ID KC149938; SV 1; circular; genomic DNA; STD; VRL; 2748 BP. XX AC KC149938; XX DT 07-FEB-2013 (Rel. 115, Created) DT 11-MAR-2021 (Rel. 144, Last updated, Version 4) XX DE Pepper yellow leaf curl virus isolate YN65-1, complete genome. XX KW . XX OS Pepper yellow leaf curl virus OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; OC Geplafuvirales; Geminiviridae; Begomovirus. XX RN [1] RP 1-2748 RA Ruan T., Qing L.; RT ; RL Submitted (07-NOV-2012) to the INSDC. RL Plant Pathology, College of Plant Protection, Tiansheng Road 2, Chongqing RL 400716, China XX DR MD5; 9087a849c95ac83afebbd0ab3bf9fb25. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2748 FT /organism="Pepper yellow leaf curl virus" FT /host="pepper" FT /isolate="YN65-1" FT /mol_type="genomic DNA" FT /country="China" FT /collection_date="20-Jul-2010" FT /identified_by="Ling Qing" FT /db_xref="taxon:881944" FT gene 129..467 FT /gene="AV2" FT CDS 129..467 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:L7ZCI7" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:L7ZCI7" FT /protein_id="AGE12505.1" FT /translation="MWDPLLNEFPETVHGFRCMLSIKYLQLLSEGYSPDTVGFDLIREL FT ISILRARNYVEASCRYRHFYSRVEGASSSELRQPLLNPCSCPHCPRHKISKLGEQAHES FT QAQNVQDV" FT gene 289..1059 FT /gene="AV1" FT CDS 289..1059 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:L7ZAU7" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:L7ZAU7" FT /protein_id="AGE12506.1" FT /translation="MSKRPADIVISTPGSKVRRRLNFDSPYSTRAAVPTVRVTKSRSWA FT NRPMNRKPRMYRMYRSPDVPKGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGIGLTHR FT VGKRFCVKSLYFVGKIWMDENIKVKNHTNTVLFWIVRDRRPTGTPYDFQQVFNVYDNEP FT STATVKNDQRDRFQVIRRFQATVTGGQYAAKEQAIIRKFYRVNNYVVYNHQEAGKYENH FT TENALLLYMACTHASNPVYATLKVRSYFYDSVTN" FT gene complement(1056..1460) FT /gene="AC3" FT CDS complement(1056..1460) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:L7ZCJ2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:L7ZCJ2" FT /protein_id="AGE12510.1" FT /translation="MDSRTGELLTAAQAENGVYIWTVKNPLYFKILNHVNRPFTMNMDI FT ITIRIQFNYNLRRALGVHKCFLTYRIWTTLHPQIGLFLRVFKTQVLKYLNNLGVISINS FT IIRAVNHVLWKKIEQTMYVDMDSEIKFNIY" FT gene complement(1153..1605) FT /gene="AC2" FT CDS complement(1153..1605) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:L7ZC47" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:L7ZC47" FT /protein_id="AGE12508.1" FT /translation="MRSSSPSKDHCTQVPIKVQHREAKKRNRRRRVDLECGCSYFLSLN FT CFNHGFAHRGTTHCSSSREWRLYLDGQKSPLFQDPQPRQPSIHDEHGHHNNKDPIQLQP FT SESSGSAQVFSDIPNLDDLTPSDWSFLKGIQNPSPQVSKQSRCNFN" FT gene complement(1502..2593) FT /gene="AC1" FT CDS complement(1502..2593) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:L7ZE56" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:L7ZE56" FT /protein_id="AGE12507.1" FT /translation="MPRLNSFQVKAKNIFLTYPKCPIPKEQALELIQQIACPSDKLFIR FT VAQEKHKNGSLHLHVLIQFKGKAQFRNPRHFDITHPNTSTQYHPNFQGAKSSSDVKSYI FT KKDGDYINWGSFQIDGRSARGGQQTANDAAAEALNTGSVEAAMAVIREKLPKDYIFQYH FT NLKSNLDRIFTPPMEEYISPFSSSSFDQVPEELDEWAAHNVVNAAARPLRPQSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWFNVIDDVDPHFLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNTALKNWALKNAIFVTLQGPL FT YSGSNQSTAQGSEETQQEEESRS" FT gene complement(2179..2436) FT /gene="AC4" FT CDS complement(2179..2436) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:L7Z680" FT /protein_id="AGE12509.1" FT /translation="MGHCISMCSSNSKVKPSSVIPDISTSHTLIPPPNTTQTSRELSPA