ID JQ437415; SV 1; linear; genomic RNA; STD; VRL; 7253 BP. XX AC JQ437415; XX DT 10-MAY-2012 (Rel. 112, Created) DT 10-APR-2013 (Rel. 116, Last updated, Version 2) XX DE Arracacha virus B isolate PV-0082 polyprotein gene, complete cds. XX KW . XX OS Arracacha virus B OC Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; OC Picornavirales; Secoviridae; Cheravirus. XX RN [1] RP 1-7253 RX DOI; 10.1007/s00705-012-1546-x. RX PUBMED; 23192172. RA Adams I.P., Glover R., Souza-Richards R., Bennett S., Hany U., Boonham N.; RT "Complete genome sequence of arracacha virus B: a novel cheravirus"; RL Arch. Virol. 158(4):909-913(2013). XX RN [2] RP 1-7253 RA Adams I.P., Glover R., Souza-Richards R., Hany U., Boonham N.; RT ; RL Submitted (24-JAN-2012) to the INSDC. RL Food and Environment Research Agency, Sand Hutton, York YO411LZ, UK XX DR MD5; e87d430ec76d039a76544bb2a90004f2. XX CC ##Assembly-Data-START## CC Assembly Method :: Newbler v. 2.6 CC Sequencing Technology :: 454 CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..7253 FT /organism="Arracacha virus B" FT /segment="RNA1" FT /host="Oxalis tuberosa" FT /isolate="PV-0082" FT /mol_type="genomic RNA" FT /country="Peru" FT /collection_date="1981" FT /db_xref="taxon:257463" FT CDS 161..7105 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:I1X3K7" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR014759" FT /db_xref="InterPro:IPR024387" FT /db_xref="UniProtKB/TrEMBL:I1X3K7" FT /protein_id="AFI74271.1" FT /translation="MVACSLGHLAKFKFAFKGKSSISCRSCSKAYLLSTFNSSQELTGT FT LASHAKKCGVAPMAAPKSQGSICCPNCKETGLSKRQFLTSGNHCLPGYGGSQDWACSYM FT SSSERAFGATTRALNALSEVGFGSIGEVISSFNAPAPTATGWGSIDIPTEPQFFFEEYY FT SSPIGPVFQAPVDLNLLGLTLEERRSLGALYRSAIAFQVSVEEAYEASILDFYRNVPAT FT TQFVEVATPVVKELSKFERLLPLVTKVAEYFKSLEETTAPASAKVVEEVQVLPPAPIFE FT EYYSSPIGPKYICLADRDHLFDSLSWELQGVPLSSLLTDLPECFTEARHFVDKLISELL FT ALTQERYLGCWAHFNPILSEECPKLFNYGAHVALRKLLRDLADRRKRKEMKPFLRRRAD FT LQNQRFAFTCGNIDRYVGEAGFDWGITRLKKFAASWGLTSDTIAQGAADFVKKVMSLLD FT PFGNMLGAMKSFFYDSLERLKTNLLEKLKEHWLVAGIGISFIISFALLVAVACVLKLFV FT GLCSFIGLPKISFMTIWLAVFTAFLFFLGIDIITMDPHAVQAMGSSFMSFLCQTQEGGI FT VQSYMFDSGDSSATGQGPEIVFEGLTNFVNILISTVAGTCKAANAASRTLSGVSTLGGN FT VKKCASTFITSLISACQVMGNGHVHSLMIINQLVDKDFQTWSEGVRDYAFETWKAAEIP FT PIQRLEILRGLDDTRKDFEKILMMPGVNPPEYLRRCFDACSTALRERIAELSRAAMFDI FT SRIPPFWIYLYSARGGTGKSTCAIPLANKILDSANEPKGARICTRNAASSYLNGYAHQP FT CLIMDEFGAQGEHHATPDERIILDYVSATPMIPNMAAVNDKTIMFNSKLIISTSNFPNG FT NPKVDLGNNKTGFLRRRKIFAEVAAPLPGEQFPQFSFRDGTNEELPFLDLSLTPSQTQV FT