ID KC706562; SV 1; circular; genomic DNA; STD; VRL; 2565 BP. XX AC KC706562; XX DT 24-MAR-2013 (Rel. 116, Created) DT 12-MAY-2013 (Rel. 116, Last updated, Version 2) XX DE Tomato chlorotic mottle virus isolate BR:Flo194:08 segment DNA-B, complete DE sequence. XX KW . XX OS Tomato chlorotic mottle virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2565 RX DOI; 10.1128/JVI.00155-13. RX PUBMED; 23487451. RA Rocha C.S., Castillo-Urquiza G.P., Lima A.T., Silva F.N., Xavier C.A., RA Hora-Junior B.T., Beserra-Junior J.E., Malta A.W., Martin D.P., Varsani A., RA Alfenas-Zerbini P., Mizubuti E.S., Zerbini F.M.; RT "Brazilian begomovirus populations are highly recombinant, rapidly RT evolving, and segregated based on geographical location"; RL J. Virol. 87(10):5784-5799(2013). XX RN [2] RP 1-2565 RA Rocha C.S., Castillo-Urquiza G.P., Lima A.T.M., Silva F.N., Xavier C.A.D., RA Hora-Junior B.T., Beserra-Junior J.E.A., Malta A.W.O., Martin D.P., RA Varsani A., Alfenas-Zerbini P., Mizubuti E.S.G., Zerbini F.M.; RT ; RL Submitted (26-FEB-2013) to the INSDC. RL Dep. de Fitopatologia, Universidade Federal de Vicosa, Av. P.H. Rolfs, s/n, RL Vicosa, MG 36570-000, Brazil XX DR MD5; 53d5575c237ac595735a19df3d5af5b0. XX CC ##Assembly-Data-START## CC Assembly Method :: DNAman v. 7 CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2565 FT /organism="Tomato chlorotic mottle virus" FT /segment="DNA-B" FT /host="Solanum lycopersicum" FT /isolate="BR:Flo194:08" FT /mol_type="genomic DNA" FT /country="Brazil" FT /collection_date="2008" FT /db_xref="taxon:172391" FT CDS 403..1221 FT /codon_start=1 FT /product="nuclear shuttle protein" FT /note="NSP" FT /db_xref="GOA:M4QN90" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:M4QN90" FT /protein_id="AGH29738.1" FT /translation="MRLIWIIIKRPVRILNMYFNTNKRRWLSTNRRNYVRYPTFKKSHS FT VVRNDGKRRLGISNKPHDDSKMSSHTIHENQYGPDFVLGHNTAISTFITYPSLGKSEPN FT RIKSYIKLKRLRFKGTVKIERVPTDLNMNGLPAKIEGVFSLVIVVDRKPHLSPSGSLYT FT FDELFGARIHSHGNLAIIPSLKDRFYIRHVAKRVLSVEKDSNMIDVAGTTTLSSRRYNC FT WANFRDFDHESCNGVYANISNNALLVYYCWMSETVSKASTFVSFDLDYIG" FT CDS complement(1312..2193) FT /codon_start=1 FT /product="movement protein" FT /note="MP" FT /db_xref="GOA:M4QLQ4" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:M4QLQ4" FT /protein_id="AGH29737.1" FT /translation="MSSQLVIPPNAFNYVESQRDEYQLSHDLTEIVLQFPSTASQISAK FT LSRSCMKIDHCVIEYRQQVPINATGTVIVEIHDKRMTDNESLQASWTFPIRCNIDLHYF FT SSSFFSLKDPIPWKLYYRVSDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILS FT KQFSDKDIDFVHVGYGTWERKLVRCASTSRFGLNCPIEIKPGESWASRSTIGLSNSCVD FT SERRNDLYPYKDLNRLDTLILDPGESASIVAAQRTQSNITLSLAQLNEIVKSTVQECIN FT TNCTPSEPKSLK" XX SQ Sequence 2565 BP; 740 A; 472 C; 519 G; 834 T; 0 other; accggatggc cgcgcgattt ttctccctct tttaatcctg tccgtccacg tgtttaatga 60 atttagttga gcgcgaattt gaagtccgtg aattgtgttg agcgctttat ttgagttccg 120 ctaacggatg accgccacgt