FT RTSSPTSKRTVITSTGVVFRSMEDLHEEVNRQLMMLLQRP" XX SQ Sequence 2748 BP; 714 A; 555 C; 635 G; 844 T; 0 other; accggatggc cgcgcaattt ttttaaaatg gaccccgcat ttgcgtatgt ccactcatgg 60 ccgctcctca aagcttattt attaaatggt cccctataaa acttaggccc caagtattta 120 cgttaaacat gtgggatcca ttattaaacg agttccccga gacggttcac gggtttcggt 180 gcatgctttc aatcaaatat cttcagttac tctctgaagg atactctcca gatacggttg 240 gtttcgatct aatacgtgag ttaatttcta ttttgcgtgc caggaattat gtcgaagcgt 300 cctgcagata tcgtcatttc tactcccggg tcgaaggtgc gtcgtcgtct gaacttcgac 360 agcccttact caacccgtgc agctgtcccc actgtccgcg tcacaaaatc tcgaagttgg 420 gcgaacaggc ccatgaatcg caagcccaga atgtacagga tgtatagaag ccctgatgtc 480 cctaagggat gtgaaggccc atgtaaggtc caatcttttg atgcgaagaa cgatattggg 540 catatgggta aggtgatctg tttgtctgac gttacccgtg gtattggact tacccatcga 600 gttggcaaac gtttctgtgt caagtcactt tatttcgttg gcaagatatg gatggatgaa 660 aatattaagg ttaagaatca cacgaacacc gttttgttct ggatagttag ggaccgacgt 720 cctactggaa cgccttatga ttttcagcag gtttttaatg tctatgataa tgagccttcc 780 acggcaactg tgaaaaacga ccagcgtgat cgtttccagg ttatcaggag gttccaggca 840 acggtgaccg gtggacaata tgcagcgaag gagcaggcga ttattagaaa gttttatcgt 900 gttaataatt atgtagtgta taatcaccag gaagctggga agtatgagaa ccatactgaa 960 aatgctttgt tattgtatat ggcatgtacc catgcctcta atcccgtgta tgctactttg 1020 aaagtcagga gttatttcta tgactcagtg acgaattaat aaatattaaa ttttatttct 1080 gaatccatgt ctacatacat agtttgttct atttttttcc ataatacatg atttacagct 1140 ctaataattg agttaattga aattacacct agattgttta gatacttgag gacttgggtt 1200 ttgaataccc ttaagaaaag accaatctga gggtgtaagg tcgtccagat tcggtatgtc 1260 agaaaacact tgtgcactcc cagagctctc cgaaggttgt agttgaattg gatccttatt 1320 gttatgatgt ccatgttcat cgtgaatgga cggttgacgt ggttgaggat cttgaaataa 1380 aggggatttt tgaccgtcca aatataaacg ccattctctg cttgagctgc agtgagtagt 1440 tcccctgtgc gcgaatccat ggttgaagca gtttaatgat agaaaataag aacacccgca 1500 ttcaagatcg actctcctcc tcctgttgcg tttcttcgct tccctgtgct gtactttgat 1560 tggaacctga gtacagtggt ccttggaggg tgacgaagat cgcattcttt agagcccaat 1620 tctttagtgc ggtgttcttt tcctcgtcga ggaattcttt ataactgctg ttgggaccag 1680 gattgcagag gaagattgtc ggtatcccgc ctttaatttg aactggcttc ccgtatttag 1740 tgtttgattg ccagtccctt tgggccccca tgaactcttt aaagtgcttg aggaagtgcg 1800 ggtcgacgtc atcaatgacg ttgaaccaag catcattact gtataccttt ggactcagat 1860 ctaaatgacc acacagatag ttgtgtgggc ctagtgacct agcccacatc gtcttcccgg 1920 ttctactatc tccctcaatg actatacttt gaggtcttaa aggccgcgca gcggcattga 1980 cgacgttatg ggccgcccat tcatcaagtt cttctggaac ttggtcaaaa gaagaagaag 2040 aaaaaggaga aatatattcc tccattggag gagtaaaaat cctatctaaa ttagatttta 2100 aattatgata ctgaaaaata taatctttcg ggagtttctc ccgaatgaca gccatagcgg 2160 cttcaacgga gcctgtgttt agggcctctg cagcagcatc attagctgtc tgttgacctc 2220 ctcgtgcaga tcttccatcg atctgaaaac taccccagtt gatgtaatca ccgtcctttt 2280 tgatgtagga cttgacgtcc gagctggact tagctccctg gaagtttggg tggtattggg 2340 tggaggtatt agggtgtgtg atgtcgaaat gtctgggatt acggaactgg gctttacctt 2400 tgaattggat gagcacatgg agatgcagtg acccattctt atgtttttct tgtgctactc 2460 gtatgaataa tttatcggat gggcatgcta tttgttggat aagttctagg gcttgctctt 2520 tcggaatggg acatttggga taagtgagaa agatattttt tgctttcact tggaatgaat 2580 taagacgagg cattttgacc gagtgaattg ggtgctctcc aaagttctat agaatggggg 2640 gctttgggtg cctatttata ccgagcaccc aaatggcaat attgtaattc ccaaacgaaa 2700 ttcaaaattc aaaattctaa atccaaaagc ggccatccgt ataatatt 2748 //