ID   JN604019; SV 1; linear; genomic DNA; STD; VRL; 1150 BP.
XX
AC   JN604019;
XX
DT   03-SEP-2012 (Rel. 114, Created)
DT   03-SEP-2012 (Rel. 114, Last updated, Version 1)
XX
DE   Potato Yellow Mosaic Virus Colombia [Valle del Cauca:Tulua 6: 2008] AC1 and
DE   AV1 genes, partial cds.
XX
KW   .
XX
OS   Potato Yellow Mosaic Virus Colombia [Valle del Cauca:Tulua 6: 2008]
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-1150
RA   Lopez-Lopez K., Vaca-Vaca J.C., Betancur J.F.;
RT   "Genetic diversity of begomovirus tomato in Colombia";
RL   Unpublished.
XX
RN   [2]
RP   1-1150
RA   Lopez-Lopez K., Vaca-Vaca J.C., Betancur J.F.;
RT   ;
RL   Submitted (22-AUG-2011) to the INSDC.
RL   Facultad de Ciencias Agropecuarias, Universidad Nacional de Colombia,
RL   Carrera 32 Chapinero via Candelaria, Palmira, Valle del Cauca, Colombia
XX
DR   MD5; bceb11c94a344414f44b48fc6a301b7d.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1150
FT                   /organism="Potato Yellow Mosaic Virus Colombia [Valle del
FT                   Cauca:Tulua 6: 2008]"
FT                   /host="tomato"
FT                   /mol_type="genomic DNA"
FT                   /country="Colombia:Tulua, Valle del Cauca"
FT                   /isolation_source="field-grown tomatoes"
FT                   /collection_date="Dec-2008"
FT                   /db_xref="taxon:1200669"
FT   CDS             complement(<1..695)
FT                   /codon_start=1
FT                   /product="AC1"
FT                   /note="replication-associated protein"
FT                   /db_xref="GOA:J7FCT2"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:J7FCT2"
FT                   /protein_id="AFM85207.1"
FT                   /translation="MPRKGSFSIKAKNYFLTYPQCSLSKEETLSQLQNLTIPVNKKFIK
FT                   ICRELHENGEPHLHVLIQFEGKFNCTNNRLFDLVSPTRSTHFHPNIQGAKSSSDVKSYL
FT                   EKDGDTIEWGMFQIDGRSARGGQQTANDAAAEALNSGTKEEAMKTIKEKLPEKFLFQYH
FT                   NLSSNLDRIFMVTPAPWVPPFPLSSFTNVPDVMQEWADDYFGRGAAARPDRPISIIIEG
FT                   DSRTGKTMWA"
FT   CDS             1008..>1150
FT                   /codon_start=1
FT                   /product="AV1"
FT                   /note="coat protein"
FT                   /db_xref="UniProtKB/TrEMBL:J7FDM2"
FT                   /protein_id="AFM85206.1"
FT                   /translation="MPKRDAPWRSMAGTSKVSRNANYSPRSGFGPRINKAAEWVNRPMY
FT                   RKP"
XX
SQ   Sequence 1150 BP; 278 A; 253 C; 273 G; 346 T; 0 other;
     gcccacatcg tctttccagt tctagagtca ccttcaatga taatactaat aggtctgtct        60
     ggccgcgcag cggcacccct tccaaaataa tcatctgccc actcttgcat cacgtcggga       120
     acgttcgtga aagaggagag tggaaacgga ggaacccatg gtgccggagt caccatgaaa       180
     atcctatcga ggttactgga taggttatga tactgaaaaa gaaacttttc cggcaacttc       240
     tctttgatgg ttttcatggc ttcttccttc gttccagagt ttaatgcttc ggcagctgcg       300
     tcgttagctg tttgttgacc gcctctggca cttcttccat caatctggaa cattccccat       360
     tcaatggtgt ctccgtcttt ctcgaggtat gacttgacat cggagctcga tttagctccc       420
     tgaatgttcg gatggaaatg tgttgacctg gttggggata ccagatcgaa caatctgttg       480
     tttgtgcagt tgaatttccc ttcgaactgg ataagaacgt ggagatgagg ttccccattc       540
     tcgtgaagtt ctctgcagat cttgatgaat ttcttgttca ctgggatagt taggttttga       600
     agttgggaaa gtgtctcctc tttgctaaga gagcattggg gatatgtaag gaaataattt       660
     ttggctttaa tagagaacga gcctttgcgt ggcatttttg taaataagaa tgttcccccg       720
     atatgttccc cctattgctc tggctctcaa aactcttatg aattggggga actgggggaa       780
     catatatagt agaaattcct atggttagat tcgccacgtg gcggccatcc gttataatat       840
     taccggatgg ccgcgctttt ttcctcttat gggccttact tgtagtgggc tttaatttgg       900
     cccaatcata gtctgtctga caatactaga taggtggaaa tacttgggcg ttaaggtgct       960
     catgatctat aaattaaagc cttttggccc actatcttta actcaaaatg cctaagcgcg      1020
     acgctccatg gcgttcaatg gcgggaacct caaaggttag ccgcaacgct aattattctc      1080
     cccgttcagg atttgggcca agaataaaca aggccgctga atgggttaac aggcccatgt      1140
     acaggaagcc                                                             1150
//