ID JX219472; SV 1; circular; genomic DNA; STD; VRL; 2603 BP. XX AC JX219472; XX DT 03-SEP-2012 (Rel. 114, Created) DT 03-SEP-2012 (Rel. 114, Last updated, Version 1) XX DE Okra yellow mosaic Mexico virus - [Sida] strain Sida segment DNA-B, DE complete sequence. XX KW . XX OS Okra yellow mosaic Mexico virus - [Sida] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2603 RA Cantu-Iris M., Cardenas-Conejo Y., Mauricio-Castillo J.A., RA De la Torre-Almaraz R., Ambriz-Granados S., Arguello-Astorga G.R.; RT "New Strains of Okra Yellow Mosaic Mexico Virus Isolated from Weeds"; RL Unpublished. XX RN [2] RP 1-2603 RA Cantu-Iris M., Cardenas-Conejo Y., Mauricio-Castillo J.A., RA De la Torre-Almaraz R., Ambriz-Granados S., Arguello-Astorga G.R.; RT ; RL Submitted (22-JUN-2012) to the INSDC. RL Molecular Biology of Plants, Instituto Potosino de Investigacion Cientifica RL y Tecnologica (IPICYT), Camino a la Presa San Jose 2055. Col. Lomas 4 RL seccion, San Luis Potosi 78216, Mexico XX DR MD5; a28ed8c60817ebef2636f694b2947ab9. XX FH Key Location/Qualifiers FH FT source 1..2603 FT /organism="Okra yellow mosaic Mexico virus - [Sida]" FT /segment="DNA-B" FT /host="Sida rhombifolia" FT /strain="Sida" FT /mol_type="genomic DNA" FT /country="Mexico:Colima" FT /collected_by="Gerardo R. Arguello-Astorga" FT /collection_date="01-Jan-2010" FT /db_xref="taxon:361723" FT gene 440..1210 FT /gene="BV1" FT CDS 440..1210 FT /codon_start=1 FT /gene="BV1" FT /product="nuclear shuttle protein" FT /note="nuclear transporter; nuclear import/export of viral FT DNA; BV1; BR1; NSP" FT /db_xref="GOA:J7JVL0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:J7JVL0" FT /protein_id="AFQ60155.1" FT /translation="MYPFRYKRGPTVPSRRFYSRNHVFRRSTPFKRDDGKRRPVTVNKA FT HDEPKMSTQRIHENQYGAEFTMAHNSAISTYISYPNLGKTEPNRIRSYIKLKRLRFKGT FT VKIERVSTDVAMDGTLPNTEGVFSLVIVVDRKPHLTASGCLHTFDELFGAIIHSHGTLS FT IVPALKDRYYIRHVCKRVLSVEKDNVMVDIEGSTALSNRRFNCWASFKDLDIDSCKGVY FT DNINKNALLVYYSWVSDTVSKASSYVSYDLDYIG" FT gene complement(1248..2129) FT /gene="BC1" FT CDS complement(1248..2129) FT /codon_start=1 FT /gene="BC1" FT /product="movement protein" FT /note="plasmodesmata-associated protein, involved in virus FT cell-to-cell movement; MP; BC1; BL1" FT /db_xref="GOA:J7K297" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:J7K297" FT /protein_id="AFQ60156.1" FT /translation="MDSQLVNPPNAFNYIESHRDEYQLSHDLTEIILQFPSTASQLTAR FT LSRSCMKIDHCVIEYRRQVPINATGTVIVEIHDKRMTDNESLQASWTFPIRCNIDLHYF FT SASFFSLKDPIPWKLYYRVCDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILS FT KQFTDKDVDFSHVDYGRWERKPIRCASMSRVGLRGPIEIRPGESWASRSAVGTGHSDAD FT SEVENELHPYRHLSRLDTSVLDPGQSASIVGAQRAESNITMSMGQLNELVRTTVQECIK FT TSCNAPQPKIFK" XX SQ Sequence 2603 BP; 658 A; 569 C; 594 G; 782 T; 0 other; accggatggc cgcgcgattt ttcccccccc ccacgtggcg taatcgcgcg ctccctccct 60 ggtgctcccc tctctctcct ggtgcccccc taatacgtgg ccgctagcta ctggtgcgct 120 ctcgctacag tgggccatgt