ID JN819511; SV 1; linear; genomic RNA; STD; VRL; 4580 BP. XX AC JN819511; XX DT 01-OCT-2012 (Rel. 114, Created) DT 16-JUL-2013 (Rel. 117, Last updated, Version 2) XX DE Saccharomyces cerevisiae virus L-A-lus gag-pol fusion protein and coat DE protein genes, complete cds. XX KW . XX OS Saccharomyces cerevisiae virus L-A-lus OC Viruses; Riboviria; Totiviridae; Totivirus. XX RN [1] RP 1-4580 RX DOI; 10.1128/AEM.00500-13. RX PUBMED; 23728812. RA Rodriguez-Cousino N., Gomez P., Esteban R.; RT "L-A-lus, a New Variant of the L-A Totivirus Found in Wine Yeasts with Klus RT Killer Toxin-Encoding Mlus Double-Stranded RNA: Possible Role of Killer RT Toxin-Encoding Satellite RNAs in the Evolution of Their Helper Viruses"; RL Appl. Environ. Microbiol. 79(15):4661-4674(2013). XX RN [2] RP 1-4580 RA Esteban R., Rodriguez-Cousino N.; RT ; RL Submitted (06-OCT-2011) to the INSDC. RL Instituto de Biologia Funcional y Genomica. CSIC, Avda. del Campo Charro RL s/n, Salamanca 37007, Spain XX DR MD5; bbc1dffc854df24455a7c2a2a165db64. DR EuropePMC; PMC3719527; 23728812. DR EuropePMC; PMC4911473; 27313294. DR EuropePMC; PMC5053509; 27711183. DR EuropePMC; PMC6213463; 30332789. XX FH Key Location/Qualifiers FH FT source 1..4580 FT /organism="Saccharomyces cerevisiae virus L-A-lus" FT /host="Saccharomyces cerevisiae wine strain EX229" FT /mol_type="genomic RNA" FT /country="Spain" FT /collection_date="2005" FT /db_xref="taxon:1226531" FT CDS join(30..1961,1961..4546) FT /codon_start=1 FT /ribosomal_slippage FT /product="gag-pol fusion protein" FT /db_xref="GOA:J9QMW3" FT /db_xref="InterPro:IPR001795" FT /db_xref="InterPro:IPR015302" FT /db_xref="InterPro:IPR036332" FT /db_xref="UniProtKB/TrEMBL:J9QMW3" FT /protein_id="AFQ55381.1" FT /translation="MLRFVTKNSQDKSSDLFSICSDKGTFVAHNRVRTDFKFDNLVFNR FT VYGVSQKFTLVGNPKVCFNEGSSYLEGIAKKYLTLDGGLAIDNILNELKSTCGIPGNAV FT ASHAYNITSWRWYDNHVALLMNMLRAYHLQVLSEQGQYSAGSYPMYHDGHVKIKLDTPI FT SEDDAPDSFKWPSDRTTDTYPDWAQFSESFPSIDVPYLDVRPLTVTEVNFVLMMMSKWH FT RRTNLAIDYEAPALADKFAYRHAITVQDADEWIEGDRTDDQFRPPSSKVMMSALRKYVN FT HNRLYNQFYTAAQLLAQIMMKPVPNCAEGYAWLMHDALVNLPKFGSVRGRYPFLLAGDA FT ALIQATALEDWSAIMAKPELIFTYAMQVAVALNTGLYLRRVKKTGFGTTVDDSYEDGAF FT LQPETFVQAAIACCTGQDAPLNGMSDVYVTYPDLLEFDTITRVPVTVLEPEGYNIQDGA FT LEVTGVPIACSPYMIFPVAAFDEANPYSGSFVIKPALKYLRKGALYAKLEAWKLAWAMR FT IAGYDTEFKACGNTHGLSKFYADNSDSWTHIPEFVSDEEVTEVYVTNIERRARHFVELP FT RLNSPAFFKPVEVSTAIYDTYVQAGTFSVYHASRINLDYVKPVSAGIQVINAGELRNYW FT