ID   KC004097; SV 1; circular; genomic DNA; STD; VRL; 2650 BP.
XX
AC   KC004097;
XX
DT   21-NOV-2012 (Rel. 114, Created)
DT   23-JAN-2013 (Rel. 115, Last updated, Version 2)
XX
DE   Macroptilium yellow spot virus isolate BR:Crb14:11 segment DNA-A, complete
DE   sequence.
XX
KW   .
XX
OS   Macroptilium yellow spot virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-2650
RX   PUBMED; 23136367.
RA   Lima A.T., Sobrinho R.R., Gonzalez-Aguilera J., Rocha C.S., Silva S.J.,
RA   Xavier C.A., Silva F.N., Duffy S., Zerbini F.M.;
RT   "Synonymous site variation due to recombination explains higher genetic
RT   variability in begomovirus populations infecting non-cultivated hosts";
RL   J. Gen. Virol. 94(Pt 2):418-431(2013).
XX
RN   [2]
RP   1-2650
RA   Lima A.T., Sobrinho R.R., Aguilera J.G., Rocha C.S., Silva S.J.,
RA   Xavier C.A., Silva F.N., Duffy S., Zerbini F.M.;
RT   ;
RL   Submitted (24-OCT-2012) to the INSDC.
RL   Dep. de Fitopatologia, Universidade Federal de Vicosa, Av. P.H. Rolfs, s/n,
RL   Vicosa, Minas Gerais 36570-000, Brazil
XX
DR   MD5; 1e804a41445c56c1e34bdd21d5bbf877.
XX
CC   ##Assembly-Data-START##
CC   Assembly Method       :: DNAMAN v. 4.0
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2650
FT                   /organism="Macroptilium yellow spot virus"
FT                   /segment="DNA-A"
FT                   /host="Phaseolus vulgaris"
FT                   /isolate="BR:Crb14:11"
FT                   /mol_type="genomic DNA"
FT                   /country="Brazil"
FT                   /collection_date="2011"
FT                   /clone="RC141"
FT                   /db_xref="taxon:1129034"
FT   CDS             223..978
FT                   /codon_start=1
FT                   /product="CP"
FT                   /note="coat protein"
FT                   /db_xref="GOA:K7WFU4"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:K7WFU4"
FT                   /protein_id="AFX60614.1"
FT                   /translation="MVKRDAPWRHMAGTSKVSRNNNFSPRGGGGPKNNRASEWVNRPMY
FT                   RKPRIYRMYRTPDVPRGCEGPCKVQSFEQRHDISHVGKVICMSDVTRGNGITHRVGKRF
FT                   CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYSSPMDFGQVFNMFDNEPSTATV
FT                   KNDLRDRFQVMHRFYAKVTGGQYASNEQAIVRRFWKVNNHVVYNHQEAGKYENHTENAL
FT                   LLYMACTHASNPVYATLKIRIYFYDSILN"
FT   CDS             complement(975..1373)
FT                   /codon_start=1
FT                   /product="REN"
FT                   /note="replication-enhancer protein"
FT                   /db_xref="GOA:K7XDM0"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:K7XDM0"
FT                   /protein_id="AFX60615.1"
FT                   /translation="MDSRTGELITAHQAESGVYIWEISNPLYFKINNVEDPLHTMTRIY
FT                   HVQIRFNHNLRKALALHKAYLNFQVWTISLTASGTTYLVRFKYLVMLYLDRIGVISLNN
FT                   VIRAVRFATDKSYVNYVLENHEIKFKFY"
FT   CDS             complement(1120..1509)
FT                   /codon_start=1
FT                   /product="TRAP"
FT                   /note="transactivating protein"
FT                   /db_xref="GOA:K7WZZ4"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:K7WZZ4"
FT                   /protein_id="AFX60617.1"
FT                   /translation="MRNSSSSTPPSIKVQHRAAKKRAIRRRRIDIDCGCSIYVHINCRG
FT                   HGFTHRGTHHCTSGREWRLYLGDIKSPLFQDQQRRGSTSHNDQNIPRPDQVQPQPEESI
FT                   GSPQGISQFPSLDNIPDSFWDDIFS"
FT   CDS             complement(1460..2506)
FT                   /codon_start=1
FT                   /product="REP"
FT                   /note="replication-associated protein"
FT                   /db_xref="GOA:K7WK91"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:K7WK91"
FT                   /protein_id="AFX60616.1"
FT                   /translation="MPLPKSFRINAKNYFLTYPQCSLTKEEALSQLLNLSVPTNKKFIK
FT                   IARELHENGQPHLHVLIQFEGKFQCKNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYV
FT                   EKDGDTIDWGEFQVDGRSARGGCQTINDTYAKALNASSAEEALQIIKEEQPQHFFLQHH
FT                   NLVANASRIFQKAPEPWVPPFHLSSFTNVPEEMQAWADDYFGRGAAARPERPISIIIEG
FT                   DSRTGKTMWARALGSHNYLSGHLDFNSKVYSNDVQYNVIDDIAPQYLKLKHWKELIGAQ