gtattaatat aagaccgttg aattaaatat gataagcgga 180 actttctcga atttcgcatt gggtttttta ttgctgatta gttatgaaat tcgaccgtca 240 gattgcacat gatattgacg tgttgatatc gtgattgaat aatgtgtcat ttgtacaagt 300 atttgttctg ggtgcaatca taaaacatat gtaacgtgga ccaattaaat atttactata 360 taaccaagat aacccattga tgcagtcaca gctatctata taatgcgatt gatatggata 420 attataaaac gtccagtaag aattttgaac atgtatttta atactaataa gcgtcgttgg 480 ttatccacca accgtcgtaa ttacgtgcga tatcctacgt ttaaaaagtc acattctgtg 540 gtacgcaatg atgggaaacg tcgactgggt atttcaaaca agccccacga cgatagtaag 600 atgtcttcgc atacgattca tgaaaaccaa tatgggcctg actttgtatt gggccataat 660 acagcgatat ccacgtttat aacttacccc tctcttggta aaagtgagcc caatcgtatt 720 aagtcataca ttaagctgaa acgtctgcgt tttaaaggta ctgttaagat tgaacgtgtt 780 cccaccgatt tgaacatgaa tggattacct gctaagattg aaggagtatt ttctttggtt 840 attgttgtcg atcgtaaacc tcatttgagt ccttctggaa gtctctacac cttcgatgag 900 ttatttggtg ctaggatcca tagccatgga aatttagcga taatcccgtc tctgaaggat 960 cgtttttaca tacgtcatgt tgctaaacgt gtcttgtcag tggagaagga tagtaatatg 1020 attgacgttg ctgggactac aacactctct agtaggcgtt ataattgctg ggcaaatttt 1080 agagatttcg atcatgaatc ctgtaacggt gtatatgcta acataagcaa taacgcccta 1140 ctagtttatt attgttggat gtcggaaaca gtttccaaag catctacatt tgtatcattt 1200 gatcttgatt atattggata attatataga ttaactcgca aattatatat ttgataagtt 1260 aaaatatgat aataaattgt acattctgtt aaacactcag caaagcttaa tttattttaa 1320 agactttggt tcagatggag tacaattggt attaatacat tcttggactg tcgacttaac 1380 aatctcgttt aattgggcca acgataatgt aatgttggac tgcgtcctct gtgccgcaac 1440 gattgacgct gattctccgg ggtctagaat taacgtgtcc aatctgttca agtccttata 1500 tggatataga tcgttgcgcc gttcggagtc cacacatgaa ttgctgagac caattgtact 1560 tctggaggcc caggactctc caggtttaat ttctattggg cagttaagcc caaatctgga 1620 cgtcgaagcg catctgacta atttcctctc ccacgtcccg taacccacgt gaacaaaatc 1680 gatatcctta tctgaaaatt gcttcgacaa tattttaact gtcggtgccc ggaaagggat 1740 atctactgag tgttttgctg tggatagttt taacttgccc ttgaacttgg cgaaatgtgt 1800 cctttggtgc acattcgtat cgctaacccg gtagtacaat ttccaaggaa ttgggtcctt 1860 cagggaaaag aatgacgacg agaaataatg taagtctatg ttacatctaa ttgggaaggt 1920 ccatgacgcc tgcaatgact cgttgtccgt cattctcttg tcatgtattt ctactatgac 1980 ggttcctgtg gcgtttatcg ggacttgctg tctgtattcg atgacgcaat gatctatttt 2040 catgcagctc cgactgagtt tagcactaat ttgagatgcc gtagatggaa attgtaaaac 2100 aatttcagtt agatcatgag acaattgata ttcatctctt tgagactcaa cataattaaa 2160 agcatttgga gggataacca actgagaact cattataata aaaaaaggct gcgcagctga 2220 atcgataact ggaattgata agcgtaattg atatgaaccc actaagaaca atgtcaaaag 2280 acaatataat ttgtttatga tgatagtcag tactaactgg tttgtattta tagacgattt 2340 gaatcctcgg tatatacgag gaaacacttc ttagcgacgt cgttttttaa ctgaatgtat 2400 ccctatgtat tttagcaatg gcatatctgt aataatagtt gggcaccgat tggggtcttc 2460 tcaaacttac taaagcaatt ggggactggg gtcttatata tactagaacc ctctatagaa 2520 ctttcaatct cgttcacaca cgtggcggcc atccgatata atatt 2565 //