WVSWHQFHAKCSEVYNNYRIQEAGVLNLYKEEEENTGIELKRRLRAYMLIRSSTFSDYS FT EVEVDAFIEKYLAFDACAWNRFVTNEDFEKWMEEYSIASVWKRDLEKMSITEIYSLLTR FT SEVSKIAASITANGDIEEGVIATSAFEYFCLKVIQAKLRTEYFTARSRSCFDVTKVEGF FT IPQMLQWLREILYQIPSWCKLVLAAALFLLVGYTIIKAAAWIFSGVAFSVAHVAAFCAF FT KGEEISPSNDATPTKKPGGAKVSWEMRMSRSDQAKFEDIGYGAARPAAGQNWADFYGEG FT PLKDNSELVSFLKHVAVMRNIVTEQDYHLLFIAGRKALFVQHVFKSMPVGTYQLIVGDC FT VIDKFFFNRDALQCKSLTDKDLCIVTMSHTVPPFAPLAKRLLFDEEEKLPRQALGFFCH FT SEPYVELDRISGISHRMQKLEQTVYENPDILYETSTGLLPLKKAYKYEMVTSPGFCGDV FT LLQVCSSGVKILGMHTTAGKQSIWRYANTVTLQDIEGAYPSEWVGEEPDLPISNTSRDF FT CAGEVARVGTNEGLKPHFPTKTSLVPSIISSDLKEDDDNHIPSVMTPAILHSRDPRIVE FT FGHEGFDPFKDGMLKYTRAAGPFDEADEDFQDALDDVFLDIGDLRTEKEIEQNQSKAIC FT RILNENDTLNGGIEQDFEDPIVSKTAEGYPFCCQRPPGKSGKGWLLGGIPGDWSLKKEG FT PLNDAIEHLEDNLANEVFEPLIGIDFPKDEKVMRAKVEVKPKVRLFTILPFHYNLVVRR FT FYLDFVARLMQKHNETPVKVGLNTSSLEWQHLYDQLSAVGFNWFNGDYSRFDGITPRCV FT LQGLAIRISKFYRQDEAQGLVSKKKIRTSVAHSLLLDMANSRYGIAGLGVYKVSSGIPS FT GFPLTVIVNSLVNSFFLHFAYRKLMSQSLKSHFWFTKNVAFAVYGDDNLVSVSESIKNV FT YNLKTIAHFLTQFGVTLKNGANKDEEILSSFYPIEGVDFLKRTFVPFRGVMLDRLNKEN FT TLERLHWVRKGTDEIDAILDNCGSCLLECIAHGPEFYEDIRSKLVRVLGKRKLPCNFPD FT FETAFTAKVNGQSFVETCRAVNVHIPPPIVYISENSYSEYLWVEGVFVCPYARRITFQT FT LYSEKGCNEKQVVCVGSMPANARRGLHINISLFDFNLLLVLRVFKMIDSKCVYFVDLEN FT NKRAALFATLYGMYIGKVDAETAVKMLVGQKCSEKQIMSWIDIVKGAKDQLKRPSTLNR FT SCLINVLCDNARFPFEEVLNFNNINTLIPRNIPIEFQSLCGQTVKEVLTEKLRQGALRI FT DNYPLVVEGSSIVVQNLISKPGIDYVGYDFQKGQTLVLEYGCARKCSPLCMGHFHVKRK FT IQQFVNTISPCDFPREAALRAAFSVAC" XX SQ Sequence 7253 BP; 1879 A; 1441 C; 1617 G; 2316 T; 0 other; gaaagcactc agttacattc caagcactct tttacaacac atctgtcttt tattctgaca 60 atcactgttc tatttgctat ttttgtaacc tcactgtttt ctttgtgtat tttcgattac 120 tatttcaacg ttttacattc tattgctttt tgttttagtt atggtagcgt gttctcttgg 180 ccacttggcc aagtttaaat ttgcctttaa aggcaaatct tctatttctt gtaggtcttg 240 ttccaaggcc tacttacttt ctaccttcaa ctcctctcag gagcttactg gtaccttggc 300 ttcacatgcc aagaaatgtg gtgttgcccc catggctgca cctaagtccc agggtagcat 360 ttgctgccca aattgcaagg agactggcct ttctaagcgc cagtttctca cttcgggaaa 420 ccattgcctc cctggttatg gggggtctca agattgggca tgttcctaca tgtccagttc 480 tgagcgcgct ttcggtgcca ccaccagagc tcttaatgct ctttctgagg tgggttttgg 540 ttccattgga gaggttattt cctctttcaa tgcaccagcc cccactgcta ctggctgggg 600 gtctattgac atccccacag agccacagtt tttttttgag gagtattact cctcccccat 660 tgggcctgtt tttcaggcac cagtggattt gaacctcttg ggtcttaccc tcgaggaacg 720 ccgttctctg ggagctcttt atcgctccgc tatagccttt caggtctctg ttgaagaggc 780 ctacgaggct tctattttgg acttctatag aaatgtccct gctaccacac agtttgtgga 840 agtagctaca cctgtagtga aagaactttc