tctgttattg tatatggcat 1020 gtactcatgc ctctaatcct gtgtatgcga cattaaaaat tcggatctat ttttacgatt 1080 cgataacaaa ttaataaatt ttgaaattta ttacatgatt ctcgtgaaca tgagttacat 1140 aagatctgtc cgttgcgaaa cgaacagctc taattacatg attaatacca ataacaccta 1200 ggttatctaa atgagacatt acaaggcatt tgaatctact taaatatgtc ggcccagaag 1260 ctctcatcga agtcgtccag acttggaagt tgaagtaggc tttgcggaga tccaatgctt 1320 tccgtaggtt gtggttgaac cggacttgga tgtggtagat cctggttctg gtgtacaacg 1380 ggtcctctac gcgttgtatc ctgaaatata ggggatttgg aacctcccag ataaaaacgg 1440 aattctctgc ctgagctaca gtgatgctct ccccggtgcg tgaatccatt atctgcgcaa 1500 ttgatgtgga ggaagataga acacccgcag ttcaaatcaa tgcgtcttcg gcgtacagct 1560 ctccttttag caatcttgtg ctgtgctttg atagaggggg gcttcaagag tgatgaattt 1620 tgcatttttg gtagtccacg ctcttagtga tgcattttcc tctttgttga ggaaacttat 1680 ataactgctc ccctctcctg gattgcacag cacgattgag ggtatgccac ctttaatttg 1740 aactggcttg ccgtacttac agtttgattg ccagtccctt tgggccccaa taagctcttt 1800 ccagtgcttt agctttagat aatgcggagc tatgtcatca atgacgttat actccgcatt 1860 atttgaaaag acctttgaat taaagtcgag gtgcccactc aaataattat gtggtcctaa 1920 agcacgcgcc cacatggtct tgccggttcg tgaatcacct tcaactatga tactaatagg 1980 tctttccgcc cgcgcagcgg cactccgacc aaaatagtca tctgcccatg aactcatctc 2040 gtccgggacg ttagtaaagg aggagagttg aaacggagga gcccatggtt ccggagcctt 2100 agtaaagagt cgctctatgt tagctctaac attatgataa ctaacaatga acgtctttgg 2160 atctccagcc cttataattg cgagagcctc ttccacacat cccgcattga cggcgttgtg 2220 gtagacgtcg tctttatttg cctttgtacc cccagacacc ttgtactgcc cggattcaca 2280 ataatcacca tctttggtga tgtaattctt gacggcattg gtgtctttgg ctgcctgaat 2340 gtttgggtga aaattggcag accttctggg gtgagtgatg tcgaaaaatc tagcatcctt 2400 gatgttcgac tttcctgata gttggatgag acagtgtaaa tgggggaacc cgtctgaatg 2460 ttcctctctt gcgactctga tgtatgtggg tttgacgact gaccacgaca gggtttgaag 2520 catctgaaga gcttcatctt tgggtatgtc gcactgggga tatgttaaga atatatttcg 2580 ggc 2583 //