GSVRRTQQGFRSGRSYDASRNAYRRTYSWHCPRRLDRTDGKCFSRVNIIEPSHGPRPMR FT YILNEPNTYPAWIRFRNRVQAVSRQRATHFLFDIVPASKIADYTTSQTATFAYRSHTYA FT CTVTALRFGDDYGLYVQVEANMTLLSPAARRQASATYSQVEGFCFNTPTVMDTLANILD FT VDRNIRPKHFKGLRTYERSKVTAQHHTHLRPDEVLEAAARVSPRRKYYLLCVVELLAAC FT EVNIEAAVATIMTYVLTLDEKFIPLFLDSRTIWQGSKGPEELTARLKKASGQIKSVHTA FT DYEPLTELFELAVLMNRGVGHVSWKTEREHRENPDVANVNQQALYACVRDMFEGAKQTY FT DYPYMTWDDYTSSRWEWVPGGSVHSQYSEDDEYIFPGQYTRNKFITVNKMPKHKIARMI FT ASTPEVRAWTSTKYEWGKQRAIYGTDLRSTLITNFAMFRCEDVLTHKFPVGDQAEAAKV FT HKRVNMMLDGASSFCFDYDDFNSQHSISSMYTVLCAFRDAFTRNMSIEQREAMDWVCES FT VKHMWVLDPDTKTWYQLKGTLLSGWRLTTFMNTVLNWAYKKLAGVFDLDDVQDSVHNGD FT DVMISLNRVSTAVRIMDAMHRINARAQPAKCNLFSISEFLRVEHGMSGGDGLGAQYLSR FT SCATLVHSRIESNEPLSVVRVMEADKTRLRDLANRTNIKASVTEIEEQLDRRVTSIFKV FT DREVVKAISTAHRVCGGISTDPWAPVTTKIKTDNEAYEIPYEIDDPSFWPGVNDYAYKV FT WQNFGERLEFNKIKDAVSKGSRNTIALKRKAKISAVKNDFVNKSEWERTMYKAYKGLAV FT SYYANLSKFMSIPPMANIEFGQARFAMQAALDSSDPLRALQIFL" FT CDS 30..2072 FT /codon_start=1 FT /product="coat protein" FT /note="major virion coat protein" FT /db_xref="GOA:J9QPI6" FT /db_xref="InterPro:IPR015302" FT /db_xref="InterPro:IPR036332" FT /db_xref="UniProtKB/TrEMBL:J9QPI6" FT /protein_id="AFQ55380.1" FT /translation="MLRFVTKNSQDKSSDLFSICSDKGTFVAHNRVRTDFKFDNLVFNR FT VYGVSQKFTLVGNPKVCFNEGSSYLEGIAKKYLTLDGGLAIDNILNELKSTCGIPGNAV FT ASHAYNITSWRWYDNHVALLMNMLRAYHLQVLSEQGQYSAGSYPMYHDGHVKIKLDTPI FT SEDDAPDSFKWPSDRTTDTYPDWAQFSESFPSIDVPYLDVRPLTVTEVNFVLMMMSKWH FT RRTNLAIDYEAPALADKFAYRHAITVQDADEWIEGDRTDDQFRPPSSKVMMSALRKYVN FT HNRLYNQFYTAAQLLAQIMMKPVPNCAEGYAWLMHDALVNLPKFGSVRGRYPFLLAGDA FT ALIQATALEDWSAIMAKPELIFTYAMQVAVALNTGLYLRRVKKTGFGTTVDDSYEDGAF FT LQPETFVQAAIACCTGQDAPLNGMSDVYVTYPDLLEFDTITRVPVTVLEPEGYNIQDGA FT LEVTGVPIACSPYMIFPVAAFDEANPYSGSFVIKPALKYLRKGALYAKLEAWKLAWAMR FT IAGYDTEFKACGNTHGLSKFYADNSDSWTHIPEFVSDEEVTEVYVTNIERRARHFVELP FT RLNSPAFFKPVEVSTAIYDTYVQAGTFSVYHASRINLDYVKPVSAGIQVINAGELRNYW FT GSVRRTQQGLGVVGLTMPAVMPTGERTAGTAHEDLIEQTENVSVE" XX SQ Sequence 4580 BP; 1342 A; 970 C; 1090 G; 1178 T; 0 other; gaaaaatttg aataatcata taactcccca tgcttagatt cgttaccaaa aactctcaag 60 acaagtcctc cgatttattt tctatttgct ctgacaaagg tacttttgtt gcgcataata 120 gggtgaggac tgactttaaa tttgacaact tagtttttaa tcgagtctac ggcgtgtcac 180 aaaagttcac cctagtcggc aacccgaaag tctgtttcaa tgagggaagt tcgtacttgg 240 agggtattgc aaagaaatat ctgaccttgg acggtggcct ggccattgat aacatcctca 300 atgaattgaa atcaacatgt ggtataccag gtaatgctgt cgcttctcat gcatacaaca 360 ttacgtcttg gagatggtac gataatcacg tggcattact catgaatatg ttacgtgcgt 420 