taagtttgag agactcttgc ccctggttac 900 aaaggtggca gaatatttca agtctttgga ggagactact gctcctgcat ccgccaaggt 960 tgtggaagag gttcaggttt taccacctgc tcctatcttt gaggaatatt attcctcacc 1020 tattggtccc aagtatatct gcttggctga tagggaccac ctctttgact ccctttcttg 1080 ggagttacag ggggtccctc ttagctctct tttgacggac cttcctgagt gcttcactga 1140 agctcgccac tttgtggata agcttattag tgagcttttg gctcttactc aggaacgata 1200 tttgggctgc tgggcccatt tcaatcctat tctctcagaa gagtgtccaa agctcttcaa 1260 ctatggtgca catgttgcac ttagaaaact tctgagagat cttgctgata gacggaagag 1320 gaaagaaatg aaaccctttc ttcgccggcg tgctgatcta caaaatcagc gcttcgcttt 1380 cacttgcggt aatattgatc gctatgtggg agaagctggc tttgactggg gtattacccg 1440 tctaaaaaaa tttgctgctt cctggggttt aacctcggat accatagctc aaggggctgc 1500 cgactttgtt aagaaagtta tgagtctcct ggatcccttt ggaaatatgt taggagctat 1560 gaagtccttc ttctacgatt ctcttgagcg tctgaagaca aacttgcttg agaaattgaa 1620 ggagcattgg ctagttgcag gcattggaat atcttttata atatcctttg ctttacttgt 1680 tgctgttgcc tgtgtactta aactttttgt gggcctatgt agtttcattg gtttacccaa 1740 gatttcgttt atgactatat ggttggcagt ttttactgct tttctgttct tcttgggaat 1800 cgatatcatt actatggatc cacatgctgt acaagcaatg ggttcgtctt tcatgtcttt 1860 tctgtgccag acacaggaag gcggaattgt tcaaagctat atgtttgatt ctggagactc 1920 ttcagcaaca ggacaaggac cagagatcgt ttttgaggga ttaaccaatt ttgtcaatat 1980 attaatctca acggtcgctg gtacatgtaa agcagccaat gcagcttcgc gcacactctc 2040 aggtgtgtcc actcttgggg gaaatgttaa gaaatgtgcg agcactttta taacctcctt 2100 gatttcagct tgccaggtta tgggcaatgg gcatgttcat tcacttatga ttatcaatca 2160 attagtcgac aaagactttc aaacttggtc tgagggtgtt cgtgactatg catttgaaac 2220 ctggaaagct gctgaaatcc caccaatcca aagactcgaa attttgcgtg gtcttgatga 2280 cacgcgtaag gatttcgaga agattttgat gatgccaggt gttaatccac ctgagtattt 2340 aagaaggtgc tttgatgcct gctctactgc gttaagagaa cgcattgctg aactctcgcg 2400 agctgctatg tttgatatat ctagaatacc accattctgg atctatcttt attcagcgag 2460 aggaggaact gggaagtcca catgtgctat tccattggct aataagattc ttgactctgc 2520 taatgagcct aaaggtgcta gaatttgtac gcgaaatgcg gcatctagct atttgaatgg 2580 atatgcacat cagccttgtc ttattatgga cgagtttggg gctcaggggg agcatcatgc 2640 cactcctgat gagcgaatca ttcttgatta tgtctcagcc acccctatga tcccaaatat 2700 ggctgcagta aatgataaga ccataatgtt taattctaaa cttatcattt cgacttctaa 2760 tttcccaaat gggaatccca aggttgatct tgggaataat aagacaggat ttcttcgcag 2820 gaggaaaatt ttcgctgaag ttgctgcacc cctacctggg gagcagtttc ctcaattctc 2880 ctttagggat ggtaccaatg aagaattgcc atttcttgat ctatctctaa ctccttcaca 2940 aacccaagtt tgggtttctt ggcatcaatt tcatgctaag tgttctgaag tttataacaa 