FT                   KDWQSNCKYGKPVQIKGGIPCIVLCNPGEGASYKSFLDKEENASLRQWTIHNAKFVFLN
FT                   SPLYQGST"
FT   CDS             complement(2092..2355)
FT                   /codon_start=1
FT                   /product="AC4"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:K7WMK2"
FT                   /protein_id="AFX60618.1"
FT                   /translation="MKMGSLISTSSSSSKGNSSARITDSSTWYPQPGQHISIRTFRELN
FT                   QAPMSSPTSRRTETQSIGGNFRSTEEVLEEVARRLTTHMPRR"
XX
SQ   Sequence 2650 BP; 679 A; 540 C; 614 G; 817 T; 0 other;
     accggatggc cgcgcgattt tttatgggcc ttttcttttg ggctcgttct tttggaccga        60
     gtgtatttga attaaagtca ttgttatttg aattaaagtc agttatttta tttggtccaa       120
     tgaatatgcg tctgactagc ttagataatg acaacttggt ccccaagttg gtggctaacg       180
     ggtatatatg ttaagaataa ctgactactt ctttaattca gaatggttaa gcgggacgcc       240
     ccatggcgcc acatggcagg aacctcaaag gtttcccgca ataacaactt ttctcctcgt       300
     ggaggtggag gtccaaaaaa caacagggcc tctgaatggg ttaataggcc catgtacaga       360
     aagcccagga tatatcggat gtacagaact cccgatgtgc ctagggggtg tgaaggccca       420
     tgtaaggttc agtcatttga acagcgtcac gatatatccc atgttggtaa ggttatatgt       480
     atgtctgacg tgacaagagg taatggtatt acccatcgtg taggaaaacg tttttgtgtt       540
     aagtctgtat atattctagg taagatatgg atggacgaga acatcaagtt gaagaatcac       600
     acgaacagtg tgatgttttg gttggtcaga gaccggagac cctatagctc ccctatggac       660
     tttggccaag tgttcaacat gtttgacaat gagcccagta ctgctacggt taagaacgat       720
     cttcgtgatc gttttcaagt tatgcatcga ttttatgcca aagtcactgg tggacagtat       780
     gcgagcaacg agcaagcaat tgtgaggcgt ttttggaagg tcaacaatca tgttgtctac       840
     aaccaccaag aagcagggaa atacgagaat catacggaga acgccttatt actgtatatg       900
     gcatgtactc atgcctctaa ccccgtgtat gcaaccttaa aaattcggat ctatttttat       960
     gattcgatac tcaattaata aaatttgaat tttatttcat gattctccag tacataattt      1020
     acatatgatt tgtctgttgc aaatcgaaca gctctgatta cattgttaag cgaaataaca      1080
     cctattcggt ctaagtacaa catgactaag tatttaaatc taactaaata tgtcgtccca      1140
     gaagctgtca gggatattgt ccagacttgg aaattgagat atgccttgtg gagagccaat      1200
     gctttcctca ggttgtggtt gaacctgatc tggacgtggt atattctggt cattgtgtga      1260
     agtggatcct ctacgttgtt gatcttgaaa taaaggggat ttgatatctc ccagatatag      1320
     acgccactct ctgcctgatg tgcagtgatg agttcccctg tgcgtgaatc catgtcctct      1380
     gcagttgata tggacgtata tggagcaccc gcaatctatg tcaattcgtc ttcgcctgat      1440
     tgctctcttc ttggccgctc tatgttgaac cttgatagag gggggagttg aggaagacga      1500
     atttcgcatt gtgtattgtc cactgtctaa gtgatgcgtt ttcctctttg tcgaggaatg      1560
     atttatagct ggcgccctcg ccaggattgc aaagcacaat gcatgggatt ccacctttaa      1620
     tttgaactgg cttcccgtat ttgcaatttg attgccagtc cttttgagca cctatcaatt      1680
     ctttccagtg ctttaacttt agatattgcg gtgcgatgtc atctatcacg ttatactgca      1740
     catcatttga atagaccttt gaattgaaat cgaggtgacc actcaagtaa ttatgggacc      1800
     ccaatgcacg tgcccacatg gtcttgcccg ttcgagagtc accctcgatg attatgctaa      1860
     ttggtctctc cggccgcgca gcggcacctc tcccaaaata gtcatctgcc caagcttgca      1920
     tctcctctgg gacgttagtg aacgaggaga ggtgaaacgg aggaacccac ggttctggag      1980
     ccttctggaa aatgcgagaa gcatttgcca ccaagttatg atgttggaga aagaagtgct      2040
     gtggttgctc ctctttaatt atttgcaatg cttcttctgc agaagaagcg tttaacgcct      2100
     tggcatatgt gtcgttaatc gtctggcaac ctcctctagc acttcttccg tcgacctgaa      2160
     attcccccca atcgattgtg tctccgtcct tctcgacgta ggacttgaca tcggagcttg      2220
     atttagctcc ctgaatgttc ggatggaaat gtgctgacct ggttggggat accaggtcga      2280
     agaatctgtt attcttgcac tggaatttcc cttcgaactg gatgaggacg tggagatgag      2340
     gctgcccatt ttcatgaagc tctctggcta ttttgatgaa tttcttatta gtgggaactg      2400
     ataggtttaa taattgggac agtgcttcct cttttgtaag agagcactgt ggataagtaa      2460
     ggaaataatt tttggcattt attctaaaag actttgggag tggcatattt tgtaaataag      2520
     gcttggacac cgatcggggt ctctcaactt ctgtgctatg caattggtgt ctggtgtctt      2580
     atatatacta gaaccctcaa tagaactttg aatctcaatc acccacgtgg cggccatccg      2640
     ttataatatt                                                             2650
//