ID   JQ405267; SV 1; linear; genomic RNA; STD; VRL; 1073 BP.
XX
AC   JQ405267;
XX
DT   28-FEB-2012 (Rel. 111, Created)
DT   28-FEB-2012 (Rel. 111, Last updated, Version 1)
XX
DE   Alternanthera mosaic virus clone NAN10 TGB2 gene, partial cds; and TGB3 and
DE   coat protein genes, complete cds.
XX
KW   .
XX
OS   Alternanthera mosaic virus
OC   Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus.
XX
RN   [1]
RP   1-1073
RA   Hammond J., Reinsel M.D.;
RT   "Variability of Alternanthera Mosaic Virus Isolates";
RL   Unpublished.
XX
RN   [2]
RP   1-1073
RA   Hammond J., Reinsel M.D.;
RT   ;
RL   Submitted (11-JAN-2012) to the INSDC.
RL   Floral and Nursery Plants Research Unit, U.S. Dept. of Agriculture, 10300
RL   Baltimore Avenue, Beltsville, MD 20705, USA
XX
DR   MD5; 038208aa830a39912567cf4e99ecb4bd.
DR   EuropePMC; PMC3560364; 23386854.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1073
FT                   /organism="Alternanthera mosaic virus"
FT                   /host="Nandina domestica"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /collection_date="2009"
FT                   /clone="NAN10"
FT                   /db_xref="taxon:85454"
FT   CDS             <1..153
FT                   /codon_start=1
FT                   /product="TGB2"
FT                   /db_xref="GOA:H6X104"
FT                   /db_xref="UniProtKB/TrEMBL:H6X104"
FT                   /protein_id="AFB81322.1"
FT                   /translation="SIHYNSPRAQSQISGALPFLIILILSALIYALSCRGGHHRARLHR
FT                   CPCCS"
FT   CDS             89..280
FT                   /codon_start=1
FT                   /product="TGB3"
FT                   /db_xref="InterPro:IPR003411"
FT                   /db_xref="UniProtKB/TrEMBL:H6X105"
FT                   /protein_id="AFB81323.1"
FT                   /translation="MPYLVEAAITVLACIGVLAALRPGFHPCTILLTGHSATISGDCGP
FT                   VAPETIRALGDYLTGLRF"
FT   CDS             324..947
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:H6X106"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:H6X106"
FT                   /protein_id="AFB81324.1"
FT                   /translation="MSTPFPQVTQEQMNAFTPHATSNLLPSPEQLTTIASLLVAAKVPA
FT                   ASTTTIALELVNFCYDNGSSTYTVVVGPSSLAEVSLSQVANIVKASGTSLRKFCRFFAP
FT                   IIWNLRTDKTPPANWEANGFKPTEKFAAFDFFDGVENPAAMQPPGGLVRTPSQAERIAN
FT                   ATNKQVNLFQAAAQDNNFASNSAFITKGQLSSNSPTIQYLPPPE"
FT   3'UTR           948..1073
XX
SQ   Sequence 1073 BP; 258 A; 325 C; 219 G; 271 T; 0 other;
     agcatccact acaattcgcc tagggcccag agtcagatct caggcgcatt accgttcctg        60
     atcatcctga tactctcagc cctcatctat gccctatctt gtagaggcgg ccatcaccgt       120
     gctcgcttgc ataggtgtcc ttgctgctct taggccaggg ttccatccct gcacaattct       180
     gctaactgga cactctgcga ccattagcgg agattgcgga cccgtcgcac cagagaccat       240
     cagggctctt ggagattatt taaccgggct taggttttag cattagtttg aatatcctat       300
     tcttatctta gttaaaaatc atcatgtcta caccatttcc tcaagtcact caggaacaga       360
     tgaacgcgtt cactccacac gccacatcca atctccttcc atcaccggag cagttgacca       420
     ccattgccag tctcttggtt gccgccaagg tgcctgccgc ctcaacaaca accattgccc       480
     tggaacttgt caacttctgt tatgacaatg gctccagtac ctacacagtg gtggtgggcc       540
     cttcgtcact tgcagaggtc tcactttccc aggttgctaa catcgtcaaa gcctcaggca       600
     cctctctccg caaattctgc agattctttg ccccaatcat ctggaacctc agaacagaca       660
     agacgccccc agccaactgg gaagccaatg ggttcaaacc aacagagaag tttgcagcct       720
     tcgatttctt cgacggagtg gagaatccgg cggccatgca gccaccggga gggttggtta       780
     ggactcctag ccaagcagaa agaatcgcca acgccactaa caagcaggtg aacctctttc       840
     aggccgcggc acaggacaac aactttgcca gcaactctgc attcatcacc aagggtcaac       900
     tgtcctccaa ctcaccaacc attcaatatc tcccaccacc tgagtgattt ctccatccag       960
     tccaagcccg ttgttttcgc aattttgttg gggctatcga gttttcaaaa ttgctttcgc      1020
     ttctgtagac ctaaattaca gcctagtgtg cggtttaata cctatttacg cac             1073
//