ID KC004094; SV 1; circular; genomic DNA; STD; VRL; 2658 BP. XX AC KC004094; XX DT 21-NOV-2012 (Rel. 114, Created) DT 23-JAN-2013 (Rel. 115, Last updated, Version 2) XX DE Macroptilium yellow spot virus isolate BR:Crb11:11 segment DNA-A, complete DE sequence. XX KW . XX OS Macroptilium yellow spot virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2658 RX PUBMED; 23136367. RA Lima A.T., Sobrinho R.R., Gonzalez-Aguilera J., Rocha C.S., Silva S.J., RA Xavier C.A., Silva F.N., Duffy S., Zerbini F.M.; RT "Synonymous site variation due to recombination explains higher genetic RT variability in begomovirus populations infecting non-cultivated hosts"; RL J. Gen. Virol. 94(Pt 2):418-431(2013). XX RN [2] RP 1-2658 RA Lima A.T., Sobrinho R.R., Aguilera J.G., Rocha C.S., Silva S.J., RA Xavier C.A., Silva F.N., Duffy S., Zerbini F.M.; RT ; RL Submitted (24-OCT-2012) to the INSDC. RL Dep. de Fitopatologia, Universidade Federal de Vicosa, Av. P.H. Rolfs, s/n, RL Vicosa, Minas Gerais 36570-000, Brazil XX DR MD5; 880563a5239545dd956cfb6de8b62a66. XX CC ##Assembly-Data-START## CC Assembly Method :: DNAMAN v. 4.0 CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2658 FT /organism="Macroptilium yellow spot virus" FT /segment="DNA-A" FT /host="Phaseolus vulgaris" FT /isolate="BR:Crb11:11" FT /mol_type="genomic DNA" FT /country="Brazil" FT /collection_date="2011" FT /clone="RC118" FT /db_xref="taxon:1129034" FT CDS 202..957 FT /codon_start=1 FT /product="CP" FT /note="coat protein" FT /db_xref="GOA:H8ZQS4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:H8ZQS4" FT /protein_id="AFX60599.1" FT /translation="MVKRDAPWRHMAGTSKVSRNNNYSPRGGGGPKNNRASEWVNRPMY FT RKPRIYRMYRTPDVPRGCEGPCKVQSFEQRHDISHVGKVICMSDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGSPMDFGQVFNMFDNEPSTATV FT KNDLRDRFQVMHRFYAKVTGGQYASNEQAIVRRFWKVNNHVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSITN" FT CDS complement(954..1352) FT /codon_start=1 FT /product="REN" FT /note="replication-enhancer protein" FT /db_xref="GOA:K7XDI9" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:K7XDI9" FT /protein_id="AFX60600.1" FT /translation="MDSRTGELITAHQAESGVYIWEISNPLYFKMNHVEDPLYTTTRIY FT HVQIRFNHNLRRALALHKAYLNFQVWTTSLRASGTTYLVRFKYLVMLYLDRLGVVSLNN FT VIRAVRFATEKSYVNYVLENHEIKFKFY" FT CDS complement(1099..1488) FT /codon_start=1 FT /product="TRAP" FT /note="transactivating protein" FT /db_xref="GOA:K7WZW6" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:K7WZW6" FT /protein_id="AFX60602.1" FT /translation="MRNSSSSTPPSIKVQHRAAKKRAIRRRRIDIDCGCSIYVHINCRG FT HGFTHRGTHHCTSGREWRLYLGDIKSPLFQDEPRGGSTIHDNQDIPRPDQVQPQPQESI FT GSPQGISQFPSLDDIPESFWDDIFS" FT CDS complement(1439..2485) FT /codon_start=1 FT /product="REP" FT /note="replication-associated protein" FT /db_xref="GOA:K7WJY8" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:K7WJY8" FT /protein_id="AFX60601.1" FT /translation="MPPPRRFKIQSKNYFLTYPKCSISKEEALAQILGLDTPTNKKYIR FT VCRELHGNGEPHLHALLQFEGKFTCTNCRFFDLRHPSHSNVCHGKYESCKSSSDAKSYI FT EKDGDYVEWGDFQIDGRSARGGQQTVNDTYAKALNASCAEEALQIIKEEQPQHFFLQHH FT NLVANAYRIFQKAPEPWTPPFPLSSFINVPEEMKAWADDYFGRSAAARPERPISIIIEG FT DSRTGKTMWARALGSHNYLSGHLDFNSKVYSNDVQYNVIDDIAPQYLKLKHWKELIGAQ FT KDWQSNCKYGKPVQIKGGIPCIVLCNPGEGASYKSFLDKEENASLRQWTIHNAKFVFLN FT SPLYQSST" FT CDS complement(2071..2328) FT /codon_start=1 FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:H8ZQP8" FT /protein_id="AFX60603.1" FT /translation="MGSLISMLCCNSKVSSHARIADSSTCDIPVIQMFVMENTNHASHP FT PTPNHILRRTEITSNGVIFRSTDDLLEEVNRQLTIHMQRR" XX SQ Sequence 2658 BP; 701 A; 548 C; 602 G; 807 T; 0 other; accggatggc cgcgcgattt tttatgggcc ttttcttttg ggctcgttct tttggaccga 60 gtgtatttga attaaagtca gttattttat ttggtccaat gaatatgcgt ctgactagct 120 tagatattca caacttggta cccaagttgg tggctaacgg gtatatatgt taagaataac 180 tgactatttc tttaattcag aatggttaag cgggacgccc catggcgcca catggcagga 240 acctcaaagg tttcccgcaa taataactat tctcctcgtg gaggtggagg tccaaaaaac 300 aacagggcct ctgaatgggt taataggccc atgtacagaa agcccaggat atatcgtatg 360 tacagaaccc ccgatgttcc tagggggtgt gaaggcccat gtaaggttca gtcatttgaa 420 cagcgtcacg atatatccca tgttggtaag gttatatgta tgtctgacgt gacaagaggt 480 aatggtatta cccatcgtgt aggaaaacgt ttttgtgtta agtctgtata tattctaggt 540 aagatatgga tggacgagaa catcaagttg aagaatcaca cgaacagtgt gatgttttgg 600 ttggtcagag accggagacc ctatggctcc ccgatggact ttggccaagt gttcaacatg 660 tttgacaatg agcccagtac tgctacggtt aagaacgatc ttcgtgatcg ttttcaagtc 720 atgcatcgat tctatgccaa agtcactggt ggacagtatg cgagcaacga gcaagcaatt 780 gtgagacgtt tttggaaggt caacaaccat gttgtctaca accaccaaga agcagggaaa 840 tacgagaatc atacggagaa cgccttatta ctgtatatgg catgtactca tgcctctaac 900 cccgtgtatg caacattaaa aattcggatc tatttttatg attcgataac caattaataa 960 aatttgaatt ttatttcatg attctctagt acataattta catacgattt ttctgttgca 1020 aatcgaacag ctctgattac attgttaagc gaaacaacac ctaatcggtc taagtacaac 1080 atgactaagt atttaaacct aactaaatat gtcgtcccag aagctctcag ggatgtcgtc 1140 cagacttgga aattgagata tgccttgtgg agagccaatg ctctcctgag gttgtggttg 1200 aacctgatct ggacgtggta tatcctggtt gtcgtgtata gtggatcctc cacgtggttc 1260 atcttgaaat aaaggggatt tgatatctcc cagatataga cgccactctc tgcctgatgt 1320 gcagtgatga gttcccctgt gcgtgaatcc atgtcctctg cagttgatat ggacgtatat 1380 ggagcacccg caatctatgt caattcgtct tcgcctgatt gctctcttct tggccgctct 1440 atgttgaact ttgatagagg ggggagttga ggaagacgaa tttcgcattg tgtatcgtcc 1500 actgtctaag tgatgcgttt tcctctttgt cgaggaacga tttatagctg gcgccctcgc 1560 caggattgca aagcacaatg catgggattc cacctttaat ttgaactggc ttcccgtatt 1620 tgcaatttga ttgccagtcc ttttgagcac ctatcaattc tttccagtgc tttaacttta 1680 gatattgcgg tgcgatgtca tctatcacgt tgtactgcac atcatttgaa tagacctttg 1740 aattgaaatc gaggtgacca ctcaagtaat tatgggaccc caatgcacgt gcccacatgg 1800 tcttgcccgt tcgagagtca ccctcgatga ttatacttat tggtctctcc ggccgcgcag 1860 cggcacttct tccgaaatag tcatctgccc aagctttcat ctcttctggg acattaatga 1920 aagaagagag tggaaacgga ggagtccatg gctccggagc cttttgaaag atacgatatg 1980 cgttagccac aagattgtga tgttggagga agaagtgttg tggttgttcc tcctttatta 2040 tttgaagtgc ttcttcagca caagaagcat ttaacgcctt tgcatatgta tcgttaactg 2100 tctgttgacc tcctcgagca gatcgtccgt cgatctgaaa atcaccccat tcgacgtaat 2160 ctccgtcctt ctcaatatat gatttggcgt cggaggatga cttgcatgat tcgtattttc 2220 catgacaaac atttgaatga ctgggatgtc gcaagtcgaa gaatctgcaa ttcgtgcatg 2280 tgaacttacc ttcgaattgc aacaaagcat ggagatgagg ctccccattt ccgtgtaatt 2340 ctctgcatac acggatatat tttttgtttg taggtgtgtc taagcctaga atttgagcaa 2400 gtgcctcttc tttggagata gagcacttgg gataagtaag gaaataattt ttggactgaa 2460 ttttaaaacg tctgggcggt ggcatattgg taaataaaag gatgtctcca aatggcactc 2520 ttgtaaatat gggagtgtct ccaattccgc tccgctcaaa cttgctctat ctattggaga 2580 ctggagacaa tttatactag aaccctcaat agaactttca atcatgttca cacacgtggc 2640 ggccatccgt ataatatt 2658 //