accatcttca agtgttatct gaacaaggcc agtattctgc cggttcatac cctatgtacc 480 acgatgggca tgtcaaaatt aaacttgaca ctcctatcag tgaggatgat gctcctgact 540 catttaagtg gccgagtgac cggacaacag acacttaccc agactgggct cagttctcag 600 agtccttccc gtctattgac gtcccatact tagatgtcag gccacttact gttaccgaag 660 ttaattttgt gttaatgatg atgagtaagt ggcaccgtcg gactaacctt gctattgact 720 atgaagcgcc ggcgctggca gacaaattcg cctaccgtca cgccattacg gtccaggatg 780 cagatgaatg gattgaaggt gataggacag atgatcagtt tagaccacct tcttctaagg 840 taatgatgtc ggcattgcgt aagtatgtta atcataatcg actttacaac cagttctata 900 cggccgctca actattagct cagattatga tgaaaccagt acctaactgc gctgaagggt 960 atgcatggtt gatgcacgat gctctggtca acttgccgaa gttcgggtcc gttagagggc 1020 gttacccgtt cttacttgca ggtgacgctg ccctgattca ggcaacagca cttgaagact 1080 ggtcagcaat tatggctaag ccagaactga tttttaccta cgctatgcag gttgctgtcg 1140 cgttgaacac tggcttatac ttacggaggg tcaagaaaac tggtttcggt accactgttg 1200 acgatagtta tgaagacggc gcatttctac aacctgagac cttcgtacaa gctgcgatag 1260 cttgctgcac tggccaagat gcaccgctta acggtatgtc tgatgtgtac gtgacatacc 1320 cagatctcct tgagttcgat actataacac gtgtccctgt tacggtacta gaacctgaag 1380 gctataatat acaggatggc gccttggaag tgacaggtgt tccgattgcc tgctcgcctt 1440 acatgatttt ccctgtcgca gctttcgatg aagctaaccc ctattctggt agttttgtta 1500 ttaagcctgc gctgaaatac ctacgcaaag gtgctctgta tgccaaacta gaggcctgga 1560 aactggcctg ggctatgagg attgcaggat acgacactga atttaaagct tgtggcaaca 1620 cgcatggttt atccaaattt tatgctgata atagcgatag ttggacacac ataccggaat 1680 tcgttagtga tgaagaagtt acggaagtgt atgtaactaa tattgaacgt agagccagac 1740 actttgttga gctaccaaga ctaaattctc cagccttttt taaaccagta gaggtaagca 1800 ccgcaattta cgatacttac gtacaggcag gcacattctc tgtctaccat gcaagcagga 1860 ttaatttgga ttacgtcaag cctgtatctg caggcataca agtcattaac gctggtgaac 1920 taaggaatta ctggggtagt gtacgccgta cgcagcaggg tttaggagtg gtaggtctta 1980 cgatgccagc cgtaatgcct accggagaac gtacagctgg cactgcccac gaagacttga 2040 tcgaacagac ggaaaatgtt tcagtcgagt aaacataata gaaccatccc atgggcctcg 2100 tccgatgaga tacatattga acgagccaaa tacatacccc gcatggataa ggttcagaaa 2160 tagagtacag gcggtatcta gacagagggc aacacatttc ttatttgata tagtaccggc 2220 cagcaaaatt gcggactata ctacttcaca aacggctact tttgcataca ggtcgcacac 2280 gtatgcatgc acggtaacgg cactacgctt tggagatgac tacggcttgt atgtccaggt 2340 agaggctaac atgacattgt taagtccggc tgcacggcga caagcttctg ctacgtactc 2400 tcaggttgag gggttctgtt ttaacacacc tacggtcatg gacacgctag ctaacatctt 2460 ggatgttgac cgcaatatta gaccaaagca ctttaaaggt ctgcgtactt