ID JX888089; SV 1; linear; genomic RNA; STD; VRL; 848 BP. XX AC JX888089; XX DT 19-DEC-2012 (Rel. 115, Created) DT 19-DEC-2012 (Rel. 115, Last updated, Version 1) XX DE Apple chlorotic leaf spot virus isolate TJX capsid protein gene, complete DE cds. XX KW . XX OS Apple chlorotic leaf spot virus OC Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; OC Tymovirales; Betaflexiviridae; Trivirinae; Trichovirus. XX RN [1] RP 1-848 RA Ji P., Kong B., Cao K., Ma J.; RT "Molecular detection and variability of ACLSV isolates from apple in RT China"; RL Unpublished. XX RN [2] RP 1-848 RA Ji P., Kong B., Cao K., Ma J.; RT ; RL Submitted (01-OCT-2012) to the INSDC. RL Plant Protection College, Yunnan Agricultural University, Kunming, Yunnan RL 650201, China XX DR MD5; 4c0d6ca33124c3732cbcde83718417be. XX CC ##Assembly-Data-START## CC Assembly Method :: DNAMAN v. Version:5.2.9.12 CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..848 FT /organism="Apple chlorotic leaf spot virus" FT /host="apple" FT /isolate="TJX" FT /mol_type="genomic RNA" FT /country="China" FT /collection_date="Jul-2012" FT /db_xref="taxon:12175" FT CDS 56..637 FT /codon_start=1 FT /product="capsid protein" FT /note="CP" FT /db_xref="GOA:L0CMU9" FT /db_xref="InterPro:IPR008879" FT /db_xref="UniProtKB/TrEMBL:L0CMU9" FT /protein_id="AGA16635.1" FT /translation="MAAVLNLQLKVDADLKAFLAAEGRPLHGKTGAILEQTLESIFANI FT AIQGTSEQTEFLDVMVEVKSMEDQKVISTYNLKSVVDLIKAFKTTSSDPNINGMTFRQV FT CEAFAPEARNGLVKLKYKGVFTNLFTTMPEVGSKYPELMFDFNKGLNMFIMNKAQQKVI FT TNMNRRLLQTEFAKSENEAKLSSVTTDLCV" XX SQ Sequence 848 BP; 268 A; 144 C; 204 G; 232 T; 0 other; gataacattt ctactagaga atttcagttt gctagacaaa gtcaggcgaa ggaggatggc 60 ggcagttcta aatcttcagt taaaggtgga cgcagatctg aaagcgttcc tggccgcaga 120 aggcagaccc cttcatggaa agacaggggc aatcctggaa cagacactgg agtccatctt 180 tgcgaacata gcaatccagg ggacctcgga acagacggag ttcctggatg tgatggtgga 240 agtgaagtca atggaggatc agaaggtgat aagtacttac aacctgaaat cggtggtgga 300 tcttatcaag gcgttcaaga ctacatcttc ggacccgaat ataaacggga tgacgttccg 360 ccaggtttgt gaggcctttg cccctgaggc aagaaacggg ttggtcaagc tgaagtacaa 420 aggggttttc acgaacctct ttacgaccat gcctgaagtg ggtagtaaat acccggagct 480 tatgttcgac tttaacaaag gtctgaatat gtttataatg aacaaggctc aacaaaaagt 540 aataactaat atgaaccggc gtcttttgca aactgaattt gcaaaaagtg aaaatgaggc 600 aaaactttcg tctgttacga ctgatctttg cgtttaattt gctaaagagg tttggttcta 660 taaatagaat aaataaatag tgtgtgttta atgtgtgatt atgtttgcag ttatttacat 720 caataatgat tatgtgcatt agcgcatcca aactctagaa cccatgagag agtataaaga 780 gtcatggtat taaattggag tgtttagact tataataaat agcctgtaga cttttaaata 840 ttttacta 848 //