ID   JQ858276; SV 1; linear; genomic DNA; STD; VRL; 514 BP.
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AC   JQ858276;
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DT   19-JUN-2012 (Rel. 113, Created)
DT   19-JUN-2012 (Rel. 113, Last updated, Version 1)
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DE   Banana streak Mysore virus isolate Alpan-ABB RNase H gene, partial cds.
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KW   .
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OS   Banana streak MY virus
OC   Viruses; Ortervirales; Caulimoviridae; Badnavirus.
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RN   [1]
RP   1-514
RA   Gaikwad P.R., Verma R., Mungekar D.R., Datar V.V.;
RT   "Detection of Cucumber Mosaic Virus and Banana Streak Virus in various
RT   genotypes of banana from Maharashtra, India";
RL   Unpublished.
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RN   [2]
RP   1-514
RA   Gaikwad P.R., Verma R., Mungekar D.R., Datar V.V.;
RT   ;
RL   Submitted (28-MAR-2012) to the INSDC.
RL   Indian Agricultural Research Institute, Regional Station, Shivajinagar,
RL   Pune, Maharashtra 411005, India
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DR   MD5; a50cefaf83899d82b5b5b311e7462852.
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CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..514
FT                   /organism="Banana streak MY virus"
FT                   /host="Musa sp. ABB Alpan"
FT                   /isolate="Alpan-ABB"
FT                   /mol_type="genomic DNA"
FT                   /country="India"
FT                   /collection_date="16-Dec-2011"
FT                   /db_xref="taxon:1476909"
FT   CDS             <1..>514
FT                   /codon_start=2
FT                   /product="RNase H"
FT                   /db_xref="UniProtKB/TrEMBL:I6QMK3"
FT                   /protein_id="AFM38075.1"
FT                   /translation="TAQNKPSRVRWLMLTDFISGTGLEIKFEHINGCENILADSLSRLV
FT                   QTLLQGWQHQHLNGILLALEELYQKPNPEVAKKIGQIIMKVLEKPAGIQINMITEGPKL
FT                   RCACGKDAEIAVSHTSRNPDRPFYKCQRNLCHIWIWKDLVDDYFQNLTAWNRISEEHRR
FT                   EMAREEGQ"
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SQ   Sequence 514 BP; 171 A; 111 C; 118 G; 114 T; 0 other;
     cacagctcag aacaaaccct cccgggttag atggctcatg ctgaccgact tcatctcggg        60
     tacgggtcta gaaataaaat ttgagcatat taatggctgc gagaatatat tggcagactc       120
     cctctctaga ctagtccaaa cactgttaca aggatggcag catcaacacc taaatggaat       180
     cctactggct ctagaagaat tgtatcaaaa gcccaaccca gaagttgcga agaaaatcgg       240
     gcagatcatt atgaaggttc tggagaagcc agctggaata cagataaata tgatcactga       300
     aggacctaaa cttcggtgcg catgtggaaa agatgctgag atagctgtct cccacacttc       360
     gagaaatcct gaccgaccct tttacaaatg ccaaagaaat ctgtgccaca tttggatatg       420
     gaaagactta gtggatgact actttcaaaa cttaacggcg tggaacagaa tctctgaaga       480
     acacagaagg gaaatggctc gtgaagaagg tcag                                   514
//