atgagaggtc 2520 taaggtcaca gcacaacacc acactcactt gcggcctgat gaagtactgg aagcagcggc 2580 acgtgtatcg cctaggcgaa agtactactt attatgcgtc gtagagctat tagcggcatg 2640 cgaggttaac attgaagcag cagtagctac aataatgacg tacgtactca ctttggacga 2700 aaagttcata cctttgtttc tagactcacg gacaatatgg cagggtagta aaggacctga 2760 agaactaaca gccagactca agaaggcgag cgggcagatt aaaagtgttc atacagctga 2820 ctatgagcca ctgacggaac tgtttgaatt ggctgtgctc atgaacagag gcgtcgggca 2880 tgtatcctgg aagactgaaa gagaacacag agagaatccg gatgtagcaa acgttaatca 2940 acaagcactc tacgcgtgcg tacgtgacat gttcgagggg gccaagcaga cttatgatta 3000 tccttacatg acatgggatg actatacgtc aagtcggtgg gaatgggtgc ctggaggaag 3060 tgttcattct cagtactccg aggatgatga atatatattt ccaggacaat atactaggaa 3120 caagtttatt acagtcaaca aaatgcctaa gcataagatc gcgcgtatga tagcatctac 3180 gcctgaagtt agggcatgga cctcaacgaa gtatgaatgg ggtaaacaaa gagctatata 3240 tggcacagac ctacggagca cacttatcac taacttcgct atgttcagat gtgaagatgt 3300 gttaacacat aaatttcctg taggtgatca agctgaagct gcgaaggtcc acaaacgtgt 3360 caacatgatg ctagacggtg catcgagttt ctgttttgat tacgacgact ttaattccca 3420 gcattcaata agcagcatgt acacagtact atgtgctttc agagacgctt tcacacgtaa 3480 tatgtccatt gaacaacgcg aggctatgga ttgggtatgt gagtcagtca agcacatgtg 3540 ggttttagat ccggatacta agacttggta ccaattgaag ggcaccttgt tatcaggatg 3600 gcgactcaca acatttatga acacagtgtt aaattgggca tacaagaagc tggctggggt 3660 atttgattta gatgacgtcc aagattcagt acataacggc gatgatgtca tgattagttt 3720 aaacagagtc agtacagccg ttagaataat ggacgcgatg catagaatca atgctagggc 3780 ccagccggct aagtgtaacc tgttctctat aagcgaattc ttacgcgtag agcatgggat 3840 gagcggaggt gacggcttag gagctcagta cttaagtcgg tcatgcgcca cactggttca 3900 cagccgtata gagtcgaacg agccactatc tgttgtccgg gttatggaag cagacaaaac 3960 gcggctacgg gacttggcta acaggaccaa cattaaagca tcagtaacag aaatagaaga 4020 gcaacttgat cgtagagtca cttcgatatt caaagtggat agagaagtag tcaaagcgat 4080 ttctacagct cacagagtct gcggcggtat atcaaccgac ccgtgggcac cagttactac 4140 aaaaataaag acagacaacg aagcatacga aataccatac gaaatagatg atccatcatt 4200 ttggccaggg gtaaacgatt atgcttataa agtctggcag aatttcggcg aaaggctgga 4260 gtttaacaag attaaagacg ctgtttcaaa gggcagcaga aacacgatag ccttgaaacg 4320 taaggcgaag atttctgcag tcaagaacga cttcgtcaat aaatctgaat gggagagaac 4380 tatgtacaaa gcttacaaag gtttagcagt atcttattat gctaacttga gcaaattcat 4440 gagcatacca cccatggcaa acatagaatt cggacaagct agatttgcga tgcaggcggc 4500 cttagatagt tccgatcctt taagagcact acaaatattc ttatgaagtg ctcgaacgat 4560 gagggttttt acccatatgc 4580 //