tgtcagtgaa atgtttgact gaccctttaa ttcaaattaa 180 aggttaaatc ttttatgacg cgcgatatca attcgaaatt gaattattga ttcgcgtttc 240 ctgagtatgt cccattgtac tacatggtcg acgtggccga tttgagacca tgctgctgag 300 tcaagttaag tttttatttg gaatcatcct ttctatttat tggggccgaa tcgtctatgt 360 tatttgaagt gactcagcag tccaccacgt ttatattgtt gggtatatta ttcttctgag 420 cacgtcttat ctgttaataa tgtatccttt taggtataaa cgtggtccta ctgtgccttc 480 acgacgattt tattcacgta atcacgtgtt taggcgttct acacccttca agcgagatga 540 tgggaaacgt cggcctgtta ctgttaataa ggcccatgat gagcccaaga tgtcaaccca 600 acggatccac gagaaccaat atggcgcaga atttacaatg gcccataatt cagccatttc 660 aacctatatc tcatatccga atttgggaaa gactgaaccg aaccggataa ggtcgtatat 720 caagttgaaa cgactacgtt ttaaaggtac agttaaaatt gaacgtgttt ctactgacgt 780 ggcgatggac ggtacccttc ccaacacaga aggagtgttc tcattggtca tagtcgttga 840 tcggaaacct catttgactg catctggctg cctccacacg tttgacgaac tatttggtgc 900 gataatccac agccatggaa ccttgtctat agttcccgca ttgaaggatc ggtactacat 960 acggcatgta tgtaaacggg tactgtccgt tgagaaggat aacgtgatgg tggatattga 1020 aggatccact gctctctcta acaggcgttt taattgttgg gccagtttta aagatcttga 1080 tatagattca tgtaagggtg tttatgacaa cataaacaag aacgccctgt tagtttatta 1140 ttcatgggta tctgatactg tgtctaaagc atcgagttat gtatcgtacg accttgatta 1200 tattggataa tcaataatag caagtaattt ttaaataaga acaattatta tttgaatatt 1260 tttggttgag gtgcattaca actagtcttg atacattctt ggaccgtagt cctgacgagt 1320 tcgtttaatt gtcccattga catggtaatg ttggactccg ctctctgggc ccccacaatt 1380 gaagcagact gtcccggatc taatacgctg gtatccagcc tacttaggtg cctgtacggg 1440 tggagctcgt tctccacctc tgagtccgca tctgaatgcc ccgttcccac cgcacttctg 1500 gaagcccacg attcaccagg ccttatttca attgggcctc tgagcccaac cctcgacatg 1560 gacgcgcatc tgatgggctt cctttcccat cttccgtagt cgacgtgcga gaaatccaca 1620 tccttgtcgg tgaactgttt ggaaaggatc ttcactgtcg gtgctcggaa agggatatcc 1680 accgagtgtt tcgccgtcga cagtttcagt ttccctttga atttcgcgaa gtgggtcctc 1740 tgatgaacgt tcgtatcgca aactctgtag tatagtttcc atggaattgg gtccttcaac 1800 gagaagaacg aagcggaaaa gtagtggaga tctatgttgc acctgatcgg aaaagtccac 1860 gacgcctgca gagattcgtt gtccgtcatc cttttgtcgt ggatctccac tatcactgtc 1920 cctgtggcgt tgatcggaac ctgccgcctg tattctatga cgcagtggtc gattttcatg 1980 cagctccggc taagcctcgc cgtcaactgt gacgccgtcg acgggaattg cagaattatc 2040 tcggttaggt catgagaaag ctgatactcg tcccggtgag actctatgta attaaaggcg 2100 ttcggaggat taaccaactg ggaatccata tgaagaagaa aggccgcgca gcgggaaccg 2160 attgctgaag ttgaactgcg gatgaagaaa ttagggtttg tttgtgaaaa cactcgatga 2220 actacttttg aagatgaaga aggttttatg tgtttcccag attttcactg aagaactgaa 2280 gaacagtgga tgatatttta tgaaaaagtg aattgttttt gagaaagagg agaaatctgg 2340 gaaatattct gggtaataat tatattgagg tctgttatgc ttttatagac agtcaattac 2400 aatgtttatg agcttccaga ggaagcatta ttccaggcgg tggcattttt gtaataagaa 2460 ggggtactcc aattgagctc tctcagttac tccaattgag ccccctcaaa acttgctgaa 2520 catattggag tattagagta tcttatatac tataactctc ttttacggat ttgtgacacc 2580 tggcggccat ccgctataat att 2603 //