ID   JX888089; SV 1; linear; genomic RNA; STD; VRL; 848 BP.
XX
AC   JX888089;
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DT   19-DEC-2012 (Rel. 115, Created)
DT   19-DEC-2012 (Rel. 115, Last updated, Version 1)
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DE   Apple chlorotic leaf spot virus isolate TJX capsid protein gene, complete
DE   cds.
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KW   .
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OS   Apple chlorotic leaf spot virus
OC   Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage;
OC   Tymovirales; Betaflexiviridae; Trivirinae; Trichovirus.
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RN   [1]
RP   1-848
RA   Ji P., Kong B., Cao K., Ma J.;
RT   "Molecular detection and variability of ACLSV isolates from apple in
RT   China";
RL   Unpublished.
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RN   [2]
RP   1-848
RA   Ji P., Kong B., Cao K., Ma J.;
RT   ;
RL   Submitted (01-OCT-2012) to the INSDC.
RL   Plant Protection College, Yunnan Agricultural University, Kunming, Yunnan
RL   650201, China
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DR   MD5; 4c0d6ca33124c3732cbcde83718417be.
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CC   ##Assembly-Data-START##
CC   Assembly Method       :: DNAMAN v. Version:5.2.9.12
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..848
FT                   /organism="Apple chlorotic leaf spot virus"
FT                   /host="apple"
FT                   /isolate="TJX"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Jul-2012"
FT                   /db_xref="taxon:12175"
FT   CDS             56..637
FT                   /codon_start=1
FT                   /product="capsid protein"
FT                   /note="CP"
FT                   /db_xref="GOA:L0CMU9"
FT                   /db_xref="InterPro:IPR008879"
FT                   /db_xref="UniProtKB/TrEMBL:L0CMU9"
FT                   /protein_id="AGA16635.1"
FT                   /translation="MAAVLNLQLKVDADLKAFLAAEGRPLHGKTGAILEQTLESIFANI
FT                   AIQGTSEQTEFLDVMVEVKSMEDQKVISTYNLKSVVDLIKAFKTTSSDPNINGMTFRQV
FT                   CEAFAPEARNGLVKLKYKGVFTNLFTTMPEVGSKYPELMFDFNKGLNMFIMNKAQQKVI
FT                   TNMNRRLLQTEFAKSENEAKLSSVTTDLCV"
XX
SQ   Sequence 848 BP; 268 A; 144 C; 204 G; 232 T; 0 other;
     gataacattt ctactagaga atttcagttt gctagacaaa gtcaggcgaa ggaggatggc        60
     ggcagttcta aatcttcagt taaaggtgga cgcagatctg aaagcgttcc tggccgcaga       120
     aggcagaccc cttcatggaa agacaggggc aatcctggaa cagacactgg agtccatctt       180
     tgcgaacata gcaatccagg ggacctcgga acagacggag ttcctggatg tgatggtgga       240
     agtgaagtca atggaggatc agaaggtgat aagtacttac aacctgaaat cggtggtgga       300
     tcttatcaag gcgttcaaga ctacatcttc ggacccgaat ataaacggga tgacgttccg       360
     ccaggtttgt gaggcctttg cccctgaggc aagaaacggg ttggtcaagc tgaagtacaa       420
     aggggttttc acgaacctct ttacgaccat gcctgaagtg ggtagtaaat acccggagct       480
     tatgttcgac tttaacaaag gtctgaatat gtttataatg aacaaggctc aacaaaaagt       540
     aataactaat atgaaccggc gtcttttgca aactgaattt gcaaaaagtg aaaatgaggc       600
     aaaactttcg tctgttacga ctgatctttg cgtttaattt gctaaagagg tttggttcta       660
     taaatagaat aaataaatag tgtgtgttta atgtgtgatt atgtttgcag ttatttacat       720
     caataatgat tatgtgcatt agcgcatcca aactctagaa cccatgagag agtataaaga       780
     gtcatggtat taaattggag tgtttagact tataataaat agcctgtaga cttttaaata       840
     ttttacta                                                                848
//