3000 ttatcgaatc caggaagctg gagtccttaa tctgtacaag gaggaggaag aaaatacggg 3060 aattgagcta aagcgaagat taagagctta catgttaatt cgttcatcca cctttagtga 3120 ttattctgaa gtagaggttg acgcttttat tgaaaagtat ttggctttcg atgcctgtgc 3180 ttggaataga tttgtcacca acgaagactt tgaaaaatgg atggaggaat attctatagc 3240 ttctgtctgg aaaagagatc ttgagaagat gagtattact gaaatatact cactgctgac 3300 tcgttctgaa gtcagtaaga ttgcagcttc tattactgca aacggagata tcgaggaggg 3360 tgttattgct acatcagcct tcgaatattt ctgtttaaaa gttatccaag ccaagctgcg 3420 aactgagtat tttactgctc gatctcgatc ctgttttgat gttacgaagg ttgaaggatt 3480 catcccccag atgctacaat ggttaagaga aattctctac caaatacctt cgtggtgcaa 3540 acttgttctt gctgctgctc tgtttctttt agttggatat acaattatca aggcagctgc 3600 ttggatcttt tcaggtgtag ctttttcagt ggctcatgtt gccgctttct gtgcttttaa 3660 gggtgaagaa atttcaccgt ctaatgatgc tacgccaaca aagaaacctg ggggggctaa 3720 ggtctcctgg gaaatgcgca tgtcccggag cgatcaagct aagtttgagg atattggata 3780 tggcgcagcc cgtcctgccg cgggtcaaaa ttgggcagat ttctatggtg agggaccact 3840 aaaggacaat tctgaacttg tgtccttttt gaaacatgtt gccgttatgc ggaatattgt 3900 tacggagcaa gattaccatt tgctatttat agcaggtcgt aaggctcttt ttgtgcaaca 3960 tgttttcaag agtatgccag tgggtaccta ccaactcatt gtgggcgatt gtgttattga 4020 taaatttttt tttaatcgtg atgccctgca atgtaagagt ctcacagaca aggacctatg 4080 cattgttact atgtcgcata cagtcccacc ttttgcacca cttgctaaaa gacttctgtt 4140 tgatgaggag gaaaaattgc caagacaggc attaggcttc ttctgtcatt cggaaccata 4200 tgtggagcta gatcgaattt ctggcatttc ccacagaatg caaaaactgg agcagactgt 4260 ctatgagaat ccggatatcc tctatgaaac ttcaactgga ctcctccccc tcaagaaagc 4320 ctacaaatat gagatggtca catctccggg cttctgcgga gatgttctct tgcaagtttg 4380 ttcaagcgga gttaagattc ttggtatgca tacaactgct gggaaacaat caatttggcg 4440 ctatgcaaat accgtcacat tgcaggacat tgaaggggct tatccctcag aatgggttgg 4500 agaagaacca gatttgccca tcagtaatac ctcccgtgac ttttgtgcag gagaggttgc 4560 acgtgtagga actaatgagg gtcttaagcc tcactttccg actaaaactt ctttggtccc 4620 ctctataatc tcttctgatt taaaagagga tgatgataat cacattccga gtgtgatgac 4680 gcctgctatt ttgcatagta gggatccaag gattgttgaa ttcggtcatg aaggttttga 4740 tccctttaag gatggaatgc ttaagtatac acgggcagct ggtccttttg atgaggctga 4800 tgaagatttt caagatgctc ttgatgatgt atttcttgat attggagatc ttcgtactga 4860 gaaggaaatt gagcaaaatc aatccaaagc catttgtagg atactcaatg aaaatgacac 4920 actcaatggt ggaattgaac aggattttga agatccaatt gtctcaaaaa cagctgaggg 4980 ttatcccttt tgctgtcaaa gaccgccagg aaagtctggt aagggatggt tgttaggagg 5040 tatacctggc gactggtctt tgaagaagga aggccctctg aatgatgcta ttgagcacct 5100 tgaggataat cttgccaatg aggtttttga