ID   JQ045704; SV 1; linear; genomic DNA; STD; VRL; 1177 BP.
XX
AC   JQ045704;
XX
DT   23-DEC-2012 (Rel. 115, Created)
DT   23-DEC-2012 (Rel. 115, Last updated, Version 1)
XX
DE   Tomato begomovirus Colombia isolate Cepita66/Santander/2009
DE   replication-associated protein (AC1) and coat protein (AV1) genes, partial
DE   cds.
XX
KW   .
XX
OS   Tomato begomovirus Colombia
OC   Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus.
XX
RN   [1]
RP   1-1177
RA   Lopez-Lopez K., Betancurt-Perez J.F., Vaca-Vaca J.C.;
RT   "Distribution and genetic diversity of tomato-infecting begomovirus in
RT   Colombia";
RL   Unpublished.
XX
RN   [2]
RP   1-1177
RA   Lopez-Lopez K., Betancurt-Perez J.F., Vaca-Vaca J.C.;
RT   ;
RL   Submitted (21-NOV-2011) to the INSDC.
RL   Facultad de Ciencias Agropecuarias, Universidad Nacional de Colombia,
RL   Carrera 32 via Candelaria, Palmira, Valle 000, Colombia
XX
DR   MD5; 59b777e644084756b3e4b4be6bbca6b9.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1177
FT                   /organism="Tomato begomovirus Colombia"
FT                   /host="Solanum lycopersicum"
FT                   /isolate="Cepita66/Santander/2009"
FT                   /mol_type="genomic DNA"
FT                   /country="Colombia"
FT                   /collected_by="K Lopez-Lopez & JC Vaca-Vaca"
FT                   /collection_date="01-Apr-2009"
FT                   /db_xref="taxon:1234417"
FT   gene            complement(<1..700)
FT                   /gene="AC1"
FT   CDS             complement(<1..700)
FT                   /codon_start=1
FT                   /gene="AC1"
FT                   /product="replication-associated protein"
FT                   /note="Rep"
FT                   /db_xref="GOA:K9M8N5"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:K9M8N5"
FT                   /protein_id="AFS42024.1"
FT                   /translation="MPPPRKFRVNSKNYFLTYPQCSLTKEEALSQIQSLSIPVNKKFIK
FT                   ICRELHENGEPHLHVLIQFEGKYQCTNNRLFDLVSPTRSAHFHPNIQGAKSSSDVKSYL
FT                   DKDGDTIEWGQFQIDGRSARGGQQSVNDTYAKALNAGSAEAALQIIKEEQPQHFFLQHH
FT                   NLVANAARIFQKAPEPWVPPFPLSSFTNVPDEMKEWADDYFGRGAAARPDRPISIIIEG
FT                   DSRTGKTMWAC"
FT   gene            1030..>1177
FT                   /gene="AV1"
FT   CDS             1030..>1177
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /db_xref="GOA:K9M8P6"
FT                   /db_xref="UniProtKB/TrEMBL:K9M8P6"
FT                   /protein_id="AFS42023.1"
FT                   /translation="MPKRDAPWRSMAGTSKVSRNANYSPRSGIGPRINKAAEWVNRPMY
FT                   RKPC"
XX
SQ   Sequence 1177 BP; 287 A; 257 C; 280 G; 353 T; 0 other;
     tgcaggccca catcgtcttt ccagttcgag agtcaccttc aattatgata ctaataggtc        60
     tatctggccg cgcagcggca ccccttccaa aataatcgtc tgcccactct ttcatctcgt       120
     caggaacgtt agtgaaggaa gagaggggaa acggagggac ccatggttcc ggagcctttt       180
     ggaatattct agctgcgtta gcgaccagat tgtgatgttg aaggaagaaa tgttgcggtt       240
     gttcttcctt tattatttgc agagctgctt ctgcggaccc agcatttaac gccttggcgt       300
     atgtgtcgtt aaccgactgc tgacctcctc gagcagatct gccgtcaatc tggaattgtc       360
     cccattcaat cgtatctcca tctttgtcga ggtaggactt gacgtcggag ctcgatttag       420
     ctccctgaat gttcggatgg aaatgtgctg acctggttgg ggagaccaga tcgaagagtc       480
     tattattcgt gcactggtat ttcccttcga actggataag aacgtggaga tgaggttccc       540
     cattttcgtg aagctctctg cagatcttga tgaatttctt gttgactggg attgaaagac       600
     tttgaatttg ggaaagtgcc tcttcttttg taagagagca ctgtggataa gtgaggaaat       660
     agtttttaga gttaactcta aatttcctag gcggtggcat ttttgtaata agagcttgta       720
     caccgattga gctctctcaa acttgctctt tcaatcggtg tattggggta acttatatac       780
     tagaaccctc aatctcggaa ttaatggatt tgcaacacgt ggcagccatc cgtataatat       840
     taccggatgg ccgcgcgatt ttttatattg ggccgcgctt ttttctttta tgggccttat       900
     atgtaatggg ctttaattta gcccaatcat agttcgtctg acaaacctag ataagtggaa       960
     ttactttggc gctaagatgt tcctttgtct ataaattaaa gcctcttggc ccactatctt      1020
     taactcaaaa tgcctaagcg cgatgcccca tggcgttcaa tggcgggaac ctcaaaggtt      1080
     agccgcaacg ctaattactc tcctcgctca ggaattgggc caagaataaa taaggccgct      1140
     gaatgggtaa acaggcccat gtataggaag ccctgca                               1177
//