ID   JQ911605; SV 1; linear; genomic DNA; STD; VRL; 684 BP.
XX
AC   JQ911605;
XX
DT   03-JUL-2012 (Rel. 113, Created)
DT   03-JUL-2012 (Rel. 113, Last updated, Version 1)
XX
DE   Banana streak virus isolate Borkal RNase H gene, partial cds.
XX
KW   .
XX
OS   Banana streak virus
OC   Viruses; Ortervirales; Caulimoviridae; Badnavirus.
XX
RN   [1]
RP   1-684
RA   Verma R., Datar V.V., Mungekar D.R., Gaikwad P.R.;
RT   "Detection of Cucumber Mosaic Virus and Banana Streak Virus in various
RT   genotypes of banana from Maharashtra, India";
RL   Unpublished.
XX
RN   [2]
RP   1-684
RA   Verma R., Datar V.V., Mungekar D.R., Gaikwad P.R.;
RT   ;
RL   Submitted (09-APR-2012) to the INSDC.
RL   Indian Agricultural Research Institute, Regional Station, Shivajinagar,
RL   Pune, Maharashtra 411005, India
XX
DR   MD5; 159fcd2c8745d17220d7a63b32eca280.
XX
CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..684
FT                   /organism="Banana streak virus"
FT                   /host="Musa sp. cultivar Borkal Baista (ABB)"
FT                   /isolate="Borkal"
FT                   /mol_type="genomic DNA"
FT                   /country="India:Nanded"
FT                   /collection_date="16-Dec-2011"
FT                   /db_xref="taxon:69577"
FT   CDS             <1..>684
FT                   /codon_start=3
FT                   /product="RNase H"
FT                   /db_xref="InterPro:IPR000477"
FT                   /db_xref="UniProtKB/TrEMBL:I6U5W2"
FT                   /protein_id="AFM94340.1"
FT                   /translation="TAFWAIDGLYEWLVMPFGLKNAPAIFQRKMDNCFRGTEDFIAVYI
FT                   DDILVFSETIHQHKEHLKKFMTICEKNGLVLSPTKMKIGTRQIDFLGATIGNSKIKLQP
FT                   HIIKKIIEMKDEELKEVKGLRKWLGILNYARSYIPKLGKILGPLYAKTSPNGERRMNTQ
FT                   DWKIVKEVKEVVANLPELELPPEKAIMIIETDGCMEGWGGVCKWKTDSLQPRWSEKICA
FT                   YASGK"
XX
SQ   Sequence 684 BP; 246 A; 104 C; 165 G; 169 T; 0 other;
     ggacggcatt ttgggctata gatgggctgt atgagtggct agttatgccc tttggactta        60
     aaaatgctcc tgccatattt caacgaaaaa tggacaattg ctttagaggg acagaggatt       120
     ttattgcggt atacattgat gacatactag tattctctga aacaatacac caacataaag       180
     agcatttgaa gaaatttatg acaatctgcg agaaaaatgg tttagtctta agtccgacaa       240
     aaatgaaaat tggaacaaga cagattgact tcctaggtgc aactattgga aactcaaaaa       300
     ttaagttgca gcctcatatt attaaaaaga tcatcgaaat gaaagatgaa gaactaaagg       360
     aagtgaaagg attaaggaaa tggctgggaa tccttaatta tgctaggagc tacattccga       420
     aactgggaaa aatccttgga ccactgtatg ccaaaacgag tcctaatgga gaaagaagaa       480
     tgaatactca ggactggaaa attgtcaaag aggtcaagga agttgtagct aatctgccag       540
     aacttgagtt accccccgaa aaagctatca tgataattga aacggatggc tgtatggaag       600
     gctggggagg ggtatgtaag tggaaaactg atagtctgca gccaagatgg tcagaaaaga       660
     tctgtgctta tgcgagcggg aaat                                              684
//