gcctcttatt ggcatagatt tcccaaagga 5160 tgaaaaggtt atgagggcca aagttgaagt aaagcccaaa gtcagacttt ttacaatcct 5220 tcctttccac tataacttag tggttaggag attttattta gactttgtcg ctaggctgat 5280 gcagaaacac aatgaaacac cagtcaaggt tggcttgaac actagctccc ttgaatggca 5340 gcatctatat gatcagctct cggcagtggg ttttaattgg ttcaatggag actattccag 5400 atttgatgga atcacacctc ggtgtgtctt gcaaggtctt gctattcgga tttctaaatt 5460 ctataggcag gatgaggcac agggattggt ctcaaagaaa aaaatcagga cttctgttgc 5520 acattcctta cttcttgata tggcgaattc gcgctatgga attgcaggtc ttggggttta 5580 taaggtttcg tctggaatac cttcaggctt cccgctcact gtgatagtaa atagcctggt 5640 aaattctttc ttcctccatt tcgcttatcg aaaacttatg tcacaatctc tgaaaagcca 5700 tttttggttt acaaagaacg tggcatttgc tgtttatgga gatgataatt tggtatcagt 5760 ttcagagagt attaaaaatg tttataatct caaaacaata gcccatttct taacccaatt 5820 tggggttaca cttaagaatg gagccaacaa agatgaagag atactctcgt ccttctaccc 5880 aattgaaggg gttgacttcc tgaagaggac ttttgtcccc tttagaggag tcatgctcga 5940 tcgcctgaac aaagaaaata ctcttgagcg acttcattgg gttaggaagg gcaccgatga 6000 aatagatgcc attttggata attgtggtag ctgtttactc gaatgtatag cacatggacc 6060 tgaattttat gaagacatta ggtctaagtt ggttcgggtt cttggcaaaa gaaagctacc 6120 ttgcaatttc ccagactttg aaacagcttt cacggcaaag gttaatggtc aatcctttgt 6180 ggaaacttgt cgggctgtta atgtacatat ccccccacct attgtttata tttctgagaa 6240 ttcttattct gaatacctgt gggtggaagg agtttttgtt tgtccctatg ccaggcgcat 6300 tacattccaa actctatact ctgagaaggg atgtaatgag aaacaagttg tttgtgtggg 6360 ttccatgccc gccaatgctc gcagaggact acatataaat atttctttgt ttgacttcaa 6420 tttgcttttg gttttgcgtg tttttaaaat gatagatagt aagtgtgttt attttgtaga 6480 tttggaaaat aataagcgtg ctgccctttt tgccacttta tatggtatgt acatagggaa 6540 ggtagacgct gaaactgctg ttaaaatgtt ggttgggcaa aagtgctcgg agaaacagat 6600 aatgtcctgg atagacattg tcaaaggtgc aaaagaccaa ctcaaaaggc catcaacatt 6660 aaaccgctcg tgtttgataa atgttctttg cgataacgca agatttccct tcgaggaggt 6720 cttaaatttt aacaatatca acacgctcat tccaagaaac atccccatag agtttcaatc 6780 tctctgtggg cagactgtca aagaggtcct gacggaaaaa ctacgtcagg gggctcttag 6840 gattgataac tatcccttgg ttgtagaggg tagttcaatt gttgtccaga atttaatttc 6900 taagcctggc attgactatg taggctatga tttccagaaa ggacaaactc ttgttttgga 6960 atatggttgt gctagaaagt gttctccact ttgcatgggc catttccatg tcaagagaaa 7020 gatacaacaa tttgtaaata ctatttctcc ctgtgatttt cctagggaag ctgctcttcg 7080 agcagctttt agtgttgcat gttagtcgtg tcgtttttca aataatataa tccttttagg 7140 gttttagtta gtttaaattt tctgttgctc ctgtttagca ggtcgtgcct tcagcaagca 7200 cacaaaaaca gagtgtttat tttaagttgt ttgtttagtg attcaaaaaa aaa 7253 //