ID   JN609292; SV 1; linear; genomic DNA; STD; VRL; 1160 BP.
XX
AC   JN609292;
XX
DT   01-FEB-2012 (Rel. 111, Created)
DT   01-FEB-2012 (Rel. 111, Last updated, Version 1)
XX
DE   Pepper golden mosaic virus isolate 07-3696 coat protein (AV1) gene, partial
DE   cds; replication enhancer protein (AC3) and transcriptional activator
DE   protein (AC2) genes, complete cds; and replication associated protein (AC1)
DE   gene, partial cds.
XX
KW   .
XX
OS   Pepper golden mosaic virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-1160
RA   Castro R., Hammond R., Rojas M., Gilbertson R., Hernandez E., Mora F.,
RA   Ramirez P.;
RT   "Distribution and incidence of viruses transmitted by whiteflies
RT   (Hemiptera: Aleyrodidae) in vegetables of economic importance, Cartago,
RT   Costa Rica";
RL   Unpublished.
XX
RN   [2]
RP   1-1160
RA   Castro R., Moreira L., Rojas M., Gilbertson R., Hernandez E., Mora F.,
RA   Ramirez P.;
RT   "New host range of Squash yellow mild mottle virus (SYMMoV) and Pepper
RT   golden mosaic virus (PepGMV) in Costa Rica";
RL   Unpublished.
XX
RN   [3]
RP   1-1160
RA   Castro R.;
RT   ;
RL   Submitted (23-AUG-2011) to the INSDC.
RL   Centro de Investigacion en Biologia Celular y Molecular, Universidad de
RL   Costa Rica, Ciudad de la Investigacion, San Pedro de Montes de Oca, San
RL   Jose 11501-2060, Costa Rica
XX
DR   MD5; d981bf0561e6944f3a531587817bd72f.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1160
FT                   /organism="Pepper golden mosaic virus"
FT                   /host="Erythrina sp."
FT                   /isolate="07-3696"
FT                   /mol_type="genomic DNA"
FT                   /country="Costa Rica:Cartago Province"
FT                   /collection_date="2007"
FT                   /clone="Po3696"
FT                   /PCR_primers="fwd_name: pav1v722, fwd_seq:
FT                   atatctgcagggnaarathtggatgga, rev_name: pac1c1960, rev_seq:
FT                   tggactgcagacnggnaaracnatgtgggc"
FT                   /db_xref="taxon:223301"
FT   gene            <1..384
FT                   /gene="AV1"
FT   CDS             <1..381
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:H6U632"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:H6U632"
FT                   /protein_id="AEY94446.1"
FT                   /translation="HVGHIVFCLQSTSRPYSTSMDFGQVFNMYDNEPSTATVKNDLRDR
FT                   YQVMHRFSAKVTGGQYASNEQALVRRFWKVNNYVVYNHQEAGKYENHTENALLLYMACT
FT                   HASNPVYATLKIRIYFYDSITN"
FT   gene            complement(378..776)
FT                   /gene="AC3"
FT   CDS             complement(378..776)
FT                   /codon_start=1
FT                   /gene="AC3"
FT                   /product="replication enhancer protein"
FT                   /db_xref="GOA:H2DFC9"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:H2DFC9"
FT                   /protein_id="AEY94449.1"
FT                   /translation="MDSRTGESITVRQAENSVFIWEVPNPLFFRIHRVEAPLDTRTRIY
FT                   HIEVRFNHNLRRQLALHKAFLHFQVWTTSMTASGTTYLNRFKFRVMLYLHRLGAIGINN
FT                   VIRAVRFATDKSYVNYVLEHHEIKFKLY"
FT   gene            complement(523..912)
FT                   /gene="AC2"
FT   CDS             complement(523..912)
FT                   /codon_start=1
FT                   /gene="AC2"
FT                   /product="transcriptional activator protein"
FT                   /db_xref="GOA:H2DFD0"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:H2DFD0"
FT                   /protein_id="AEY94448.1"
FT                   /translation="MLNSSSSTLPSIKAQHRIAKKRPVRRRRIDLNCGCSIFLHINCAN
FT                   NGFTHRGEHHCASGREFRFYLGGSKSPIFQDTPSRGPVGHQNQDIPHRSPVQPQPTPTV
FT                   GSPQGIPSFPSLDDFDDSFWDDIFK"
FT   gene            complement(854..>1160)
FT                   /gene="AC1"
FT   CDS             complement(854..>1160)
FT                   /codon_start=2
FT                   /gene="AC1"
FT                   /product="replication associated protein"
FT                   /db_xref="UniProtKB/TrEMBL:H6U635"
FT                   /protein_id="AEY94447.1"
FT                   /translation="VYSNDVEYNVIDDITPHYLKLKHWKELIGAQRDWQSNCKYGKPVQ
FT                   IKGGIPSIVLCNPGEGSSYIAFLNKEENAPLRAWTQKNAQFVILHAPLYKSTAQDS"
XX
SQ   Sequence 1160 BP; 300 A; 249 C; 272 G; 339 T; 0 other;
     catgtgggcc acatcgtctt ctgtctgcag tcaaccagta gaccatatag tacctctatg        60
     gatttcgggc aggtgttcaa catgtatgac aacgagccca gtacagccac tgtaaagaac       120
     gatctgcgtg atcgttacca agttatgcac aggttctcgg ctaaggttac aggtggacag       180
     tatgccagca acgagcaggc gttggttagg cgattttgga aggtgaacaa ctacgttgtc       240
     tacaaccatc aggaagctgg caaatacgag aatcatactg agaacgccct cttattgtat       300
     atggcatgta cgcatgcatc taaccctgtg tacgcgacat tgaaaattcg aatctatttc       360
     tatgattcga taacaaatta ataaagtttg aattttattt catgatgctc aagtacataa       420
     tttacatagg atttgtccgt cgcaaagcga acagctcgaa ttacattgtt tatgcctatg       480
     gcccctagtc tatgtaaata caacatgacg cgaaatttga atctatttaa atatgtcgtc       540
     ccagaagctg tcatcgaagt cgtccagact tggaaatgaa ggaatgcctt gtggagagcc       600
     aactgtcggc gtaggttgtg gttgaaccgg acttcgatgt ggtatatcct ggttctggtg       660
     tccaacgggg cctcgactcg gtgtatcctg aaaaataggg gatttggaac ctcccaaata       720
     aaaacggaat tctctgcctg acgcacagtg atgctctccc cggtgcgtga atccattatt       780
     tgcgcagttg atgtggagga agatagagca gccgcagttt aggtctattc gtcgtctgcg       840
     aacaggtctc tttttagcta tcctgtgctg tgcttttata gaggggagcg tggaggatga       900
     cgaattgagc atttttttgt gtccacgctc tcaaaggtgc attttcctct ttgttgagga       960
     aagctatata gctgctacct tcccctggat tgcacagcac aattgatggt atcccgcctt      1020
     taatttgaac tggctttccg tatttacagt tggactgcca gtccctttgg gccccaataa      1080
     gctctttcca gtgtttcaac tttagataat ggggcgtgat atcatcaatg acgttatact      1140
     ccacatcgtt tgaatagacc                                                  1160
//